Array 1 3426420-3425842 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP007133.1 Escherichia coli O145:H28 str. RM12761 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   3426419	    29	 100.0	    32	.............................	GCCATCAGCTATAACACGCGCCGCTTCATCAA	
   3426358	    29	 100.0	    32	.............................	CGCAGGTCGGCGAGCATGTTGCCGGGTTCGGG	
   3426297	    29	 100.0	    32	.............................	ATAAAAACCATTTGTCAGAAGCGGAAAAAATC	
   3426236	    29	  96.6	    32	............T................	AATCAGGGCTGCGCGCAGTGTGTGCGTGGGTC	
   3426175	    29	 100.0	    32	.............................	AGGATGCTGGCAAGCCTGCCATTTTTCGTGCA	
   3426114	    29	 100.0	    32	.............................	AGGATGCTGGCAAGCCTGCCATTTTTCGTGCA	
   3426053	    29	  96.6	    32	.......T.....................	CCGACTGATAAATCCACCTCATGGCAGGTCTC	
   3425992	    29	 100.0	    32	.............................	TTTTAACCCTCAAAAACGTATGGCTTTGGGTA	
   3425931	    29	  96.6	    32	.T...........................	GGCGCACTGGATGCGATGATGGATATCACTTA	
   3425870	    28	  75.9	     0	..A........C..T....T-.G.....C	|                               	C [3425845]
==========	======	======	======	=============================	================================	==================
        10	    29	  96.6	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CGTGCTTGCTGCTGGGGAAATACAGCCGCCGGCCCCACCTGAAGATGCGCAGCCTGTTGCTATTCCACTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGCTGGAAGTCCGTGCAGGAGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATATCCGGACTGGCGGAGGAGGGCAATGTAGTGATGGCATGGGCAACGAATACAGAATCGGGATTTGAGTTCCAGACATTTGGAGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTTTTTAAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATCAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA
# Right flank :  AGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGTGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACATCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTTTCGGTGTCACTCATCCGCTT

# Questionable array : NO	 Score: 6.09
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//