Array 1 881837-886859 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019698.1 Desulfotomaculum ferrireducens strain GSS09 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 881837 30 100.0 38 .............................. TGGGCGACAAGGATAAAGTGCTTGCGGAGGTCAAAGAC 881905 30 100.0 39 .............................. CTGTATTCCAGGGCATCCTGTTCAGCCTTATCTTTATCA 881974 30 100.0 34 .............................. GCCAATCCGCGGCTGGCCTTTGGAGCACTATCAC 882038 30 100.0 40 .............................. ACGGTTTCCATCGTTACACAATTTTCAAAGACTACCTGGA 882108 30 100.0 39 .............................. ACTTTCTAAACCCTGAATAACAACAAAAGGAGAAGTGGG 882177 30 100.0 37 .............................. CTAAGTAAACCAGTAACACCAGATAAATCAACAGAAC 882244 30 100.0 35 .............................. CAAAATGCCTGCATCGCACAAAACCACTTTAGGCA 882309 30 100.0 34 .............................. CGTGGTGGCTCAACCGCATCAGCAACATTTCTTC 882373 30 100.0 35 .............................. ATACTGATAACACCTGGATCAGTGCTTCCAGTTTC 882438 30 100.0 36 .............................. CAGGGAAAGGGTTGGTTTATCACAGGAGGAAGCCGC 882504 30 100.0 34 .............................. TTGACCGCATAGCCGCCAATGGCTGGCGGGTACC 882568 30 100.0 37 .............................. AGAACACTCACTTCTGCTCTGGCTAGTGCTGTTTTGA 882635 30 100.0 37 .............................. ATGAAGTTGCAAGGATGAACTGCATACTTTAATGAAC 882702 30 100.0 37 .............................. AGGAACGTGTAGTAGATCTGCCGGCCAAGCGAATCAT 882769 30 100.0 39 .............................. CCGCAAAACCGTTGCCCCTCGCGCCCTCGTATTTGGCAG 882838 30 100.0 35 .............................. CCGGCTGAAAGCAACTGCATCCGCATTCTTTCTGC 882903 30 100.0 36 .............................. ATGTCAGCGAAGTGCCAGAATTTGCCTTTGGTGTGC 882969 30 100.0 37 .............................. TCAATGCTTTCAACTTCATAGGTTCAAGATGTTCAAG 883036 30 100.0 36 .............................. GTATCTTACAAACGACGTTCACATTTATTAGAGCAA 883102 30 100.0 38 .............................. ACAAACTGAACAAAAAGGCAGCTAAATTAAACTGCCAA 883170 30 100.0 37 .............................. CTTGAAAGCCTATCACGATGTGATGCTCCACGCCATG 883237 30 100.0 37 .............................. GCTACTGGGATAATGACCTAGAACGGGAACCAGTAAT 883304 30 100.0 39 .............................. CTAAAATATCCTCCTGCTTTATCGCTTTGGATGTAGCCA 883373 30 100.0 35 .............................. CCTTTTGCTAAAGTCAGTTTGCATTATGGCTGTGT 883438 30 100.0 35 .............................. ACCCCTTATCCTTCGCACTTGGTCGTTAACCCAGT 883503 30 100.0 36 .............................. CACTCCAAAAAGTGTAGTCGTTGTGGGGAAATCAAA 883569 30 100.0 36 .............................. CTGAGGCTAGCTTTGAAAACTATAAGCCTATCAACC 883635 30 100.0 35 .............................. ACTAAATCGCCCATAAGCTCTACCTGATGTACTCC 883700 30 100.0 38 .............................. CCAACGGGGGGATAACCGTTCAGCCATTAATTAAAAAA 883768 30 100.0 35 .............................. TTACGCAGCTGGAAATAGCAAGATAAAAACTGTGG 883833 30 100.0 35 .............................. AAGAGTGCAATTAGCTTGTTAACTTCCTCTTTATC 883898 30 100.0 37 .............................. GAGTTGTATCGGAACTGCGGCCCACTTGGGTGCTTGG 883965 30 100.0 35 .............................. TGTGTTTTCCAGTTAAGGAGTTAAGAGCTGCTATA 884030 30 100.0 39 .............................. CTTTTAACAGAGCCAAGGTTCCAACTTGGACTAATTCAT 884099 30 100.0 35 .............................. ATTCTTGCTGCCGTTGCCTTTAAAGATGACTATAG 884164 30 100.0 36 .............................. TTGCTGCATTGCAATCATCGGTATACTGATAAGCTT 884230 30 100.0 36 .............................. TCTTAACAAAACGTCCCTTGAGAATGCACAAGTTTT 884296 30 100.0 36 .............................. ACACTGCTTTGATGGGCAATTTCATCAGTCTGGATG 884362 30 100.0 37 .............................. ACGAACTTAGAAAACTTTCAGATGCGGAGATTATTTC 884429 30 100.0 40 .............................. AACCCTAGTGTTGATTTGGCATCTTTAAAGGCTGGCGATG 884499 30 100.0 39 .............................. CACCACATGCGATAGAGAGATTTAAGGAACGTGTAGCAG 884568 30 100.0 35 .............................. TTAAATGAACCACCAACTGGAGGCCACACAGAACG 884633 30 100.0 37 .............................. GCTGTTGAATGATGCCACTAATATTTTGTTCCTTTGT 884700 30 100.0 36 .............................. AAGAAAAGGCCGTTTATAGCGGTGAGAATAACGGCG 884766 30 100.0 36 .............................. TCATGAACATCCGCTGGGCATACTGGTAAAATATTA 884832 30 100.0 38 .............................. TTCTTTGCAGTTGCCTTTTTATAATCAATAATTAAATG 884900 30 100.0 36 .............................. ATTGCTTCATCTGCTGTTGATACTGTATAGATTTCG 884966 30 100.0 36 .............................. ATTGCTTCATCTGCTGTTGATACTGTATAGATTTCG 885032 30 100.0 36 .............................. CATATCGGAATCCATAACATGACCGGATTTGTCGAA 885098 30 100.0 35 .............................. AAGGTTTCTGAGGCTCTCCTTTTAGTTTCTGAGGC 885163 30 100.0 37 .............................. GAAAAACAAGTTGTAATATTTACTTGCTACCAAGAAG 885230 30 100.0 35 .............................. CTCATATACACAACTATAATATATCAATACTATTT 885295 30 100.0 36 .............................. ACCACAATGCCGTGGTCATGTAACCTCACCAGCTTT 885361 30 100.0 36 .............................. CCGTCAAGTTTATTGACGCCCGGGGAGTTCCACCGA 885427 30 100.0 37 .............................. CCGCCAACTAGGCGCATCCTCCTGTCTCAGGTGGCTA 885494 30 100.0 37 .............................. CCAATAGCGCAGCTTTGGGCGCGAAAGTGGAGCTAAC 885561 30 100.0 35 .............................. CGCTCTCCGGAGTTTCAGAGCAAAGCGGCCCTGGC 885626 30 100.0 37 .............................. GACAATTTGTAACCACTTGTGACAGATGTGGCGCAGG 885693 30 100.0 36 .............................. AATTAATCTGAAAATTGTCCTAACAAACTAACCTAA 885759 30 100.0 35 .............................. CAGGCTTATCCTCTCCACGCTCTGCGGCCTTCTCG 885824 30 100.0 38 .............................. AAGACTGGGTTTTTAGTCTTATTGTAGATTTGCACCCC 885892 30 100.0 36 .............................. GAGGTATCCTGCAAAAATGAAACCGGTAATGTTTCC 885958 30 100.0 36 .............................. ACCAGGATCTGGCCAAGCGGTGCCAAATTGCCAACG 886024 30 100.0 36 .............................. ATGTCCGTTTGGAGTTATGGCCTTTTATGTGGCTGG 886090 30 100.0 39 .............................. TTGTAAAAAGTTTTTTGTTGTGAGTCACAATAAACATGA 886159 30 100.0 35 .............................. ATAGGTTCAATATTTTTTATGATGAAGTTACCAAC 886224 30 100.0 38 .............................. ATAACAAGGCATGAAAATCCCTTAAAGAAAAAGCAATC 886292 30 100.0 36 .............................. CGGTGAGCGGCAGCATCAATGCCGGAGATGATGTGA 886358 30 100.0 36 .............................. TTTGTTTAGGAAGTTTTATATGTCGCTCTGGTCTCG 886424 30 100.0 38 .............................. CTATCATTTCCTCTGCTTTCTTGTCTCCATGACGTTCA 886492 30 100.0 38 .............................. CGGGATAAGCCCCGCTGGCCTCCGTGAGCACAACATAA 886560 30 100.0 40 .............................. GGGCAACCGGCAGGGTGATATCCTTTTCCCGGGTGCCCCC 886630 30 100.0 35 .............................. TTTTTCCTTCCCCCTCGTAATCCTTTGGAGTATGG 886695 30 93.3 40 .................A...A........ GAAGATGCCACACTGGATATCAGGTGTCACGGTTTGACTC 886765 29 80.0 35 ................-..T.A.AC....A AGCCGCTTAACTAATGCCTATATCAAATCAATAGC T [886784] 886830 30 80.0 0 ..A.T...C........AG...T....... | ========== ====== ====== ====== ============================== ======================================== ================== 76 30 99.4 37 GTTACTAGACTACCTATGAGGGATTGAAAC # Left flank : TTTATAGCCCGCTGGTAATCACATTTGCGGACTAATCTCCGCTCTTACTTTTAGGTAAGGGGAGGTGAGATTAACTGTTTGTAATTCTTGTTTATGACGTAAATCAAAAAAGGGTGGCAAAGGTTCTTAAAAAGTGCCGACAGTACCTTCATTGGGTACAAAACTCAGTTCTTGAGGGTGAAATTTCAGAGGCCAACTATAAAAAACTGAAAATGGATATTGAAAAAATTATTCGGCAAGATGAAGACTCTGTAATCTTTTATACCCTAAGAACAACCAAGTATTCATCCAGGGAAATAGTGGGATTGCAAAAAAGTAGCAATGAAAATATACTTTAAACAGAAATCTGTCGTCGATCCCCGGTAAGGTAAAAACTGCCGGGGATCGACGACAAAATACTAAGAGGAAATCCTTGTACTATAGCGGTTTATTGAGAGTTGGTCCCCGGAAATTGGGGGATATTCAAAAAGTAAACTCCCGTATTTAGGCCATTTTGACGG # Right flank : CCTAGTAAAGTGCAGTCCATATGTTCTAGTCATATTTAGCAGGGGGTTGGTACCTTGTTTTTGATTGGCATTACTGGTGTGTGCGTGTATTGAAAACCAGGATTGTCCACTTTCAATCCAACTTTAATCTATTTGAATCTATTTGCCCCATTGCGGTGTATTAGTTAAGAAGCGGAATTTATTAAGTTTCTAAAAACAATATGGAAGGCCGCCTATTGGCAGCCTTCCATACATAGCTCTTTAACTAATTTATTTAAAGCTCTTTTCTCAATGCGTGATACATAGGAACGGGAGATGCCTAGTGCGCGGGCAATTTCCCGCTGGGTCTTGCGACTGGAATTGCCCAGACCAAAACGCATTTCCAGCACTTTTTTTTCTCGGTTGCTTAATTTACGAACCTTTTCCAATAGACGATTCTTTTCAAAGGTAATTTCCACAGTATCTGCTACTACCTCTGGGTCGGTACCCAGAATATCAATAAGACTTATTTCATTACCTTC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTAGACTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 916882-918312 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019698.1 Desulfotomaculum ferrireducens strain GSS09 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 916882 30 100.0 37 .............................. TACCTATAACTACAGTGAGCATGAGCCCCCGGCAATC 916949 30 100.0 36 .............................. CAGCATTTCCTCTTCCGGAGGTGGAATAAATGGCGA 917015 30 100.0 38 .............................. ATCCTCCACCACTAATGGCCGCATCCCTGGCAAAGCAG 917083 30 100.0 38 .............................. CTGTTTGGTATGGTCTTAGAATTGTCATGCGTTGGCTG 917151 30 100.0 38 .............................. CCACTCGTTTTCCATTTAGTTTGCCTTGGGATTTCCTT 917219 30 100.0 36 .............................. GCGTATTGCGAAGCTCCGTAAATGTCCGTGGACGTT 917285 30 100.0 36 .............................. TAGGCAAATTCATGTTCAAGGGTCTTAACATCAGCT 917351 30 100.0 37 .............................. TTGATTGAATACCGCAGTAATTGGAACCTGAAAATCA 917418 30 100.0 36 .............................. TCAGCTACCAGCCTGGCAGAAGCAAGCCTAAGAGTA 917484 30 100.0 37 .............................. CCAAAGGACTAAGGAACAAATCAAAAAGTACCGCCTT 917551 30 100.0 36 .............................. CCACATATGCTGGCGGCGGTAATATTGGTAGCAAAC 917617 30 100.0 37 .............................. TAACTTTCAGTCGCAAAGTCAGATGGGCGAAGTAAGT 917684 30 100.0 36 .............................. TCTTATGGCCGACTGGGAGTTAAAAATCGAACTTCC 917750 30 100.0 35 .............................. ACTTTGCCAACACCCTGGCTCTGCGGTTTTCAAGC 917815 30 100.0 37 .............................. GCCGTAGAAATCAATGGTGGCAACTTTCATACATCTC 917882 30 100.0 37 .............................. TTGGGGTCTCCGTGATTATGGAGTGCCCGGTCAGTTG 917949 30 100.0 35 .............................. ACTCAATCCCCATATACTTCCGGAAATATCTCAGG 918014 30 100.0 37 .............................. ATGATAATCACGCAATTCTGCCTCTATGTAGGCTCTG 918081 30 100.0 38 .............................. ATGCTGGGCACTCAATCATGTGTGTGCTGGAAATGCAC 918149 30 100.0 36 .............................. CAGACCTTGAAGTAAGGGAAATTGAGGAAGCTGCAC 918215 30 100.0 38 .............................. AATTGTATCTGCGCATTGGCACTAATAAGGCCTACGAA 918283 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 22 30 100.0 37 GTTACTAGACTACCTATGAGGGATTGAAAC # Left flank : TAAGATTTTATCAAGCCGCCCGCTGGGTGGAGGAGTTAGTAACCGCCCGCGAAGAACACCGTTTACTAAAGCTGGAAAAGGAGTGGATGCGTGACGAACTGGTAATATTGGATGAACTTGGCTATATTCCATTTAGTAAAACCGGTGCTGAACTATTATTTCAGTTTTGCTCAACCAGGCATGAGCTTGGCAGCATCATTGTTACAACCAACCTGGACTTTGAAAAGTGGCCCGAGGTTTTTGGAGATGTGCGCATGACCGAGGCCTTGATTGATCGTTTAACCCACAGGGCTGATATCCATCTAATGAACGGCGAAAGCTATCGTTTTCGTGAAACCCTGCAGCAAAGATCCATAGCAAACACATCTCAACAACTTAATAATGAATAATGATAAGTGCTATTGTAGGCAGAATTATCTGTCACTTTACCATTTAATATCGGGGCCGGTCAACTTTTACTTTATCACAAGTGGTCAACTTTTGTGTTGACAAAACCATAT # Right flank : CTTGCTGGACGTGTTAAGATACTGCCTCGTGCGTTTTGTTGTAGATTCTCAAATTAAAATGGCTGGAAATTTTCCAATTTAGCCAGATTAAATAATCTGAGAACAAGAAACTATTCTCAAATTAATTTGGAAAAGTAATGGGGTCGTTCATCGGAGCGAAGCGTAGATCCTTGACATGGAGAATGCCCGTGTTAGCCTCTATGGCAAGGGGCACCAGGCGTAGCAGGGTTGCCTCTTATGCCCCTTGAAACACGGGTGCGAGGCTCCATGTCAAGGACGACCTGATACCACACCATCATAATTTGAGAATTTTAAGCATTATATGTGCCATCTCAGATTATTTAATCTGAAAATTTTTTCGTAATTAATTTGAGAATTGACATTTTGTTACTAGACTACCTATGAGGGATTGAAACTTGGATGTAAGGCATGTGATATTCCTCCTTGGTTTGTTACTAGACTACCTATGAGGGATTGAAACATCATATCTCTTGAAACTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTAGACTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 3 918698-919324 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019698.1 Desulfotomaculum ferrireducens strain GSS09 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 918698 30 100.0 35 .............................. TTGGATGTAAGGCATGTGATATTCCTCCTTGGTTT 918763 30 100.0 35 .............................. ATCATATCTCTTGAAACTGTTCGCCAATTTAGGGT 918828 30 100.0 35 .............................. ATCATATCTCTTGAAACTGTTCGCCAATTTAGGGT 918893 30 100.0 37 .............................. TTGGTGATGCCATTGAGCAATACAAAAAACTGGCCAA 918960 30 100.0 38 .............................. CCTCATCTGGGATGAGTTGGACGCTAAGAACATCACCT 919028 30 100.0 38 .............................. CCGTCAAGTTTATTGACGCCCGGGGAGTTCCACCGAAC 919096 30 100.0 38 .............................. ATGATACTGGGAACGGATACACAAGCAGAGGACAAGGG 919164 30 100.0 35 .............................. CTGGCGGTGCTTAAAGAAGCATATCCCAAAGCTAA 919229 30 100.0 36 .............................. AAGTTGAAGAACTTGGGGTACGACATGAAGGTCCGT 919295 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 100.0 36 GTTACTAGACTACCTATGAGGGATTGAAAC # Left flank : AATTGAGGAAGCTGCACGTTACTAGACTACCTATGAGGGATTGAAACAATTGTATCTGCGCATTGGCACTAATAAGGCCTACGAAGTTACTAGACTACCTATGAGGGATTGAAACTTGCTGGACGTGTTAAGATACTGCCTCGTGCGTTTTGTTGTAGATTCTCAAATTAAAATGGCTGGAAATTTTCCAATTTAGCCAGATTAAATAATCTGAGAACAAGAAACTATTCTCAAATTAATTTGGAAAAGTAATGGGGTCGTTCATCGGAGCGAAGCGTAGATCCTTGACATGGAGAATGCCCGTGTTAGCCTCTATGGCAAGGGGCACCAGGCGTAGCAGGGTTGCCTCTTATGCCCCTTGAAACACGGGTGCGAGGCTCCATGTCAAGGACGACCTGATACCACACCATCATAATTTGAGAATTTTAAGCATTATATGTGCCATCTCAGATTATTTAATCTGAAAATTTTTTCGTAATTAATTTGAGAATTGACATTTT # Right flank : CTAAAATCAAATAACAGCATAACAGTATAATGTCAATTCTCAAATTAATTGGGTTGCCATTCTCACATAAAAGTAGAACACTAATGGGCTGAAACTAGTATTTTTTTGCAAATTAAATTAAATTTCTTCAAATCTTTCTCACTTTAAATTAGTTAGTAATGTTAAAAATAACCGGGGCATTACACACCCCGGCATTTCTTAAATATTTAGCTCATTTTGTGCATGGTAAACAATTTCTTCATCAATTCTTCTTTGGTTCTGATTGCAGGCATAAATCAAAGAGTTGGTCATTAGACTGTTTACCAACCTGGGCATACCATTGGAATTAGCATAAATGGCTTCTAAAGCTGCATCAGTAATGATTTCTTCCACTAATCCTGCCATTTGAAGCCGGCTGTTGCAGTACCCTTTAATCTCTTCCTGTTTCAATCCTTGCATAATATGTTTTACCACCAGTCTTTGCCTGAGTGGTTTGTTGATATTCATACCTAATTTGTTAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTAGACTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 4 950478-951306 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019698.1 Desulfotomaculum ferrireducens strain GSS09 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 950478 30 100.0 35 .............................. ATTGCTGGCAGTAATTCTTTAGGAACCGTCACGGC 950543 30 100.0 36 .............................. CCCCAATCCATACTGTTACCTCCCCGTTTAATAATT 950609 30 100.0 37 .............................. ACTATTTTTCTTAATAATGTTCTTAATCCCTTTTTAG 950676 30 100.0 38 .............................. TCAACCTACCATTTACAGCATGGTTACTGTATGTATTA 950744 30 100.0 36 .............................. CAGTGCTTACTCATAGCAGAGTAGGCACAATAAAGG 950810 30 100.0 37 .............................. GCAAAAACGAAAACAATGCCATCGTATCATGGAAGCC 950877 30 100.0 38 .............................. ATAAGGTAAAGTTGGGACTTTTTACAGTCCCATTTTAT 950945 30 100.0 35 .............................. TCCGGTATATCATCCAGGTTCATGGAGGTTTGCTG 951010 30 100.0 37 .............................. GGATTTATTGCAGGACTTAAAAAGGCCATAAGAATTT 951077 30 100.0 35 .............................. TTTTTCCTTCCCCCTCGTAATCCTTTGGAGTATGG 951142 30 93.3 40 .................A...A........ GAAGATGCCACACTGGATATCAGGTGTCACGGTTTGACTC 951212 29 80.0 35 ................-..T.A.AC....A AGCCGCTTAACTAATGCCTATATCAAATCAATAGC T [951231] 951277 30 80.0 0 ..A.T...C........AG...T....... | ========== ====== ====== ====== ============================== ======================================== ================== 13 30 96.4 37 GTTACTAGACTACCTATGAGGGATTGAAAC # Left flank : TCTACATCAATTGGGGAATTGGATGCCCTATTACCTTGGGGCGAAGCTATCCCCGAAAAATGCCGTATGCCATTTACAAAGGAGAATGCCTAAGATGTCCAGAGGCACCGCAACTAAATTTATGATGACTTTTGTCCAGGAATATCTGGATGGAAAGCGTAGTCGCTTAGACTTTGATTTAGATTTCAACCATTACCTGATAAAGCACTATGCAAAAATGGAACGAGAAAATCCGGATCTTGCGGAGTGCTTTAATTATTACCTGGCTGAGGAAGGATTTGACCAAGCAGTGGGCCTGTCGGACGACCGGCACAGAAGGTTAATTCAAAAACAATTTAACGAATTTAAAGCGGCCCTGCGTGATGGATTTTTTGAGGGGGAACCAGTTATCCATATCCCCCTCATCCATTCCTGGGCGCTTTTTATATATGTTAGCATACCCGTAGTGCTGGCAACAGGTGACGTAGGATTTGACGCTTACAGATCCACGAGAGGAAACC # Right flank : CCTAGTAAAGTGCAGTCCATATGTTCTAGTCATATTTAGCAGGGGGTTGGTACCTTGTTTTTGATTGGCATTACTGGTGTGTGCGTGTATTGAAAACCAGGATTGTCCACTTTCAATCCAACTTTAATCTATTTGAATCTATTTGCCCCATTGCGGTGTATTAGTTAAGAAGCGGAATTTATTAAGTTTCTAAAAACAATATGGAAGGCCGCCTATTGGCAGCCTTCCATACATAGCTCTTTAACTAATTTATTTAAAGCTCTTTTCTCAATGCGTGATACATAGGAACGGGAGATGCCTAGTGCGCGGGCAATTTCCCGCTGGGTCTTGCGACTGGAATTGCCCAGACCAAAACGCATTTCCAGCACTTTTTTTTCTCGGTTGCTTAATTTACGAACCTTTTCCAATAGACGATTCTTTTCAAAGGTAATTTCCACAGTATCTGCTACTACCTCTGGGTCGGTACCCAGAATATCAATAAGACTTATTTCATTACCTTC # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTAGACTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 5 1470161-1471586 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019698.1 Desulfotomaculum ferrireducens strain GSS09 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1470161 30 100.0 35 .............................. CAGCCAAAGAAGCATTGGAGAGAGCTGCAGATTGG 1470226 30 100.0 36 .............................. ACTTTGAACCTTTAAAGGTTGCTGGTGCTAATTTTA 1470292 30 100.0 38 .............................. TTGTAAACAGCAACGGTGAGTCCCAGCTTTGTGCTCAG 1470360 30 100.0 37 .............................. CCCAATCACCGAAGACATAATAATAATCAACTACGAC 1470427 30 100.0 35 .............................. CCGGCAGAGGGGCAACTATCGCCCGGTCCACTGCA 1470492 30 100.0 37 .............................. TAAAGCTATTGCAAAGATTTCAGATGGTGTTTTCCAA 1470559 30 100.0 35 .............................. ATAAATGGCAAGAACTATGACTGGGAGGATATCAG 1470624 30 100.0 35 .............................. TCCCAATCCGCAGCAGTATAGCCAGCTTCCTTTAA 1470689 30 100.0 39 .............................. AAACTGCATGATACCACGGTTTTTCATCCTCACCTTCGG 1470758 30 100.0 36 .............................. CTATCACCGACCCGGGCACATCTAGCCAGCAATTGA 1470824 30 100.0 37 .............................. CAATTCATACCAACTCCACACAACCGGCATTTTCTGC 1470891 30 100.0 36 .............................. CTATCACCGACCCGGGCACATCTAGCCAGCAATTGA 1470957 30 100.0 37 .............................. CAATTCATACCAACTCCACACAACCGGCATTTTCTGC 1471024 30 100.0 37 .............................. GAGGATGCTAGACGTTTTTTGGTTCGCTGCTGGCAGG 1471091 30 100.0 37 .............................. TCTATACCAGCTAGTTTTCTTCGCTTCTAGGGCCATT 1471158 30 100.0 36 .............................. ATGGTATCTCGTACATCTCGGATACCAGCTCAATAA 1471224 30 100.0 37 .............................. CATCCGGTGCAGGGGCTGGGGATGCGTGTCTTTCTGC 1471291 30 100.0 37 .............................. CGTAATGTGTGGCAGCCAATGTTTTCTAGGCCAAATC 1471358 30 100.0 37 .............................. AGGATGCCGCCGGCGAATACCGCAAATGGGCACTGGA 1471425 30 100.0 36 .............................. TTTGCTGGCGACCTAAAGAAAAAGGCAATTGACCCC 1471491 30 100.0 36 .............................. CCGTAGAGTTTAACGGAAAAATGTGGGATGTACTAG 1471557 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 100.0 37 GTTATTAGACTACCTATGAGGAATTGAAAC # Left flank : GACACCATTTGAAATGAAGCGTGGAACATTGTTTCCGCGCTTTTTGTTTTTTAGGAAGAAATATGGATAAAACACGACTTCCACATTACCCTGGGAATCTAGCTAATTATTTTGAATGATGCCACCACCTGCAGATTATAGAAAAAATGTGGCAAATAGGCAGGAAATTAGAGAGAAAGAAATAATAACTTTATCGACTAATAAAGTTTTATCGGGGAAAAAGGAATTCATGGGGCGTTGATGGGTGATTTGAGTGTGTAATTAAAACTTTAAACAGTACAACTGATTGATGGAGACACAATGATTTCTGGTGTCAGAAATGAAGACGTAAAAAGTCGTCGATCTACTATGGTGTAATAACCCCAGGGGATCGACGACAATGTTTAAAATCCCCAGATGCTTATAAAATGCGGTGTGAGGGATTCTACCCTTACCCTCCATGGTGGATATAATAACAGGTCTGTCAAACGGCAGACCGCATATTTACTGCATTATGACGG # Right flank : CACAAACTGGGGGCAGGGTTTGCTAAGCCCATAATTGTTTTGTTTTCGGATGCTTTACAGTTGTATTATTTATTTTGCAACTAGTCTGCCTGCGAACCTGGGGCATGGATATGACTTTAAAAATTTATCCGCTGCTTTCCCATTTGCCGGTTGCTGTTTTTATCATCCTGTACTTAAAGCGCCCGTGGCTGATCTCAGTAACCAGCGTGTTTACCTCCTTTTTGTGCTGCCAGCCTCCCCGTTGGATCGGCAGTGTGGCAGGCGACCTTTTTGACAGTGTTACCATAAACCATATCGGCTTTATCATGGCTGTGTTTCCGATGTACTATTTGCTGCAAAAATATGTGGTGACATCAGTTCGGCATCTGATGGAACGTTCTGTTAAATCCTGCCTGCTGTTTGGAGCCATGCCGGCATTTCCGACAGCAATCAACGTCATATCAAATTGCGTGTGTATACCAAGAATAATAAGCTGTGCCTTGATATCCGCAACAGCTACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 6 2948303-2947469 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019698.1 Desulfotomaculum ferrireducens strain GSS09 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2948302 36 100.0 35 .................................... TGGAGTATGAAACCTTTAGCAACACTCCTGGGGCA 2948231 36 100.0 35 .................................... ACAGATAGTATTAAATTCTTAAACACTAATACTAT 2948160 36 100.0 37 .................................... TATAAATGTCAAGGCAAACAGGAGGTAAATTAAATGA 2948087 36 100.0 38 .................................... CAGGAGTTTGTATAGGAGTAAGTGCTGAAGATATAACT 2948013 36 100.0 37 .................................... GCAAACAAAGATCAAATGCTATTAGCGGATACATAAC 2947940 36 100.0 37 .................................... TTCTTTACTTGTCGCTTCCAAAAACGTGCTATTACAC 2947867 36 100.0 34 .................................... CGACTGGTGCCGCAAACTGACGAACAGTATAAAA 2947797 36 100.0 36 .................................... GATATAAATCTATTGAACTAATCCCAGAGGAGCAAA 2947725 36 100.0 38 .................................... AAAGCAAAATCAAAAAACCTGTTAAGCAGGTTGAAATA 2947651 36 100.0 37 .................................... ATGAAAATACGGCGATTGATAAGATAATCTTCGCCAG 2947578 36 100.0 38 .................................... GAAGATAAGAGTAAACAGAGCAATGGGGATAAAGCCGG 2947504 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 12 36 100.0 37 CTGAAACCACCTGAGATGCCGAAAGGCGTTGAGCAG # Left flank : CGGGAACTGAAACCACCTGAGATGCCGAAAGGCGTTGAGCAGCATCAACGTATGTGGTAATAATCTTATTAAATTGACTGAAACCACCTGAGATGCCGAAATGTCAATTCTCAAATTAATTACGAAAAAATTTTCAGATTAAATAATCTGAGATGGCACATATAATGCTTAAAATTCTCAAATTATGATGGTGTGGTATCAGGTCGTCCTTGACATGGAGCCTCGCACCCGTGTTTCAAGGGGCATAAGAGGCAACCCTGCTACGCCTGGTGCCCCTTGCCATAGAGGCTAACACGGGCATTCTCCATGTCAAGGATCTACGCTTCGCTCCGATGAACGACCCCATTACTTTTCCAAATTAATTTGAGAATAGTTTCTTGTTCTCAGATTATTTAATCTGGCTAAATTGGAAAATTTCCAGCCATTTTAATTTGAGAATCTACACCGAAAGGCGTTGAGCAGCGGGATTACCACAAGAACACTGCTTATCGCCATGGAAT # Right flank : TACCACAAGTGTGTTAAGGGAAAGAAAGTGGGTGGGATGGATTGGTGTCACTTTACAAATTACCTCTATAGTTAAAATGTCTTTCGGAGGGTGACCCGAATGTCTAATATGGACAGGGTTACCCTTTTTTTGCCTTCTTGATTCTCTACTTTTTAAGTAGGGTTAAAGAAGTATGTATCGGTTAATGAACTTTCACCGGGACCAGTGGCGCCTATTGTCAATAATTTTTGTTTATGGCGTACCATTTTGTTTTTTATAACGTCTTAATTAATGAAAGGAGTTGATAAATTGCGCTATGTTAGTAAACAACAGTATGTTTTTTTGCGAGCAGAACTAGCATACAGCAGGGATCAAGGTATCCTTAGTCAGGATCAGGTTGAGAGAACCCTGGCGCTCTATGCCATCAAGCCAGGCCTTAGTTTTGTACGGGTGATGTTAGTCATAGGGGCTGTGCTGGTGGGACTGGGCATCCTTAGCTTTATCGCAGCCAACTGGGATGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAAACCACCTGAGATGCCGAAAGGCGTTGAGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.40,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 7 2949875-2948688 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019698.1 Desulfotomaculum ferrireducens strain GSS09 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2949874 36 100.0 35 .................................... ATAAGACCGATGCTGAATTGGCGGCTGCCTATAAC 2949803 36 100.0 36 .................................... TCGCCCGCAATAAAAGGTTTAAGCTAGATAATGTTT 2949731 36 100.0 37 .................................... TAGTATTCTTTCAACCTGCCTTGCAAATCCTCTACCA 2949658 36 100.0 37 .................................... TGTCGAAAGCCTCTGTCATAGAGATAAGTGCAATATT 2949585 36 100.0 36 .................................... TCGAAGCGGTTGAGGCCGGTACCAGAGGTAATGTGC 2949513 36 100.0 36 .................................... TTGCACAGACTTTTGTTTAGATGAAAATTGCGATGG 2949441 36 100.0 35 .................................... AAATATATCGGCAAAATGTCGATAGTTAAATCAAT 2949370 36 100.0 36 .................................... AAAGATTATATCTACGATAAAAAACGGGTAAACAAC 2949298 36 100.0 35 .................................... TCGTAGACTTTGCAAAAAGCTCCCACGACACCTGG 2949227 36 100.0 36 .................................... TCTTAATTGATGGAAAGTTATTTCAGGTAAATTATT 2949155 36 100.0 35 .................................... AACAGTATTTTGTATTTATTGCCAAGGCAGATCAA 2949084 36 100.0 35 .................................... TGTCTGAAATAGGTGATACTTACTTTTCATTAAAA 2949013 36 100.0 36 .................................... TTTTAGGTTCAAACTCAGGTAGCTCCACCAGGGCCC 2948941 36 100.0 35 .................................... TGTCTGAAATAGGTGATACTTACTTTTCATTAAAA 2948870 36 100.0 38 .................................... ACTCTCAATATCGCTGCAAAATCTGTAAGGACCGGGAA 2948796 36 100.0 35 .................................... CATCAACGTATGTGGTAATAATCTTATTAAATTGA 2948725 36 80.6 0 ........................T..A..CTCA.A | A,T [2948690,2948693] ========== ====== ====== ====== ==================================== ====================================== ================== 17 36 98.9 36 CTGAAACCACCTGAGATGCCGAAAGGCGTTGAGCAG # Left flank : TGGGGAAAGGGTACAGTATTCTGTTTTTAAATGTTATCTAACGGACCGTAAACTGGCCGAATTACGTTGGGAACTAACGAAGATACTATCAAATGAGGATAGTTTATTAATCGCACCTATTCAACAAGCCGATGTTAACCGGATTATATATTTAAATATGAATATAGACTGGCAATTGGAAAAGGAGCGCTTTAGGACTGTTTAGTATAGTTAGGAATATATCTTTATTAGTGTTGCACCTGTAATTTTTAAATTCAAGCATCTAGCCCATTTTTATCTAAATTGATTTTTGGTGCTTCTATTTTCTTTAAAATCAAGGGGTTATTAGTTTCTTAAATAAAAAGATACTTGAAAGTGAAGTGAGGCTAGTAAAAATATGGCTTGGTAAAATTGAATGGAAAGTCACAAGGCGGTGGAAAGAGCATTTTTGCATGTTTCAAGTAAGTGCTTGAAAACATATTCCGTCATCCCTTGTAAAATAAGTATTCAGAAACACAGCC # Right flank : TTAATTACGAAAAAATTTTCAGATTAAATAATCTGAGATGGCACATATAATGCTTAAAATTCTCAAATTATGATGGTGTGGTATCAGGTCGTCCTTGACATGGAGCCTCGCACCCGTGTTTCAAGGGGCATAAGAGGCAACCCTGCTACGCCTGGTGCCCCTTGCCATAGAGGCTAACACGGGCATTCTCCATGTCAAGGATCTACGCTTCGCTCCGATGAACGACCCCATTACTTTTCCAAATTAATTTGAGAATAGTTTCTTGTTCTCAGATTATTTAATCTGGCTAAATTGGAAAATTTCCAGCCATTTTAATTTGAGAATCTACACCGAAAGGCGTTGAGCAGCGGGATTACCACAAGAACACTGCTTATCGCCATGGAATCTGAAACCACCTGAGATGCCGAAAGGCGTTGAGCAGTGGAGTATGAAACCTTTAGCAACACTCCTGGGGCACTGAAACCACCTGAGATGCCGAAAGGCGTTGAGCAGACAGATAG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAAACCACCTGAGATGCCGAAAGGCGTTGAGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.40,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //