Array 1 7011-5338 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTN010000059.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 700280 NCIMB700280-i1-1_scf59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 7010 36 100.0 30 .................................... AACCCAGGTCGAAAATCACCGGACCATCTA 6944 36 100.0 30 .................................... AACCAGGTCGACTCTTTCGCGGATTTTGTT 6878 36 100.0 30 .................................... CAGAGATCATCATGTTTCCTCTTCTGAGCG 6812 36 100.0 30 .................................... ACTTGCATGGGTTAAAGGCCTGTAAGGGGC 6746 36 100.0 30 .................................... TCGTGACGGACAAGGCAGACGAACTTAAGA 6680 36 100.0 30 .................................... GCCAAGATGGACTCAATCGTTTCTGGTGTT 6614 36 100.0 30 .................................... CTAAGGAAATTGTGCAAAGTGGTATCGTTG 6548 36 100.0 30 .................................... CGTTGTGGGACCACGATCGTGCCGTAATGG 6482 36 100.0 30 .................................... GCATTATCTTTAATGGCGCGACTGCAAAAA 6416 36 100.0 30 .................................... GCATAGTAAAGGAATCGGCTCTTGTCTTTA 6350 36 100.0 30 .................................... TCGTTCCACGAAGGATATACAGTAAACTTC 6284 36 100.0 31 .................................... TTGAGCCCTGGCTTAACTTGAGCAAGCGACC 6217 36 100.0 30 .................................... TCCAGCTCCTTAGACATCGTAAACAAGTCC 6151 36 100.0 30 .................................... CTGAGTTTTGATCTTGCCGCCCTGGACGTT 6085 36 100.0 30 .................................... CCTGCCTTTCTGATTGCTGTCTTGATTCGC 6019 36 100.0 30 .................................... TGAGTACGCTTACAGCTTAGGCTTGGTACT 5953 36 100.0 30 .................................... GCATTATCTTTAATGGCGCGACTGCAAAAA 5887 36 100.0 30 .................................... GCATAGTAAAGGAATCGGCTCTTGTCTTTA 5821 36 100.0 30 .................................... CAAAAGCTAATAAATTGGCTGATTGCTGAC 5755 36 100.0 30 .................................... ACTTTCGGGTTTCGTTCAACCCTTGATACT 5689 36 100.0 30 .................................... GAGGTTAGTTATGCAAATTTCATCAGAAAA 5623 36 100.0 30 .................................... TAGCTAGAGCGGATATCAAAAATACTTCTA 5557 36 94.4 148 ................C...T............... GTTGTGTAGGTTCAAATCCTGTACTCTCCTTGTTTTGGAATATTTCCATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTACTCATTCCACGCAGGTGGGGGTGATC 5373 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 24 36 98.7 35 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACTGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATACGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTAAATTAAAGCTGTGTTAAAAAACAACG # Right flank : TGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAACGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCACGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGGC # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.44, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //