Array 1 43533-40321 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELT010000017.1 Acinetobacter baumannii strain MRSN32938 MRSN32938_contig00017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 43532 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 43472 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 43412 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 43352 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 43292 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 43232 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 43172 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 43112 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 43052 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 42992 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 42932 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 42872 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 42812 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 42752 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 42692 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 42632 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 42572 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 42512 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 42452 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 42392 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 42332 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 42272 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 42212 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 42152 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 42092 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 42032 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 41972 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 41912 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 41852 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 41792 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 41732 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 41672 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 41612 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 41552 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 41492 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 41432 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 41372 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 41311 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 41251 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 41191 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 41131 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 41071 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 41011 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 40951 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 40891 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 40830 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 40770 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 40710 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 40650 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 40590 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 40530 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 40470 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 40410 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 40350 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //