Array 1 150609-145397 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACZDR010000015.1 Bifidobacterium dentium strain 70T2 Contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 150608 36 100.0 37 .................................... TATCATATACTTGTAGTTACAAGGCAGGAAGCAATAA 150535 36 100.0 36 .................................... GGCTCTCGGCATCAGGCCGGACGGTGACAATCAGGG 150463 36 100.0 36 .................................... TCGGAGAGTGGGCCGTCACCGGCTTCACGTTGGGTG 150391 36 100.0 37 .................................... GGTTCGCAGATTCGGTTTGCGGTGGTATGGCGTCCCG 150318 36 100.0 38 .................................... AAATCGTACAAGAACGTAAACGGCACCAAATCCCACTG 150244 36 100.0 36 .................................... ACGAACCTCACGTATCACCTTTTCGAGTATGAGTTT 150172 36 100.0 38 .................................... GTCAGTACGAGATAATCGGAACTGAGAATTAGCAAGCC 150098 36 100.0 35 .................................... ATCAGCAACGACCGATTGAACATTAACAATGCTGA 150027 36 100.0 36 .................................... CACATAAAAAATGCGGGTTGACGTGAGGTATAACGT 149955 36 100.0 36 .................................... CGCAAGGCCGCACTCGGCATCGAAACGGAAGAGGCC 149883 36 100.0 33 .................................... CGGACCGTCGGAGCAGAACGGGAACGGGCTGGA 149814 36 100.0 35 .................................... TGGATGAATGTTTCGGACAACCATACGACTATCAG 149743 36 100.0 35 .................................... CGTCACAATGTGCGGTGCAGTGTTCCAGGCTGTGA 149672 36 100.0 34 .................................... TGTACGTGCGCTTCATGCCGCATCATGCTGGATT 149602 36 100.0 34 .................................... ATGGCCAATGCGTTGACGATGTTTCATCTGAGCG 149532 36 100.0 35 .................................... AAGCATGCCGAAGACGAACTGCCACAGCTCGCCGA 149461 36 100.0 37 .................................... GTGATGAAGACACAGACGTTCGCGGAATACGCGCGCA 149388 36 100.0 37 .................................... TCGATGCCTGCACCTGAAGCCGTACCGTGGTGTGCTC 149315 36 100.0 34 .................................... CAGTCGGATGCATGATGTCTCTCACTGGCTTCTC 149245 36 100.0 34 .................................... CAGTCGGATGCATGATGTCTCTCACTGGCTTCTC 149175 36 100.0 36 .................................... CACCGACACCGAATGCCTGGTAGGTCATGTCGTCGG 149103 36 100.0 35 .................................... TACATTGTCAGGCGTAAATATACCGGAAAAAGCGA 149032 36 100.0 37 .................................... TGGAACGTGCACGAACTCCCGGCTCCGCCATTACGTC 148959 36 100.0 37 .................................... CAGAGGCTCTTGAATCCGTGTGGGGCGACATGGCGAT 148886 36 100.0 39 .................................... CTCACCTTCGATGTCGTCGATGTAAGGAGAGCGCTTCCG 148811 36 100.0 35 .................................... AAGACCACCGTGTCCGAAACGTACACGTCTAAGAC 148740 36 100.0 36 .................................... GGCGTCAAATGCGAGCGCCGATGCCGCAGGGAGACG 148668 36 100.0 38 .................................... AAGCAAGCTTGGGAGTGACCAATGGGCAAGACCCTGCA 148594 36 100.0 36 .................................... TGCGGCGGGCAAGGCCCAGACTACTGCGAATACTGC 148522 36 100.0 38 .................................... CGCTTCCATTTGCCGCTGTTCCAGACGAATGAGGAAAA 148448 36 100.0 37 .................................... TTGGTCTCCGGCACCCTCTACGTGTGGGATGTGGAAA 148375 36 100.0 38 .................................... AGGCGGTTATGGTGCGATGCAGGTCATGAGTGAGGCGA 148301 36 100.0 34 .................................... TTGAACAAGAGCACGAGAACGGCAAGGGTAAGGA 148231 36 100.0 36 .................................... AGCCTGTGCGAAAGTCATCTGATCGTGCAGAGTGAG 148159 36 100.0 34 .................................... TCGTACCGTCAACATGAACATCAGCATTCCTGAA 148089 36 100.0 35 .................................... GGTGATGGTGAGGTGCGTGTCATCATCGTGGACCA 148018 36 100.0 36 .................................... TTCGCGGACGTCACGGAAAAGGTGGATAATGATGAG 147946 36 100.0 34 .................................... TCCGTCCTTCGATGGCGGGGGAGGATTTCTGCGA 147876 36 100.0 36 .................................... ACGAGTATTACGAACGGCATGACAGGGAACGGTTGG 147804 36 100.0 36 .................................... ACGAGTATTACGAACGGCATGACAGGGAACGGTTGG 147732 36 100.0 35 .................................... TACTACAGCGACGAACCGTTGGCTATCAAACCGGT 147661 36 100.0 36 .................................... CCGTCTCAGATCGCTCGCCTGCCGTCGCGCCGCCGA 147589 36 100.0 35 .................................... GCGAGGATTATCAGACTCTCGCCATCGCCATCGCC 147518 36 100.0 36 .................................... ATCTCCAATGACCGCCTGAATATCAATAATGCTGAC 147446 36 100.0 36 .................................... GCGAATCCAGTCCGTCAGCTCGAACGCTACATCACC 147374 36 100.0 37 .................................... TTGAGACTTGTTTTCGGACGCATGCTGAGACTGGCCG 147301 36 100.0 34 .................................... CGGTCAACGTGCATCGAAGCGGATACGAGGTCGA 147231 36 100.0 38 .................................... GTATCGTTCACGCTTCCTAGGCGCGTTCTGGCAGGCAC 147157 36 100.0 37 .................................... AGGGGGTGACATGAGTACCGTCATCAATTTCAACGAC 147084 36 100.0 35 .................................... GATGACGAGTCCTGTGCCGTGACGGAGGACATGCT 147013 36 100.0 34 .................................... GACCGCACGTGCGCGCACGAGTACCACACGACAC 146943 36 100.0 36 .................................... TCACATCCGTACAGAACCGTCACAACCGATGGCACA 146871 36 100.0 35 .................................... CCACAATGTACGCTCGCCAAGCCATATCCGACTCC 146800 36 100.0 38 .................................... GTGAATATCTCCGGCGGGACCGCGAAGGTCGGCCCGAA 146726 36 100.0 35 .................................... TCCGCAGACCATGCGGAACTGCATTTGAACGAATT 146655 36 100.0 33 .................................... GCATGTGGTTCGCGTCAGTGTCGGAGAGCGAAG 146586 36 100.0 36 .................................... AATTGGCATGTGGATCGATGAGATGATGATGTCATC 146514 36 100.0 39 .................................... TGTTCCGACCTGTGCAAGAATTGTGGACACGGCGATGAC 146439 36 100.0 36 .................................... TTCGCACTCACCGCCTACACACGTTCGCTCTTTCAC 146367 36 100.0 38 .................................... CAGAAGTATCGGAAGCTCGCGGAAGACCAGAAGGCCGA 146293 36 100.0 34 .................................... GAGCCGGGCGGCACCCTCTGATGACCGGCGCCAG 146223 36 100.0 36 .................................... GACTATGATTGCGCCGACCTGAAACTGGCTGATGAA 146151 36 100.0 37 .................................... AGGATGTCGCGTATGGTGTCCTCGTTGTAGCCGTTGA 146078 36 100.0 39 .................................... TTACGACCACGCTGGATGCCTCGGCGCTGCCACAGGGAT 146003 36 100.0 35 .................................... AGTCAATTCGGTATCTGCAATCATTTTAGCGACGG 145932 36 100.0 35 .................................... AGATCGGCGTCACCGACTACGGCGACAACGAACCA 145861 36 100.0 36 .................................... GTGAAACCGGAGGTGGCGGATGGCGTACGGTCAGAT 145789 36 100.0 34 .................................... CCCGCCAATGCGAACGTTGTCGGCGGAACGTATG 145719 36 100.0 38 .................................... CGGGCGAAAATACTGCCATCGAACATGCCACCGGTGTA 145645 36 100.0 35 .................................... TCGAACACGATCGCCGGCATCAACGCGCAAGTCCA 145574 36 100.0 35 .................................... AAGAGGGCGCGCAAGTATGGTCTCGGCGTGACCGG 145503 36 100.0 35 .................................... ACGTATTTCCCGTTCATGGGCACCCTGAACAAGAT 145432 36 77.8 0 G..T....A.G.C..........CT.........A. | ========== ====== ====== ====== ==================================== ======================================= ================== 73 36 99.7 36 ATTCCTGAGCAGTAATGCTCAGGACTTCATTGAGGA # Left flank : CGCTTATGATATCAACGATGATCGCCGGCGTAGTCATGTGGCAAAAATACTGCAACGCTGCGGTGAACGATTGCAATACAGTGTGTTTTTGCTAAGAGTGCGTCCATCAAAGATGCTTCAGATTCAGAATCTGCTTGAGTGTGAAATTGATGGATCCTGTGATTCCGTGGTTGTTTGTTTCCTTGGGAAAGAGGAACAAGCGAAAGATGGGATGAACTTTCTTGGCAGGCGTGGGTATAACGATTTGGATATTCCTACTGTCATTTAGCGGTTTTATCACATATGGAAATGTTGTTTGAAAACTAAAGAGTGTGTCATGCTGATTCTTGATATGCGAGAGCTGAATCGGTGGAAATGTAAAGTGGTAGCGCTCGCACCATATAGGATAACGACTCATATGTGTTTGCATCGTAAATGATGGTTGTTCAAGTGTGTGACTACAGCGAGTTCTCGCAAACCTCTTGATTGAGCTAATCGATAGGCTGAGTTAGAATGAGGCC # Right flank : CGAGGCCACAGTTGATGAGGATGCTTCACATTCGGATTCAGTGGGCTCGTCATGCTGTGCTAGCACTGGATGCATCCCATAAATTGGAGTGCCTCATCCAGTTGAGCGGTTAAATCTCCGTCCAGCTCAGCAAAGAGACAAACCTCGATAAAGGCTGCAGGGCGATTAACGCGGCGTACTCTTCGTGGAGTGCATCAATGCGGCAGACAGGCATTTTCATGCCTCGAGGTTGTTCATTTAACCAATTCAGCCAGAATTACACAAACGCAGAGCTCACCCATGCCTCGTCTTGAAACACTCTTCGTCACCATTAATACCTAGAAAAGGAAATGGTCGGGATATGGAACCCGATCCAGACAAATACCATTCCTCAACGAATAGGCTCATACGTGGCGTGGCGTAACCGCATCCTGCGGGCTGCGCTACACTGGGGTGCGGCTCGTCATCTCGATGAGAGGACGAGCACGGTGATGGCGAGTATGAGCATAGTCGCATGCGTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCAGTAATGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //