Array 1 18-2380 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFS01000413.1 Acinetobacter baumannii strain ABBL067g contig-6000018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18 28 100.0 32 ............................ ATAAAGCATTAGAGAAATCATCGCGTGCTGTA 78 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 138 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 198 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 258 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 318 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 378 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 438 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 498 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 558 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 618 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 678 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 738 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 798 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 858 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 918 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 978 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 1038 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 1098 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 1158 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 1218 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 1278 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 1338 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 1398 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 1458 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 1518 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 1578 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 1638 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 1698 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 1758 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 1818 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 1878 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1938 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1998 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 2058 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 2118 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 2178 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 2233 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 2293 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 2354 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 40 28 98.6 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : GTTTTTACTTAGCTCTAG # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-329 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFS01000088.1 Acinetobacter baumannii strain ABBL067g contig-1000074, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 61 29 100.0 31 ............................. TCATCAATAAGTTGGCCTTGATTTAAATAGT 121 29 100.0 31 ............................. GATACAAACGAGTTCGCATCTCGACCAGAAG 181 29 100.0 31 ............................. TTATCCAGATAAAACCATATCTACAAAGTGG 241 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTATTG 301 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 6 29 96.6 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4934-9583 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFS01000248.1 Acinetobacter baumannii strain ABBL067g contig-3000058, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4934 28 100.0 32 ............................ TTTGACTTTGCTGCCTCTAACTCTTTTGTTTT 4994 28 100.0 32 ............................ AACTGGAGCAGGATGAAGATGCGAAATTAATT 5054 28 100.0 32 ............................ AACAGTAAACTACCGGATTTACAGTTCAGACA 5114 28 100.0 32 ............................ GAACTCGCTCAAGACCAATGAAGTTAATGGCA 5174 28 100.0 32 ............................ CTACTAACTGCCTTGCATCTTCAGCACCGAAC 5234 28 100.0 32 ............................ ACAATGTGGGGCTTTTTTTGTTTGTGAAATTA 5294 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 5354 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 5414 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 5474 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 5534 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 5594 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 5654 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 5714 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 5774 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 5834 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 5894 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 5954 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 6014 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 6074 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 6134 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 6194 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 6254 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 6316 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 6376 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 6436 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 6496 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 6556 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 6616 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 6676 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 6736 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 6796 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 6856 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 6916 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 6976 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 7036 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 7096 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 7156 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 7216 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 7276 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 7336 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 7396 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 7456 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 7516 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 7576 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 7636 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 7696 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 7756 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 7816 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 7876 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 7936 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 7996 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 8056 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 8116 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 8176 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 8236 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 8296 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 8356 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 8416 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 8476 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 8536 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 8596 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 8656 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 8716 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 8776 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 8836 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 8896 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 8956 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 9016 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 9076 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 9136 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 9196 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 9256 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 9316 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 9376 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 9436 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 9496 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 9556 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 78 28 94.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : | # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //