Array 1 3330098-3333185 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP078518.1 Shewanella algae strain CCU4053 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3330098 28 100.0 32 ............................ GAAGTCGAATTGCTCAGCCAGTCTGATCAATA 3330158 28 100.0 32 ............................ TCCTACAAGCCGTGGCGGCACTGTTTACTGGG 3330218 28 100.0 32 ............................ ATTAGATGCACCCCTCTACGAACTGCTGAAAC 3330278 28 100.0 32 ............................ AAGCCTTGCGGTCACCGGCTACTTCCAGAGTC 3330338 28 100.0 32 ............................ ATGTTCAGCAACTGCTGACGGTGTGACGCACG 3330398 28 100.0 32 ............................ GCTTACCTTCTCCCACAACACGACATCCGTAT 3330458 28 100.0 32 ............................ ACTAATGAGAAGATAGTTTTTAGGACAGCTGC 3330518 28 100.0 32 ............................ TTGGCGGCTTTAACCACGGCCATGTATGCAAT 3330578 28 100.0 32 ............................ ATTGAGGATTTAACCGCTGCGGTAAGCAAGGG 3330638 28 100.0 32 ............................ ATTAATCATGACCCTAACCTCACAAAAGGTAT 3330698 28 100.0 32 ............................ TGGGACGGCCGGCACCCTTTCGAGCACCACCA 3330758 28 100.0 32 ............................ CTTATGAAAGCCTTCCTTCTTCTTGGTCTACC 3330818 28 100.0 32 ............................ TTGGCGCTGGCTTGGTTGCCGCGCTCGATGTA 3330878 28 100.0 32 ............................ CTGCATTTGATATCGCTGCGGCTGTGCAATCA 3330938 28 100.0 32 ............................ TTTAGGCTGTAAACACTGTTTCAATACAGGAC 3330998 28 100.0 32 ............................ GGTCATTGCTTGCTGAATGGACTTCATACAAC 3331058 28 100.0 32 ............................ AACAGGGTCAACATATGTTCCAAGCACCAAAC 3331118 28 100.0 32 ............................ AAATGCAAATCGCCGTTGAAATCCTCTGATTT 3331178 28 100.0 32 ............................ AGTAAGGTAATACTGGACTTTTGTCTCACCGG 3331238 28 100.0 32 ............................ CGCCCCAAGTAAAAAAAAGTGGCGGCCTTTAG 3331298 28 100.0 32 ............................ TTCATACTCCGGCAATTCATCGTCATTTTGCT 3331358 28 100.0 32 ............................ GTGCCAATAGATTCCAAGGTCTTGAATCTGAG 3331418 28 100.0 32 ............................ AAACACTACTGCGAGAGTGTTTGGGATGTGGA 3331478 28 100.0 32 ............................ AGACTAAATCAAAGGCATTGCTTTACATGCTT 3331538 28 100.0 32 ............................ AACAGACTTCAATCATGTCCTTAAGATCACGA 3331598 28 100.0 32 ............................ TGACAACTCCCCTGAATCGCTCAAGCGAAAAC 3331658 28 100.0 32 ............................ AACGAAGAGTCAAACGGATGGGCCGCCAAGAT 3331718 28 100.0 32 ............................ ATCATTGAATCGAACCCATCCGCTAACTGCCG 3331778 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 3331838 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 3331898 28 100.0 32 ............................ TAAAGTATCCAATCCGACCAAGCAGGAAGCCA 3331958 28 100.0 32 ............................ GTAACGGAAGCGCCAAAAACTGAACCCGTAAC 3332018 28 100.0 32 ............................ CATCGGCGAACATCCAGCATTGCTTGTTGGGC 3332078 28 100.0 32 ............................ GCCGTCACATTGCAAAATTGGGGGCGGGGAAA 3332138 28 100.0 32 ............................ ACTGGCGCGGGCTGAACTTTCAGCACCATGTG 3332198 28 100.0 32 ............................ CAACCCCTTGTAATCCGGGTTTGGCTCAATAC 3332258 28 100.0 32 ............................ TTTTTCCCAGCGTTGCCAGGTGCGAGGCTCAC 3332318 28 100.0 32 ............................ TCAATAACTTTTCGACGATTGTCACTTTTAAT 3332378 28 100.0 32 ............................ TACGGCCATTTTCTCCACTCGGGTCGGGTCAT 3332438 28 100.0 32 ............................ TGTCCAGGGCTCCAAAGTCTGGCCCATCGTTT 3332498 28 100.0 32 ............................ GCCAGAGTCTCTGATGAGTCGATGCGAAATCC 3332558 28 100.0 32 ............................ AATTCTGAAGGGAACGTGCAGCACAGAGCTAA 3332618 28 100.0 32 ............................ TGGCGATACCAGTGGCACAGGTCGAACCGACA 3332678 28 100.0 32 ............................ AGCAGCCTGCTTCAAAATGTCAGCAGTTGTTT 3332738 28 100.0 32 ............................ ATCATAAGCTGGCGGGACTGCCTCCAAATCCT 3332798 28 100.0 32 ............................ TGACAGACACCGTAGAAATCACATTTCTCGTT 3332858 28 100.0 32 ............................ TGTTGGCGGTATGCCCACCGATGCGACACCTG 3332918 28 100.0 32 ............................ GTTACTTATGAGCCGTCTCGGGGTCGGACCGA 3332978 28 100.0 32 ............................ GACCAGGACGACGCGATCATCAAGCGTTACGA 3333038 28 100.0 32 ............................ TGTATTTGCGGCGCTGGTCGCCGGACGAGATC 3333098 28 100.0 32 ............................ GGGCAAGCGCATTGTCTTGACCATTCCGACCA 3333158 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 52 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACAGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGTATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTGTTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACATTCTTTTATTGCTTTATTCTATT # Right flank : AGTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAAGTGATCTGAATAGTGGCCCGGCTCAAGGCAGCATATCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCATCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACACTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //