Array 1 9453-9743 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNOP01000011.1 Acidaminococcus fermentans strain WCC6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 9453 31 96.8 34 ............A.................. TGACCCAGGCCGTTGCACCGAAGGACGTAAAGAA 9518 31 100.0 35 ............................... GGGAGCCACCAGGCAACGGCAATACATGGTCAGGC 9584 31 96.8 33 ...................A........... GGAACAGACGAAAAAATAAAAAAACCTGCAATG 9648 31 96.8 34 .....T......................... TCTGATACAGATCTGATTACTGCGTCCCAGCAAG 9713 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 5 31 98.1 34 GTCGCCCCCGTATGGGGGCGTGGATTGAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTCGCCCCCGCAAGGGGGCGTGGATTGAAATTCTTTCGGATCAACATCCGCTTTTACAGCTTC # Right flank : TTCGTATGGTAATCCGGCGGGGAACCTTCGCGGGTGGATGGGTATAGGTCTTTTTGCCTTGACAGAACCCCCTACCCGCTGACGCGGGTCCTTTCCCCCTTTCAGGGGGACACAGGTAGGGACGGGCGTCTGGCGGGGCGCCGGGCCTGCGCCCCCTACGGCGTTGGCATTGGAGGGACGGGGGATTAGGCGGGGCGCCGGGCCTGCGCCCTCTACGGCGTTGGCATTGGAGGGACGGGCGTCTGGCGGGCTGCCGGGCCTGCGCCCCCTACAGTCTGTGCCGTTTCACAATGGGACGTGGATTGAAATTGTATACAAAAATCTGTTATAATAGCCTCATGCTTACAAGTTACTGGAACAAAGTGTATTCCAGTAGAAGAAACGAGGGGAAGTTATGGGAAGTATTGTATCGTTGACGGTGCTTTTTTGCATTTATGCGGTCAGTGAGCTGATCGCCATGCGCACCCGGGCCATCCTTTCTACGGTGCTGGGGATTTCGG # Questionable array : NO Score: 8.88 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGTATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : NA // Array 1 31013-30461 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNOP01000003.1 Acidaminococcus fermentans strain WCC6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 31012 31 93.5 36 A.......................G...... CAGAAAGAATTGGGTACTCCCAAGATGGTTAAAGAT 30945 31 100.0 35 ............................... ATCGACAGCTATTAGGCAGTGCGAGTCCAGCTGTA 30879 31 100.0 33 ............................... GATCCGATCGGAAAAGACAAGCCTCACAACAAC 30815 31 100.0 33 ............................... CGGCAGTGGCCACCTGGTCAGCGTTGACGGTGG 30751 31 100.0 34 ............................... CCGTTCCTGGGCATCCAGAGCCCGACCGAACACC 30686 31 100.0 34 ............................... CCGCCAAAACACCAGGCTGTGGCGCATGCGTAAG 30621 31 100.0 34 ............................... CGACAGCAAATAATCCCATTGCTATTTTGTTGGG 30556 31 100.0 34 ............................... AGCCAGACCATCGCTCCGATTTTAGAGCAATACG 30491 31 96.8 0 ...................A........... | ========== ====== ====== ====== =============================== ==================================== ================== 9 31 98.9 34 GTCGCCCCCGTATGGGGGCGTGGATTGAAAT # Left flank : ATACAGGACTGCACGTCCCAAAGTCCGCCCCGGGAGGGGCGGGGGACCATGCGCAGCATGGTGGTGGGGGCATCGGCGCCAGCCGATACTTTGCAGGAATCTTGTACAACAGAAGAACATGGTACAGCAGTACGGTATAATATCCAAACCGGACAATCTGACGTCTTTATCAACTGTCGCGATGAACGATATATCTTTAAATCAGGCGTTTTTTTACACCGGGAATATGGTATAGTAGAAGAAAATATCATCCTCTTCCGTTATCTATAGCTTTTCGACAACAGAGAACTTCCCCATATAGGGAGAATGGGAGACCATCATTATCGTTCTCGCGGGAGTCAAACAGACCTACAATCTGGAAGCTTCCATAATCCTGCAAGTGCGAGAGGGAAGCGAACAGAAAGAACAAGCATCTGGAAACGGGAACTGGAAAATCTGGAAATCGCCTTTCGCGGAAAAAGATGGAAGAACTTGAGAAACTCAAGCTGGCCCGTCTGATA # Right flank : TCGTATGGTAATCCGGCGGGGAGCTTTTGTGGGTGGATCGGTATAGGTTTCTTTGCCTTGACAGAACCCCCTACCCGCTGACGCGGGTCCTTTCCCCCTTTCAGGGGGACACAGGTAGGGACGGGCGTCTGGCGGGGCGCTGGGCCTGCGCCCCCTACGGCATCGCAATGGGTCAATGATGAAGGGTTTACCGAGAACCTGTTGATACAGACTTCCCCGCCCTTTTCCTTCATTTCCCCGGGTTTTTATGGTAAAATGAAAATTATATCCAAATACCCACTCTGTTGTGCAAAAGGAGCCTCTTTATGTCCCATACGGCCTTTTCGGAATCCGATCCCGATTCCTTCATCCATCATCACCTGAATTATTTCCTGCCCACCATCTATACCATCACCGACTGGGTGATGATCCTGCTGGCGGAATTCCTGGCGTACCACCTGCGGGGGGCTGTTACCGGGAACACCCATTTCCACATGCCCTGGCTGAACTTCTGGGTGGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGTATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : NA //