Array 1 1025081-1021993 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP078519.1 Shewanella algae strain CCU4054 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1025080 28 100.0 32 ............................ GAAGTCGAATTGCTCAGCCAGTCTGATCAATA 1025020 28 100.0 32 ............................ TCCTACAAGCCGTGGCGGCACTGTTTACTGGG 1024960 28 100.0 32 ............................ ATTAGATGCACCCCTCTACGAACTGCTGAAAC 1024900 28 100.0 32 ............................ AAGCCTTGCGGTCACCGGCTACTTCCAGAGTC 1024840 28 100.0 32 ............................ ATGTTCAGCAACTGCTGACGGTGTGACGCACG 1024780 28 100.0 32 ............................ GCTTACCTTCTCCCACAACACGACATCCGTAT 1024720 28 100.0 32 ............................ ACTAATGAGAAGATAGTTTTTAGGACAGCTGC 1024660 28 100.0 32 ............................ TTGGCGGCTTTAACCACGGCCATGTATGCAAT 1024600 28 100.0 32 ............................ ATTGAGGATTTAACCGCTGCGGTAAGCAAGGG 1024540 28 100.0 32 ............................ ATTAATCATGACCCTAACCTCACAAAAGGTAT 1024480 28 100.0 32 ............................ TGGGACGGCCGGCACCCTTTCGAGCACCACCA 1024420 28 100.0 32 ............................ CTTATGAAAGCCTTCCTTCTTCTTGGTCTACC 1024360 28 100.0 32 ............................ TTGGCGCTGGCTTGGTTGCCGCGCTCGATGTA 1024300 28 100.0 32 ............................ CTGCATTTGATATCGCTGCGGCTGTGCAATCA 1024240 28 100.0 32 ............................ TTTAGGCTGTAAACACTGTTTCAATACAGGAC 1024180 28 100.0 32 ............................ GGTCATTGCTTGCTGAATGGACTTCATACAAC 1024120 28 100.0 32 ............................ AACAGGGTCAACATATGTTCCAAGCACCAAAC 1024060 28 100.0 32 ............................ AAATGCAAATCGCCGTTGAAATCCTCTGATTT 1024000 28 100.0 32 ............................ AGTAAGGTAATACTGGACTTTTGTCTCACCGG 1023940 28 100.0 32 ............................ CGCCCCAAGTAAAAAAAAGTGGCGGCCTTTAG 1023880 28 100.0 32 ............................ TTCATACTCCGGCAATTCATCGTCATTTTGCT 1023820 28 100.0 32 ............................ GTGCCAATAGATTCCAAGGTCTTGAATCTGAG 1023760 28 100.0 32 ............................ AAACACTACTGCGAGAGTGTTTGGGATGTGGA 1023700 28 100.0 32 ............................ AGACTAAATCAAAGGCATTGCTTTACATGCTT 1023640 28 100.0 32 ............................ AACAGACTTCAATCATGTCCTTAAGATCACGA 1023580 28 100.0 32 ............................ TGACAACTCCCCTGAATCGCTCAAGCGAAAAC 1023520 28 100.0 32 ............................ AACGAAGAGTCAAACGGATGGGCCGCCAAGAT 1023460 28 100.0 32 ............................ ATCATTGAATCGAACCCATCCGCTAACTGCCG 1023400 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 1023340 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 1023280 28 100.0 32 ............................ TAAAGTATCCAATCCGACCAAGCAGGAAGCCA 1023220 28 100.0 32 ............................ GTAACGGAAGCGCCAAAAACTGAACCCGTAAC 1023160 28 100.0 32 ............................ CATCGGCGAACATCCAGCATTGCTTGTTGGGC 1023100 28 100.0 32 ............................ GCCGTCACATTGCAAAATTGGGGGCGGGGAAA 1023040 28 100.0 32 ............................ ACTGGCGCGGGCTGAACTTTCAGCACCATGTG 1022980 28 100.0 32 ............................ CAACCCCTTGTAATCCGGGTTTGGCTCAATAC 1022920 28 100.0 32 ............................ TTTTTCCCAGCGTTGCCAGGTGCGAGGCTCAC 1022860 28 100.0 32 ............................ TCAATAACTTTTCGACGATTGTCACTTTTAAT 1022800 28 100.0 32 ............................ TACGGCCATTTTCTCCACTCGGGTCGGGTCAT 1022740 28 100.0 32 ............................ TGTCCAGGGCTCCAAAGTCTGGCCCATCGTTT 1022680 28 100.0 32 ............................ GCCAGAGTCTCTGATGAGTCGATGCGAAATCC 1022620 28 100.0 32 ............................ AATTCTGAAGGGAACGTGCAGCACAGAGCTAA 1022560 28 100.0 32 ............................ TGGCGATACCAGTGGCACAGGTCGAACCGACA 1022500 28 100.0 32 ............................ AGCAGCCTGCTTCAAAATGTCAGCAGTTGTTT 1022440 28 100.0 32 ............................ ATCATAAGCTGGCGGGACTGCCTCCAAATCCT 1022380 28 100.0 32 ............................ TGACAGACACCGTAGAAATCACATTTCTCGTT 1022320 28 100.0 32 ............................ TGTTGGCGGTATGCCCACCGATGCGACACCTG 1022260 28 100.0 32 ............................ GTTACTTATGAGCCGTCTCGGGGTCGGACCGA 1022200 28 100.0 32 ............................ GACCAGGACGACGCGATCATCAAGCGTTACGA 1022140 28 100.0 32 ............................ TGTATTTGCGGCGCTGGTCGCCGGACGAGATC 1022080 28 100.0 32 ............................ GGGCAAGCGCATTGTCTTGACCATTCCGACCA 1022020 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 52 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACAGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGTATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTGTTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACATTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAAGTGATCTGAATAGTGGCCCGGCTCAAGGCAGCATATCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCATCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACACTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACACCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //