Array 1 218107-217550 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFUS01000005.1 Parvimonas sp. oral taxon 393 str. F0440 Contig466, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 218106 30 100.0 35 .............................. TTAGAAAAATCTAACTTCTTATCTTCAACTTCTTT 218041 30 96.7 35 ...........G.................. CTTCATCTTCTTTCGTTGTATATGATGTAACAAGT 217976 30 96.7 34 ...........G.................. TTTCTTCAGCATTCATTCTAGCAAGTTTCTTCGC 217912 30 100.0 37 .............................. TGAGCATTATTCTTTAAACTTTGAAATTTCTTTTTTT 217845 30 100.0 36 .............................. AAGTTTGTATTGTGCAAGTTTATGAAGTGGAACAAT 217779 30 100.0 34 .............................. CCTTCTATGTGTAACCATAATATTTCTTTCTTAA 217715 30 100.0 35 .............................. TTTATTGTTCTTCCGAGTACAAGCTCTGTTTCGTG 217650 30 100.0 41 .............................. ATGAGTTTAGCTATAAAAAGCACGATTGGTTTTGCAGCTAA 217579 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 9 30 99.3 36 GTTTAAATAGAAACATACTGTAATGTAAAT # Left flank : TTGTTGGATTGTGGAATAAAATCAATGATTTTAAACAGGCATTTATTCAATTAAATATTTTTCTTCAATCTTGGAATATCTTTGATGGAGCGGTTATGGATATTTTATGGACTAAGAACAGCAAAAATTTAAAAATCAAAGGCATAGAGGATAGTGAATATATACCTAGTGTTTTAGATGTAATTAAAAAGAGAATTATTTTTATTCCTGTTTTATTTTTAGTGGCTTTAATTTTAGCTAAAATCATTGTACTTATATATTAAATTATTTGGCAGTATATAATGAATAGTTTGTTTTAAACTGAATCAATAAGATCATAGAAAAGATATACTTTTATGATTAGAACAAGATTAAATATTATTGATAGTTTTTTAAAAAATATAATAGTAATATAAAGCGCAAATATTATTGGATGTAAATTGAAAAATTATGAATCCATTATTTTACAAAAGGATGTAATGTAATTTCTTTCTTTAATAATTCTTTAAATACATTAGTTA # Right flank : TGCGACATTGCTTGAAGTGCTTCTGAAAGATAAACTGTTCAAAAAGAAACTAAAAGAATTTTTAAATTATTCCACTTTAAGGATTGATTAGATAAGGGGATATAGGAAAAATTTTTTTACCATAATTCAAAAAACTATAGATAATTTAAGAAAATTTTCTAACCCGGTCTTGTTTTGACGTGGAAGTGAAGAATCTATTTCAGCTAAGGGTGAAAAGAAATTGAAAGGATATCTGGCTAAAATTTCAACAGAAGTTTTTGAAAGTATGTGACACGGACAATTTTTGCACGAGTATCCGAAAGAATATGCATATAAACTGAAAATATTTTTGTAAGAATAAAATTAAACTATAGGAGAAATAATTTAGATGATTAAGACGCTTATTATGTTGGGACTGGTGTGTCTATTAGCTATATTTATGATGATGGACTTTATTATTGTGATTCCGAAGTTCGGCTCTAAACATTTTGGTGCACCTGATGATATAAAGGAAATGATGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAATAGAAACATACTGTAATGTAAAT # Alternate repeat : GTTTAAATAGAGACATACTGTAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 223947-219705 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFUS01000005.1 Parvimonas sp. oral taxon 393 str. F0440 Contig466, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 223946 30 100.0 35 .............................. TTATCTTTTCTTCATCAAGATTATTTTTTGCCTTT 223881 30 100.0 35 .............................. GCTGTTGTTTTAGGCATTGCACAAATGGCACAAAA 223816 30 100.0 35 .............................. TTTGCAACTTCTTTTGTTGGCTTTGCTAGTCTTGC 223751 30 100.0 35 .............................. ACCAAAGAACGGCTCAAGATAAACATCATGCTCCG 223686 30 100.0 37 .............................. ATTTTTCCGTCATACTTGCTTTCACTAGCCTGAAAAA 223619 30 100.0 36 .............................. TCTTTCTATTTTTTATTTTTGTTATTATAAAATATC 223553 30 100.0 35 .............................. ACTTTAGCGGCAGTCTTTATTCCATTTCCAAGAGT 223488 30 100.0 34 .............................. GGAAAATGTCAGGCTCTTTACCGTAACTTTCTTG 223424 30 100.0 34 .............................. ACTAATAATATTAATTTTGTAAAAAATTAATATT 223360 30 100.0 38 .............................. CAAGGAAACAATATAAATACAATTTTAAGAAAATTATA 223292 30 100.0 35 .............................. AAAATAGACACAAAAAAGTTAAAGGTTGTAAAAGT 223227 30 100.0 35 .............................. GGAAGAATAGTTTTTGCTAAAGGTCCAAAAAATCA 223162 30 100.0 35 .............................. ATTATTGTTCCTATCGTCGCAAAAGCCCCTTTTAA 223097 30 100.0 36 .............................. ATTTCCGCTTTTAAAATATCATTGACAGCTTTTTCA 223031 30 100.0 34 .............................. GTTTGCTTTTGTATTGCTTCTAAAATCACTTTTT 222967 30 100.0 38 .............................. ATTTATCGTGGAATTGACAATATGAGCAGAGGTAGAGA 222899 30 100.0 36 .............................. TTAAATTCACTTATAACTTGATTCATTTTTGAAATG 222833 30 100.0 36 .............................. GGGCAAAAAGAAAAATGGGAAATCATAAGAAGAGAA 222767 30 100.0 36 .............................. ATTGAAGATAGATACATTTTCATAACATTAGGCGAA 222701 30 100.0 36 .............................. CTAACAGTCAACAAAATGTCTTCACTATAAGGTATT 222635 30 100.0 36 .............................. ATTAATTCTAAAATTGTCTCTTTCAAACTGTCCACC 222569 30 100.0 35 .............................. AAAATTATGAATTTTTCAGCAGACAGGACAGAGAG 222504 30 100.0 35 .............................. ATTTCCATACCATCTATGTCGAAACGGATATAGCT 222439 30 100.0 36 .............................. CTTTTCGCAACAATATTATCATCATTTAAAGGATGC 222373 30 100.0 36 .............................. CAATAATAGTTTTCTCGTTTTTTGTTAAAGTTTCAA 222307 30 100.0 34 .............................. TTAGAAAATACTTGCTTTAGTATTTCGTTATGCG 222243 30 100.0 39 .............................. ATCAAAGGCTTTTAAAAAATATGACTTTCTCGTTTCAAA 222174 30 100.0 34 .............................. TTAAGAGTTGAATTATGCTAGAGCATAAATTTGA 222110 30 100.0 35 .............................. ATGTCTATAAATGTAAAAGATTTAACATTATCAAA 222045 30 100.0 36 .............................. CAAAAGCCAGCTATAAGCATCAAATATTGTTGTTTT 221979 30 100.0 34 .............................. AATGCACCTATTAAATCTTGTATATTATGTGCCA 221915 30 100.0 36 .............................. GATATTACAACAAAGGTATTACAATATTTTACCCAC 221849 30 100.0 35 .............................. GTTTATAACTTGATGTTGGATAATGAAAATGGAGA 221784 30 100.0 35 .............................. ATTTCCATACCATCTATGTCGAAACGGATATAGCT 221719 30 100.0 36 .............................. CTTTTCGCAACAATATTATCATCATTTAAAGGATGC 221653 30 100.0 36 .............................. CAATAATAGTTTTCTCGTTTTTTGTTAAAGTTTCAA 221587 30 100.0 36 .............................. CTACTACCTGAACCGATTACTTTAATGTCTATCATA 221521 30 100.0 38 .............................. TAAATTATACTTGCAACCTTAACAATTCCCCAAGCAGC 221453 30 100.0 34 .............................. GCTATCGTAACACACTTCTATAATGTTGCAATGG 221389 30 100.0 36 .............................. TTATTATAATTTCTCTTGCTTCTTCCACACTTCTAG 221323 30 100.0 35 .............................. TGTAGAAAATCATCAAGATATAAAACTTCTACACG 221258 30 100.0 38 .............................. TAAATTATACTTGCAACCTTAACAATTCCCCAAGCAGC 221190 30 100.0 35 .............................. TGTCAAGATTAAAAGTTTTTAAACTTTCTTTTACT 221125 30 100.0 37 .............................. ATTTCACGATTTAAAAATCTTGCAAAAAAAATTCTTT 221058 30 100.0 39 .............................. TAATGTAATAAGGGTTTTTCTTTCATAGTAATATACTCA 220989 30 100.0 39 .............................. GTTTTTGGATTTTTAGTATTAACAGCTCTTAAGCTAAAG 220920 30 100.0 35 .............................. TAGTTCTAAGTAAAAAAAGGGAGTATGTTATCTCC 220855 30 100.0 35 .............................. TTGATAGTTGCTGATTTCTGTTAAAAAATTGTTAC 220790 30 100.0 35 .............................. TGTATCGAAAAAAATACAGAGATACTTTTTAAAGC 220725 30 100.0 36 .............................. ATGGTAGTTTCAAGAAAAAGAAAAGGAAAAAGATCT 220659 30 100.0 41 .............................. ATTGAAGCCGCATATGGAGTTGTTAAAGGTGTTGTTGATAG 220588 30 100.0 38 .............................. GAGGGGATTGGAACAACTTTAGTATATGTGCTTTATTT 220520 30 100.0 36 .............................. GCTACATCTTTATCCTCTATTACATATGCTCCTGTT 220454 30 100.0 35 .............................. GTATTAAAAGTATCAATAAGTTGAGCTGATAAATT 220389 30 100.0 34 .............................. TACTTTTGATGTTATCGCATTGTCAACACCTGAA 220325 30 100.0 37 .............................. TTGGTGCTTTGGTTTCAACAAAATAATAATTTCCAAA 220258 30 100.0 35 .............................. AAAAGTAAATTCTTTTCAATATCTTTTCTGAGATA 220193 30 100.0 35 .............................. TTTCATAAAAGTATTCTTCGTTCCCGCATTTTTTA 220128 30 100.0 35 .............................. GAGTTATAAGTGGTTTCCCCGATTTGCTCTCCGTC 220063 30 100.0 34 .............................. TTTGAAATTTGGACCGTAAAAGGTGTTGAATATA 219999 30 100.0 34 .............................. TTGTACGACCTGTCGCACTTGCAACAACTGCTGA 219935 30 100.0 34 .............................. GATGGAACACCAAAAGTAGGAATTGTAGAGTTTT 219871 30 100.0 39 .............................. TTTCCTATATATATATATGCCAACATGTGTAATATAGTG 219802 30 100.0 38 .............................. TCATGTGGTACATAGTCTAGCCCGTTTGCGTGATATGA 219734 30 83.3 0 ........................T.CGTA | ========== ====== ====== ====== ============================== ========================================= ================== 65 30 99.7 36 GTTTAAATAGAAACATACTGTAATGTAAAT # Left flank : GTCTTGGATAGAGGATAGAAAATTAGAAGATCAGGTAGAAAAAAGTAAAGATAATGAAAATTATTTAGAAAAATTGAAAAAGATTAAAGATAATATTCAAAAACTAATACAACAAATACAAAATAATAAAATATAGTATTTTTAGGTGGTTATAAGGGAATTTTAGGTAGTCTATCTGAGCTTAATCAAAATAATAATGTGCAAAATGGATTTTATATTGATGAAAAAACAATGCTACCATACGGATTGATTGAATTAAATATAATTGAATAATTTGAATTTCAATATATTAAACTAAGGATAGTAAAATTATTAAAAAAGATGATTTGTCAACCTTCAGTATGTGAAATTTACTGGAGGTTCGACAGATTAAAAAAATGTTAAAATTTCAAGTAATTCTGTTTTGGTTAAAAAATTTAGTGTAAAATTTCAAAAAAATTTTGTAGGTAGACAGAATTTTCGAATTAATGGTAGTATTTTCAATATGTACAGAGCTACCT # Right flank : GGATAGTTATATTTTTGACATTGAGATGGCGATTCAAGTCTTGTTTGTGAGTAGTGAAAATGTCATTACTATATTGCTAATCCTAATAGAGTTATTTCTGTATTTTGATTAGCAATTATGCTATAATATAAAAAACTACAAAACTAATTATAATAAATGTTTCCTTTGTATTGTTTGATACAACATTATTATAAAGTTTTAGGAGGTCTGTCTTATGAACGAATTTAATAAGTACAAAATACTAAGTGCGGGAAAAACATTTGGACATAGGGCTAAAATTGCTTTATTATTACTTGATAGCAGTACAGCTTATGAAGAACTTAAAGAGGAAGCTACACATACTTCAGTTGCTGGAAGTTATGATTGTGTAGGTGGTTTTCCTGCTGAAATACTTGAAAGAATAATAAAGGAATTGATATGCCGTGATATATGGTATTTGCCTGACAATGTAAAATTTTGGGACAGGCGTTTTGGCAGTCTGTTTGAGACAAAGTTTTTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAATAGAAACATACTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //