Array 1 204789-204455 **** Predicted by CRISPRDetect 2.4 *** >NZ_JODR01000004.1 Streptomyces albus subsp. albus strain NRRL B-1811 contig4.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 204788 29 96.6 32 ..........C.................. CTCGCCGTCGATGACCTGACATGGACGTGGGC 204727 29 89.7 32 ..........C..C...........C... ACGCGCTGTGTGCCCGTGCTCCTGGCGGTGGT 204666 29 100.0 32 ............................. TGCGCCCCTTCCGCCCGGTGTGCAACCACCGG 204605 29 100.0 32 ............................. AGCGCGGTGCGGGGATCGTCGAAGGCGACGGG 204544 29 100.0 32 ............................. GATCCGCGTCTCCGGCGACTCCGGCCACACCT 204483 29 93.1 0 ..........C..C............... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 GTGCTCCCCGTACGTGCGGGGATGGTCCC # Left flank : ACGCCGGCGTCGCCTTCCCAACGTCGTGCACCCCGGCGAGCCATACGGCCAAGGCACGGGCGTCGGCGAACCCACCGAGAAGGGCCTGGGCAACGAGGCGCTTCACCTGCTCGGGCAACCACCGGTCCCAGAGCAGCCCGGCCGTGGCAGCGCTGTCGGACATGTGCCGCCAGAGGGGTAGGTAACCGTCATCCGCATAGGACGACTTGGCCCACGCCGCGCGCGCCCCCGGGGACAGCCGCTTACCGAGCCGCCCCCGTACTTTCTCCCCCACCGCCTACCTCCGCTGTTCCCGGCCCCGTCACACGCATGACGCCGGGCTCGAACGCCACCCCAACCGGCAGTATGCGCACGCGCGGAGCAGTCGTGGGGAGAGTTGACAATATGGACCGGAACTACTCAGCCCCGCGTCCCTTTCGAACTGTTGGTGAGGTATGCACCATTCAATGAAAGTGAATCCCACGGCCACCGGCAACGGATAAACCCGCAGGTCACCGAGT # Right flank : CTCCACGGGCCGGGCCAGCAGGGCAAGTCCAGACCTGCGGAAACGCTCCGGAGGAACGTTTCCGCAGGCCAGAACGATTCTGCTGGGTGGGGCGGGTGGGACTCGAACCCACGGCCGACGGATTATGAGTCCGCTGCTCTAACCGGCTGAGCTACCGCCCCGTAACGGCGCGCCGCGCACGAATGTGCGCGCCGTCTGCCGCAGCATAACCGTTCATAGGATCTGCCGCCCGCGGCGGGGGAGATCTACGCAGGTGAGGACCCCGGACAAGGGGTGAACGGTTCCCGCTCCCGCCGACTTCCGCGAAGATCGCCGGAAAAGGGCGGAAAAGCACCCGTCGGCTCCGCCCTCCCCGGCCGCCCCCTCGCCGCGCGGACAGCGCCGGCCGCATCACCGCGCACCGGCCCCGGCATACCACCGCGCACCGCCCCGGGCGTACGGCACCGCCCCAGGCATACGAAAAGGGCCCCGAAGGGGCCCTTTCCTTCTTGCTCCCGCGA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGTACGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5421-5571 **** Predicted by CRISPRDetect 2.4 *** >NZ_JODR01000056.1 Streptomyces albus subsp. albus strain NRRL B-1811 contig56.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5421 29 100.0 32 ............................. CAGCGCATCAACCGGGTGAGGCCCTGCTACAT 5482 29 100.0 32 ............................. CACCCGCCCCTCCCCGCCCCGGTCACCGGTGA 5543 29 93.1 0 .........................TG.. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGGTCCCCGCACGCGCGGGGTTGGCCCC # Left flank : GGTACCGCTCCGCGCAGTGCCGGACATGATCAGCCGAGGCGGAGTGCGCTCGGCCAACGCCGTGGCCGCACTGCTGATGCTGCACCGTCTCCGGCTGAGCTGACCGGCCGGAGAAGTCGAAGATGCAGGACAGTCTTGCCGGGCACGCGGTGGTGGCATGGCTGCACCGGTCGTCGTCCATCCGCCCGACGTGCGGAGCGTCGGCCGTGCCCTGAGTGCCGGCCGCCCCCTCCTGGGCCGGCAGGCTTCGGCGGGCCGAGGGGGCGGGACGCGGGGCGCCTGGAGCGGGGTTTCCACAGGCAGGCCGGACAGTCATACCGGAAGCTCACCCCTGTGAATAACAGAAGCTCGCAGGGCCAGCCCCTGACGAGCCCGAAGCGGCCACGTGGCACCCTTCGGCGGGATTTCGACCGTACGAACGAGAAACACCCGGAACGTCCGAGTCGTGGGAAGTAGTTAGAATCGGCACTCGGCTGGCGAAACGCTGCTGGTCGGCGCCT # Right flank : CGGGTGCGTGATGGTGGACCGGAAGCAGCAGGCCGCGCCCTGCTCCGGCTTGGCGATCGGGCGGACGGCCATGCAGACCTTCACGGGTCAGCGGTGTGGTTGACCCGCCCCCGGACCTTCGCTGTCACACCGCGCGGCCGGGGCGGGAGCTGTCAGGCCGCAGCCTCATGTGTGGTGGGCCTGGGCCCGTTAGGTGTTGGCCCAGCAGTCGCCGCGGAGTGCGGCGTGGGCCAGGAGGACGGCGGCACGCATCTGCACCACCGGGTCCGCGGTCTCGTCCGCCTCGACGGCGAACGGGCCCGCGGCTTCGTCGTGGTCGCGGGCGGCGCGGCGCAGCCGGGTGGCGAGTGCGAAGGCCGGCCCGGACACCCGGGGAAGAACACGGTTCCGTGCGTCCTGGGCGAGGCAGGCGAGGGCGTCGGCGCGGTCCTGCGCGCTGCTGGCCCGCCAGCTGCTCGTCAGGAACGGGGAACTGGCGGCGTCGTGGCGTCCGACGACGT # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGTTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 36356-36084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JODR01000040.1 Streptomyces albus subsp. albus strain NRRL B-1811 contig40.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 36355 28 100.0 33 ............................ CCGGTGCCGCTGGAGCTGCTGTTGCCGCTGCCG 36294 28 100.0 33 ............................ CCGGATTCGCCGCTTCCCCAACGGCATGAGCTT 36233 28 100.0 33 ............................ CGTTGATCGTCGGACAGTCCGGACAGTTTTGGG 36172 28 100.0 33 ............................ CGCCTGACGCCTGGTCAGAACCGCAACTGTCCA 36111 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 99.3 33 GTGCTCCCCGCACGCGCGGGGTTGGTCC # Left flank : TTCGGCGCAGGCGGGGCGGATCGGCGTCCGGGGCTGCCTTGTCCAACCCGCAGGCGCCTCCGCGACGTGACGTCCGACGCGCATACCCATGGGTTGCCGCGCCAGGCGAAACGGAACGCGTCTCGTTCGCTCCTACCGGCCGAATGCGGCCAGCTCCACGAGCAGCTGCGCCATAGCCACCAGCAGCGCCCACCGGCACCAGTCCACACGGCGTCGGTCCGCGCCCAGCTACCCACCTCCATGATCCGTTCCCGGGACCGTAGAACGGGGCGCGAGGTACCCGGAGCGGGGTACCCACAGGCAGGCCGGATCGTCATACCGGAGGCTCACCCTTTGGATGAAGGGCTCGTCGGACTGGAGGCTGACCAGCCCTCGCAGTGGCCCAGCTGACACCCTTCGGCAGGGTTTCGACTCCTAATGGGAGAACGCCCGGAAGGTCCGAGTCGTGGGAAGTGGTTAAAATCAGCCCTCGACTGGCGAAACGCTGCTGGTCAGCCTCT # Right flank : CAGGTTCCGGACGTCCGCGTCGGTGATGGTGAAGTGCCGCCTGTCCCCGCATAGTGGCCCCGCCGGCACCACTCGGCGGGGCCATCCACATGGTCGGTGCGCTCCAGCACCACGTCCAAGCGCCCGCCCAGCCGCGCGAAACCTGCCTCGGTCACGCCGCGCAGGTGCTCCAGCTCGACGGCGACCGTCGCCTCTTCCGGTACCCGCATTCCTTCTGCTCGCAGAGCCGAAAGCAACTGCGTCCTGAACGGCACGTGCACGGGGGCGCTCGTCGCCGCTGACGACGGAGGTGACTGGCGCCGCTCGCTGGTGGCCGCGTGCACCGAGCACGGTTCGGGGATCGGCACCCCGGCCCTGTGGGAGGTGGCCGCGTCAGCGACCTGCGGCCCGCCGGCTTGCACTTTCCCGAAGGAACGCAGGGGAACGTGGCGGAGGGGCGCGTGCAGGGGCCGTCTTTCGGCGAGCTGTGGGACGGAGTGCGGGAGGCGGTCCTGGTGCCG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGTTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACACGCGGGGTTGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //