Array 1 1423-1272 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXIU01000212.1 Candidatus Magnetaquicoccus inordinatus strain UR-1 NODE_212, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1422 28 100.0 33 ............................ GAACAGAATACCGTAATTCTAAATGACGGAAAT 1361 28 96.4 34 .........................G.. ACCTACATCCACTCGACTGCTGTAGCTTTTTTTC 1299 28 96.4 0 ..............T............. | ========== ====== ====== ====== ============================ ================================== ================== 3 28 97.6 34 ATGTGTTCTCTGTACGGATGGAAGCCAG # Left flank : TCAATCTCTTTGCTGTCTTAGCTCTCTTGATGGTATCCATCATCTTGGCAAATTCTGGTCGATTGAGGGCAGGAACAGAGCCACTAATCGTATCAGCATAAACAAGGTCTAACTGATAACCAGCCTGGGCAATCTCAAGCAGTTGGTTTTCTGTGGTCTGGTTGCTGGTGGAAACCCTGAGATAGGCAAAAGTCTGCATCTTGATCACTCCTTAATTATCCTGCTGGTAATGCGTTCAAAAAGGATGTTCAAAATACATAATGTCCAAAAATCTGTCAACAGGTTTATGGACACCCATTTTGATGATCATTTCTCCATGTCCATATACGGTCGTTTTTGGACAGTGTTGAAAGAATGATGGACGTTAGTGATGAACGTTAGTACAAGTAAGAGGAAGAGAGAAAGAGGAAGCCTGATTAAGGAAGGATGAATCTTGAACAGGTAGGAACACTGACTTGATAGCTCATGCTTATACTCTGCATGGATGTACTTGTGTACGG # Right flank : GCATGGGCAATTGCTCACAAGGCTCTACTGTTGACAGAGAACGACACACAGGCTTGCCCTCAGTCAGATCAAGGGCAACCATCAACAAGACTCTCCTGTTGACCTGAAGTGGCAGTGCTGACAGAGCATGAGTTGTTGACTATGCCGATTAACTGTTGCTAGATTGAAGCTTGGCAAGGTTGGTGGAAAACGTTGGTGGAAAGCAGCTTAGAAGAGAAAAAAGCGAAGCTTGTAACTGATTGATTTTGCTTAAACGGGAGCACACAAGAACAGACTGGCGGAGGAGCAGTCCGTCGAACTCCAGTTGCAACATATTGAATTTACATCTATTTTTCAATGACAATTTTTTGCTACCCACGATACTACCCATGATCACCTTCAAATATTACTTTTCATGTCAGAAATCAAACGTGACGTGAAAGGGGAGTGTAGCCTGCCGATTACCCCCGGTCAACATCTTCCCTGGCCAATGGCGAGACAAGCCTATTGACTTTGCCATG # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTGTTCTCTGTACGGATGGAAGCCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 8353-770 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXIU01000041.1 Candidatus Magnetaquicoccus inordinatus strain UR-1 NODE_41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8352 28 100.0 32 ............................ ACGCAAGTTGTTGTTGTTGTATACGTTGTTGT 8292 28 100.0 32 ............................ GTATAGCATAAAACTATGTTTGTCGGCGTTTG 8232 28 100.0 32 ............................ TGCAAGCTGGCCACGGTGTCGGCTGTGTCGGC 8172 28 100.0 32 ............................ AGTTGTGCACCGACAGCAACGGCAACATTGCC 8112 28 100.0 32 ............................ ACAACCAAGGGTAATATTGCCAGGGTAGTACT 8052 28 100.0 32 ............................ TCACGTAACCGAAGCACGAAAAAAGCTCTTTC 7992 28 100.0 32 ............................ GACAATCAGAAAACCAGAATCAGAATTGTGGT 7932 28 100.0 32 ............................ GCATGTATGCGTGCCTGCATGCGGCGCGTGAG 7872 28 100.0 32 ............................ GATCCGCTCCGAGCCACTCCGATCCGCTCCGA 7812 28 100.0 32 ............................ CCATCTGTTACGTCATGCTGCGATAGATCAAT 7752 28 100.0 32 ............................ GGATTGTACAATTGTCACGGGCCTTACGGGCT 7692 28 100.0 32 ............................ TTGGTCAATTTAACAGGTTGAGGAGTGTAAAA 7632 28 100.0 32 ............................ CTATCTGTTACGTCATGCTGCGATAGATCAAT 7572 28 100.0 32 ............................ TACAATCAGAAAGCCAGGATCAGAATTGTGGT 7512 28 100.0 32 ............................ TTGATCGTGATCCTGAGAACGCCAATGACCAG 7452 28 100.0 32 ............................ TATCAATTGAGCTATCAATATCAAATGCTGTT 7392 28 100.0 32 ............................ AATGCCGTCGCACGGTTCAGCATGTTGGATTT 7332 28 100.0 32 ............................ TGTTGTCGGCGATGAATCACCTCCCGACGATG 7272 28 100.0 32 ............................ ATGCTCATCGACTGTTTTCATCTTGCGGCCAT 7212 28 100.0 32 ............................ AACCGCAGAAGATTCTTGCGGAAATATCCAGT 7152 28 100.0 32 ............................ GCAATAGCTGCATCAGAGATCACGCCGCAACG 7092 28 100.0 32 ............................ GGCTAACGGATGAGGGAGTGAGAAATGAATGA 7032 28 100.0 32 ............................ CGCATTCTCCATGCTCATCGACTGTTTTCATC 6972 28 100.0 32 ............................ ATACGATCCGGAAATTATAGTCAACATGGTAC 6912 28 100.0 32 ............................ TCAGACGCAGCAGGTTCTGACATCGACAATCA 6852 28 100.0 32 ............................ AGAGACAATCAGCCACATGCGCAACCATGGAT 6792 28 100.0 32 ............................ GATTGTCGCTGACTCTTCCCGTCCAGAGACAA 6732 28 100.0 32 ............................ ATATGCAGCCTTGTATCGGCTTGGCGCTTTGA 6672 28 100.0 32 ............................ CATATCTTCATGAGTGGGAAAATGTAGTGGAT 6612 28 100.0 32 ............................ TTTTGTTTGTTACGTCATGCTGCGATGGATCA 6552 28 100.0 32 ............................ GTCACTATCTTGAGGGGTTTGTGCCCAAAGCT 6492 28 100.0 32 ............................ ATCGCCAGGCACTCCGAGCCATGGCCGAGCCA 6432 28 100.0 32 ............................ TGGCGATGGCCAGGCTGGCGATGGCTCGGCCA 6372 28 100.0 32 ............................ ATGATATGACCTGCCGATTCAAGAAAATATTC 6312 28 100.0 32 ............................ ATTTCCGTCACCTCCTCGTTGGCATTAATACC 6252 28 100.0 32 ............................ CATAAATCCCGATCTGGGATAATGCTAGCTAA 6192 28 100.0 27 ............................ ACGCCACGCCACTCCACGCCACTCCAC 6137 28 100.0 32 ............................ TGAACGAATGGCAACAGCGTGATCAAAGATTT 6077 28 100.0 32 ............................ GCAACTGAGGCAAGCCCACCGAGACGCAAAGA 6017 28 100.0 32 ............................ ATAGACAGCCAAATCTGGCCGCATCTCTGGAT 5957 28 100.0 32 ............................ ACCTGCAGCAGCGCTGCCATTGCCGGGGGAAC 5897 28 100.0 32 ............................ AAACTCCAAAGAGCTTGAGCGTGATCGACAGC 5837 28 100.0 32 ............................ GCAAGCTGCTGAAAAAGTAGCGTCAAACGTAT 5777 28 100.0 32 ............................ CTGACGATGCGATAATAATCGAGGTTAATTAC 5717 28 100.0 32 ............................ TCGACATTGTCATCAATTATTGCAAAACTGAC 5657 28 100.0 32 ............................ CTTCAACCGCTCGACGATGCGCCTCTTTTTCT 5597 28 100.0 32 ............................ GCATGCGAGCGCGTGCATACATGCGCGTGTCT 5537 28 100.0 32 ............................ AGTAATTGAATCAAGACCCTCGCCTTCGAGAT 5477 28 100.0 32 ............................ AGGAAGTCGAGCAGGCAGAGGCAACGCCTCTT 5417 28 100.0 32 ............................ TCTGAGGATTGCAGCTCCGGCAAGCAGTGCGC 5357 28 100.0 32 ............................ TTGCCAAGGCTTTTGCCAGGGTTTAACTCCGG 5297 28 100.0 32 ............................ GACCAGGTTTGACTCATGACCTCCAGCGTTTA 5237 28 100.0 32 ............................ TGACATTGCCTTTCAACTCCTTTGCTTGGTTG 5177 28 100.0 32 ............................ TTTGTCATCCTTTACTACCCGCACATTGTGTG 5117 28 100.0 32 ............................ ATGACCAAACGTATTTTGCAAGCATTGCCGGT 5057 28 100.0 32 ............................ ATGTATGGCGTTATAGGTGTTATGCAGCGCCA 4997 28 100.0 32 ............................ TGCAGGCGCAATTGGCCAGCCTGCAGGCGCAG 4937 28 100.0 32 ............................ TGTAGCGGGTGCAACCAGCAATAAACGCTTGC 4877 28 100.0 32 ............................ CCTTACGCATGTAAACAATTAATTATGCACGT 4817 28 100.0 32 ............................ GCATAAAGCGTGCCAATTTATAAAGGGTAACG 4757 28 100.0 32 ............................ TAGCGGGAGGACTTAATAGGCTACAAACCCTT 4697 28 100.0 32 ............................ GCAGAGATAAAACGGTTACCCTGTCCGAATCA 4637 28 100.0 32 ............................ ATTCATTACCCTTGAGACAATATACTGCTGGA 4577 28 100.0 32 ............................ GAAAACGTCGAGCCTGGTCCATTTTTTTTGCA 4517 28 100.0 32 ............................ ACAATAGCCCCGGCAGCGAGAGCGCAATTCGT 4457 28 100.0 32 ............................ AGTGCTTACTCTTCTGCATTCGTCATGTCCAT 4397 28 100.0 32 ............................ AGAATAGAGAAGCTGCCGAAAAATCTGGAGGT 4337 28 100.0 32 ............................ TGTTACCGCCCGCGAGGCATCTACTGCAGATG 4277 28 100.0 32 ............................ AGTGCGCTAGATCGGTTGTGATTATTGCAGAA 4217 28 100.0 32 ............................ GGAAGGGAAAAAATGCTCGGCGTGCAGCAATC 4157 28 100.0 32 ............................ GTTAGTCAACAGAGGCGGCTCTGCAGTATCAA 4097 28 100.0 32 ............................ AATGCCGTCGCACGGTTCAGCATGTTGGATTT 4037 28 100.0 32 ............................ TGCCTGGGATGTCGTTAAAGGTCTCGAATTCG 3977 28 100.0 32 ............................ TATTTCACTATAAGAAAACCCAAAATCAGCCA 3917 28 100.0 32 ............................ ACAGGAGATTAAACAGGGAACATACGAAGAAA 3857 28 100.0 32 ............................ GCCGAAAAATAACTCATCAGCATCAGATAATA 3797 28 100.0 32 ............................ TATTAAACCATCCCGCCAGGTGGAAAGCCTGG 3737 28 100.0 33 ............................ TGTGGTTGTGTCGAGCCGTGAGGGGATCGAACC 3676 28 100.0 32 ............................ AATAAAAATTGCCCATTCGTTCTAAATGATGG 3616 28 100.0 32 ............................ AATTCTATTGCCGAGTATTTCAAATAATCGAT 3556 28 100.0 32 ............................ TGGTTGCGTTGCAACCGGACGCAAGACAGGTT 3496 28 100.0 32 ............................ GCCGACAACTCAAGAGGGGTTATGGGTAATCC 3436 28 100.0 32 ............................ ACCAACAGCTATATACTACCACACCCATTTAC 3376 28 100.0 32 ............................ GTAGTGTGCTTGTAGCATAGATTTGTGACAGA 3316 28 100.0 32 ............................ GCAAGCAAATGCGGGCAAGCATGGGCGCTTTT 3256 28 100.0 32 ............................ TTTAGAGATAGCGACATCCCTGCCGATGCGAA 3196 28 100.0 32 ............................ GTCACCAAATCGGTGAAACCCACGAAAATATA 3136 28 100.0 32 ............................ GTGCAAATTTGGGCATATTGTGCGGAAAGCAT 3076 28 100.0 32 ............................ ATTGTGCTTGTATTTGCACGAAGAGCCAAAAA 3016 28 100.0 32 ............................ ATTTCTCGTGGCGAGGGATGGGAAGAAATTTC 2956 28 100.0 32 ............................ AATATCGATTATTTTCCCGTCTCTTTTTAATT 2896 28 100.0 32 ............................ GCATGCGAGCGCGTACATGTGTGCACGTGAGT 2836 28 100.0 32 ............................ CATTGCATACTGCGGAGGATGCAACTTTGAAA 2776 28 100.0 32 ............................ ATTTCTAAAGCAATCGCTCTCGATGTCGGCAA 2716 28 100.0 32 ............................ GTTCTGCAACATCCAGAGCTTGCACGCTCCGA 2656 28 100.0 32 ............................ ATATAACAAAAAAGCCACTCATTGTTATGAGT 2596 28 100.0 32 ............................ AGTGACAACCCAACATTTCTTAGCACTCCAGG 2536 28 100.0 32 ............................ CGTCCAGTTTTGTTTTTTCACCCACGCCAAAA 2476 28 100.0 32 ............................ GTGCGCTGCTTGCTCACGCACCAACTACCAGA 2416 28 100.0 32 ............................ ACGCGCATCAGCCTGCGCATTCACCAATTTCT 2356 28 100.0 32 ............................ TCATGGGCGGTAACAGTAAAACGCTCAGTACC 2296 28 100.0 32 ............................ TTGCTGGTTACGCTCCAAACCTATCACCACAT 2236 28 100.0 32 ............................ TACGCAAAGAGAGAGATGGACGCTTTGACAAT 2176 28 100.0 32 ............................ ACAATCTGCGCATCTGGATAGCGCTTGGTGAG 2116 28 100.0 32 ............................ TCCAAGGGAACACTGTTCAGGTTGCCAATTAT 2056 28 100.0 32 ............................ GTTACTATCGAGGATCGTGCGGAGGTGGAGTG 1996 28 100.0 32 ............................ ATATAGGCTTAGGTGTGGCTATCTCTCCTATT 1936 28 100.0 32 ............................ TACCAGGATCGTCCATATCAAACATAATGATC 1876 28 100.0 32 ............................ TGTCGTAACGCAGATGTGACAGCCGGGAAAGA 1816 28 100.0 32 ............................ AGAGCTTGCACGCTCCGAGGGTCTGACATTAA 1756 28 100.0 32 ............................ TTTGAGCTCAAAGGGCTGGTTATATGGATTGG 1696 28 100.0 32 ............................ TTATGAACGAGCCGCTTTGCGGCTTTCACGGC 1636 28 100.0 32 ............................ ACTAAGAGAAATCACGCTGTGCGCAGAGTACT 1576 28 100.0 32 ............................ ATGTTAATCCCCCTTATGAACGAGTCGCTTTG 1516 28 100.0 32 ............................ ACATCTAATAAACGGGGAAATGGTCCGGGCAA 1456 28 100.0 32 ............................ GTTTCCTGAGCAAATACAGGAAGTTTCAATCC 1396 28 100.0 32 ............................ AGCAACAAGCGCAGTGCTGCGGTTTTGTTTTC 1336 28 100.0 32 ............................ GTGAGATTTCTCTCACTTCTGGTAAAGGTTAT 1276 28 100.0 32 ............................ TGGCTTTAAGTGCAACGTGGGACACTGCTACG 1216 28 100.0 32 ............................ AGATTCATTGACGCCTGGATGCTTGCTGCAAA 1156 28 100.0 32 ............................ GAAACTTTGCCACCAACCGGGCGGTGTGTGGA 1096 28 100.0 32 ............................ CGTACCCGCCGCCAACATCGACGATTACTTGT 1036 28 100.0 32 ............................ AAAAGTAATGGTAAGGTAGCGGGTAATGGTAA 976 28 100.0 32 ............................ TTTATCTGGAGATCTTCCAAGCTCTTCAATCA 916 28 100.0 31 ............................ TTTATTTTGTTACAGTCGCATCGACAACAGC 857 28 100.0 32 ............................ ATTTCTAAAATCGCTTTGTCGCGTTACACTTT 797 28 89.3 0 ..C.C...................A... | ========== ====== ====== ====== ============================ ================================= ================== 127 28 99.9 32 GTTCACCGCCGCGTAGGCGGCCAAGAGA # Left flank : GATATTATCGGGAGGATGTAAAAGCCTGGTTGAGTGGCGCCCATGCCAATAAGGTTCGTTTTCGCCGTTCTGGTCCAGAGATGGAAGTGTGGTTTGACCGGGATGAAAAACAATTTTACAAACGTGATGAGCAGGGCAGGGAACAGCCTATTGCGCAGACAATTGGCACAGATCCCTCTCCCGCTTTGTCTTGCAGGTTTCTTGATCTTTCTGCGGACGCCCTTTTTGAGGAGGTGTTGGAGAAGGAGCCTGAGTTGGCAGAGGATGAGAAAAAACGGAAACGTTTTTTTCGCCGTTTTTTTCAACTTTCCCTCCCGAACTATGAAGACTCTACATGGCTCTACCATCCCGACTGTGGGGTGTTTCGACCCTTCCCGTAAATTCCTAATAAAATTTCACGCAATATTCATATGTTATCAGGATGATGTGCGACGAAGGTTTTTGTTGCCTTCTGCAGGAAAGTTGTATATCAATCAACCCTATGCGAAAGAAAAAATGCT # Right flank : TTTTTGAACCGCATGAGGCTGGCCTCTCTCTGCCGCGCACAAGCTCTAATTGTTTCTCTGATTGCGTTCGATGGCACGCAAAAACTCGTCGGGATCGCTGGGTACCTCACGACTGCTTTCCCGAAGCTGTTGCCGCTGATTATAGGTTGGTGTCTGTTCTCTGGTGGGGGGCGGCGGCGGAGGCGCAGCAGCACGGCTGTTGGTGCGGCTCCAGGTGGTGGGACGACCTTCGGGAGAGAGCACATCAATCTGGTTTTTGTTGACAAGAGTACAGGTGGCTACCCCAGCGATTCCGGCAATGGAATAATCAAATGAACGACCGGCTTGTAACCAGCGCCCACTCCCTTCATGGCGCCGCCCTTGCTTGTCAATCAGAGTGACAAATATTTGATTGCCCTGGCTGGTCAGTTGCACCGAACTGCCGGAACTGGATTGCCACAAGCCGGTGATCGAAGAGTCATCACCAGCAGGGGGAGTGTGGCTCTTGCCCGCCTCCAGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCGTAGGCGGCCAAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //