Array 1 22310-20764 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACTGS010000012.1 Limosilactobacillus fermentum CECT 5716 Scaffold12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 22309 36 100.0 36 .................................... GCAATTACCATTTACGACGTTGTAATACTTCTGCTT 22237 36 100.0 39 .................................... TATTGTTCCTCCTTTGCTATGGTATTTTATATGTTCACC 22162 36 100.0 38 .................................... CTAATTGTTCCTCAATTGCTATAACTTCATGCTTGAGT 22088 36 100.0 37 .................................... ATGAATGGCTTGATAATTTGGCCCTTCCCTTGCATCG 22015 36 100.0 36 .................................... CAATTTAAAGCTTGACAAGGTTATAAGCACGGGCTT 21943 36 100.0 35 .................................... CGTCTCCTAACTAATCTTTTGTTCACGTTTCGTGG 21872 36 100.0 37 .................................... TGGAATGTGGTAGAAATTGGCAATCTCCTTCATCTGA 21799 36 100.0 36 .................................... TCATGAATAGCGCTATACAAACCGGGCAACATTAGC 21727 36 100.0 33 .................................... AGCACCTGCTTACGATACCAAATCTTAGTTGGC 21658 36 100.0 36 .................................... TAGTCGTATAAATGCTAGTGCTATTGATAGCAATTA 21586 36 100.0 35 .................................... TGCATGACCGCCTACATATTTCATTTTAATTTCCT 21515 36 100.0 34 .................................... TGTTCCACCTAGCTGTTCTTAGTTTTTCTGGATC 21445 36 100.0 36 .................................... TGCCTAGATCTGTGAAGTCCTGTTCGTAAAACTCAA 21373 36 100.0 34 .................................... TTTGTCTTCAAGTACATTGCCATGTGGGTTGCCG 21303 36 100.0 37 .................................... AACGACTACCAGGATGGTAAGGAAATGATTCAAAAGT 21230 36 100.0 34 .................................... TTTCTAAGATCTTTTTGTAAGCACTAATCATTTT 21160 36 100.0 36 .................................... TAAATCATAGTCGCTTGTATTATGGCTTAATTCTTC 21088 36 100.0 35 .................................... AGGTCGTCCCTTGCCTCCTTAACACTACTACTAAT 21017 36 100.0 36 .................................... AATAAGTGGGCGTATGGTTGTAAGTTACTTAATACA 20945 36 100.0 39 .................................... ATTCTTGATTGTTTGGTTCATTTTGTTTACCCCTTTTCT 20870 36 100.0 35 .................................... GTTTCTTCGTTGATATCTTCGTCGTATCCCCAGCC 20799 36 72.2 0 .....G....A..T....TT......G....T.GTA | ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 98.7 36 GATATAAACTGATCTCCGCCAGAAGGAGACGAAAAC # Left flank : AAACAGTTTTACGAACGGAATTATGCACCAACCTTCCTTTCTGCTTTTCCCTCTAAATACATTCAGGGGAATTACAAAGCACCCATATACCTCGGAGCGGGGAGCGGTCTATGGAGCAAAGTTGACCATCAACATGTTAATATTGAAGGGATTCGACGTCAAACTCCAAGAAAAATGAAGATGAAGTTTAATGGTGCCCTGAAGCTAACCAAGAGCCGGATAGTACGCTATAAGACTCCTAAAAAAGATGGCTTATTTGAACGACACGTTCTCATTATTAATAACGAAAATCTCTACGAAATGGGAAAATGTGGGTTCAAAATCAAGGAATTGTAATTTCAATTCTGAACTAGTTAAGTTATAATATGTAGAGTTAATATTCGAAATTGACAATGTCCAGAAAAAGGGCTAGAGAGGCTTGAATGAGCACCTACCTGGTCGAATTATGGGCATCAAAATGTCAAGTTATCCTTGATTTAGCAAGAAAGTTAGCAGGATCG # Right flank : AAAAGCGAGAGCGTGTATCGAAATCCTTAGATTTCAATACACGCTCTCTTTAGATTTAGGGGCCAAGAAAGCTCGTTGCAGTAGACTAGATATATAATTTATAATTGACGTATAGGTTATATTCGAGAGAAAGAAATTAACACCAAATGAAATAGTAGGATGTTGATTTATCGGCAGGTCCTTACTTCGGGAGGGGTAAAGGGTGAAGAATATAGTTTATGTGGAGAATGAATGTTTTGTTGGTGTCACTAAAGAAGGGTTAAAATTTTCAAATATCAAGACAAAGGAAAAGAAGTATCTGACCTTTGATGATATCGGTACGTTAGTGTTTGATAATAGAAAGTGTTATCTATCGGAGCGAGTGATTGAATATTGCATTCTCAATCACATTGGAATTTTATTCTGTGACCGAAGCCACTCTCCTTTAGAAATGATTGAGACCACCTACAATCAGGAACACCGCTATGAACGCTTGAAAAAGCAACTAACCTTAACTAGTA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACTGATCTCCGCCAGAAGGAGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //