Array 1 17474-15105 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJO01000021.1 Bacteroides propionicifaciens DSM 19291 = JCM 14649, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 17473 47 100.0 30 ............................................... AAAAAAGGGAGTAGGGTTTGATGCCCACTC 17396 47 100.0 30 ............................................... AGCATATCAATGAACTCACTGTACACACCA 17319 47 100.0 30 ............................................... CAGCGGTTTAGGTAGAACGGAAGAGTATGA 17242 47 100.0 30 ............................................... TATCAAGCTTGCAAGACCAAGCAGGCAAAG 17165 47 100.0 30 ............................................... TCTATTTTTGTTAAAAGTGAACTTTGCGAA 17088 47 100.0 30 ............................................... TCTCTGTTAGCCAAAAAGATGCACCGAAGA TTCTATGGAGTAAT [17044] 16997 47 100.0 30 ............................................... GTTTAATCAGATTAATCAAGGCCTTCGCTC 16920 47 100.0 30 ............................................... TTTTTGTTCTAGCTATCACACTGTCATTTA 16843 47 100.0 30 ............................................... CCTTCCTAAGTTCTATTCTTAACCAATTAC 16766 47 100.0 30 ............................................... AGCCGGTAAAGGTGGGGGTCAAAACAATTA 16689 47 100.0 30 ............................................... TTAAAAGTAAGTTCGATTCTTACAAGGCGA 16612 47 100.0 29 ............................................... CAAAGGATCTGTTGAACCAGGAGATTGGT 16536 47 100.0 30 ............................................... CGTGTCTAGAGCCTCTCTCTTCGTTTTTGT 16459 47 100.0 30 ............................................... TACAGAGCTCCAGAGTCGTGGGGTCCACCA 16382 47 100.0 30 ............................................... CTTTTTTCCTTGTTGAATTTTTCACCCTTA 16305 47 100.0 29 ............................................... TTAATATTCAAATATACAATTACTATTTC 16229 47 100.0 30 ............................................... TAAATAAGCTTGCGAATTCAACCGCTGATA 16152 47 100.0 30 ............................................... GCTCCAGGTTATGGGGTTGATCTTGTTTTA 16075 47 100.0 30 ............................................... CCATACTTATAAAGACTAATTCGCCAGCCT 15998 47 100.0 30 ............................................... GGACACTACCGCAATTAAACAGGTAAAAGC 15921 47 100.0 30 ............................................... GCCACCAACACGGCAAACAATAATAATCAA 15844 47 100.0 30 ............................................... CTTTATTGAGAACGAACCAGAGCTTACGGA 15767 47 100.0 30 ............................................... CTAGTATTTCAAAGTCGTAAAACACACTAT 15690 47 100.0 30 ............................................... CTCCATGAGTTTTTCAAAGCATTTACCCGA 15613 47 100.0 29 ............................................... CCTGAATCTATAAAAGAAAATATGTATAT 15537 47 100.0 30 ............................................... AAATAACAAAGGTAGAAGACTAACTTATAT 15460 47 100.0 30 ............................................... GGTCTGGAATGATGGTAAAAACATCACCGA 15383 47 100.0 30 ............................................... TATCACTATCTTCTAGTGATTCAGAAACTA 15306 47 100.0 31 ............................................... ATCACTGGGGTTGCAATTACCCATCAGCCTA 15228 47 100.0 30 ............................................... TCTATATGGTTACCATCTTGAATAACATAA 15151 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 31 47 100.0 30 GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC # Left flank : TATACAGAACTTTCACTTTACGTCCACAATCAGAAATGACTTTAAGCTTTAGTCAATCAGATACTTTTAAGCTTAAAATTAAAGCTGTGCACAATGATAGACCCTCTTATCATGATGGAGGGTAATTTTCTGTAACTCGAACACGATCAGAATGGTCTGAAGGAGAAATATCATTTAGACTATCTACATACGGTTCAGGACTTGGCCCGTCAATCTCGCAAGAAGAGTTTAATAGCAACCAATAACTTTAAGAAAATATTAAACTTATCTATCTGTGAAATAAGATAGATAAAAACAGGATGCTAAAGGCAAACTACAAGTATCCCAAAAGATAAAAGGAGATTGGATAGTACCAATCTCCTTTATATATTCTTTAGCACCCGAATTAAAGACTTAGTGCTAAATTACCCCGTTTTTTGCCCCACCTATTTACAATGAGTTTGATATTGTGATAGTTACATGCTTAAACCTATCCTTATTGTGAATGTATGCAGTGCCTC # Right flank : TGACCCTCAGCATAGTCCTGACAGTCAGTTAGTAACAATGATTTTACGCCAAAATAAAATTGGGGTAAAATCAAAAAACCAGCCACGGTATAGGCTGGTTTTTTGTTTCTAATAAGGTCTTTTTCACCCAATTATTGATCGATAAATTGTTTAGACCACTCTTCAAAAATTAAGCTTTACTCCAATTAATAGAAAGACTATCTTATCAGTTTTCCATCAGAACTTGTAGGTCTTAAGGATTCATAAAACTCTTTTTTAGGATAATCAGGCTATTGTAGCAACATTAATTAAATTATTCAACATTAAAGACCGATATAGGAGCATTTATATGCTAGTAAACTATTGGAATTAAACTTTATATTGCTTATCTTGTAGAGTAAATATATTTAATTATTCTACTTATGATTATAGCAAAATCAACACCTAGTAAAGTTTATAAGACAGCTCAAACTTTATCGTGTATATTAAGTTTGGTTTTGCTGATAATACTCGCAGTCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //