Array 1 6705-8126 **** Predicted by CRISPRDetect 2.4 *** >NZ_POXH01000016.1 Neisseria elongata strain C2010010207 C2010010207_S24_ctg_2306, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6705 36 100.0 30 .................................... TTATTCGCGGCAGGTTTGGAATCAGCCTCT 6771 36 100.0 30 .................................... GCTTTTTTGCCGCAGGGTAATCCGCCGCTT 6837 36 100.0 30 .................................... TACAATCACGATGTACTTAATCTTTTCGGC 6903 36 100.0 30 .................................... TAATCCGCCGCTTCAGTCCGTCAAGGGGGT 6969 36 100.0 30 .................................... CGGGCAATAGCAGCCTCTCTATCCATTTTT 7035 36 100.0 30 .................................... CATAGCTTGGTTTGAGCAGCCGAAAGCTGG 7101 36 100.0 30 .................................... TTTCCGTCCTGTTTCCATACCGTAACTTTG 7167 36 100.0 30 .................................... CGCCTCTCGTTTTTGGCTCTTTTTAAGCCT 7233 36 100.0 30 .................................... AAAGATAAATAGAGTAGCATCAAGCCACAT 7299 36 100.0 30 .................................... TCACCTTGATACATTGAACAATAACGGTCA 7365 36 100.0 30 .................................... AGCCGTAGGACCTTTTGTGTAATCAGGAAG 7431 36 100.0 30 .................................... ACTCAACATCCTACTATGATTGATAAGTAT 7497 36 100.0 30 .................................... TATTGCATCACTGCCTTTTACAGTATTGCT 7563 36 100.0 30 .................................... CAGCGCATTGCAGATGAAAATCAACATTTT 7629 36 100.0 30 .................................... CGCCAGGCGTTTGATGTATGTGTAGCCTTG 7695 36 100.0 30 .................................... GCTGCCGGATGAAGACACCAAATCGGGGGC 7761 36 100.0 30 .................................... ACTGTCGCCATGTCAGAGCACATCCTTTGC 7827 36 100.0 30 .................................... AGAACGCCGGGTCGTTGCCGATACCCGCAC 7893 36 100.0 30 .................................... AAGTAAAGCTTCAATTTGCTCGTCGCACCA 7959 36 100.0 30 .................................... AATCCATCATCAGATATGGCAAAACTTTAT 8025 36 100.0 30 .................................... GACGGTGCTGTTGCAATCGCAAAACTTTAT 8091 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GCTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : CGAACGCAGCGGCAAAGATTTGGATTGGGCGCAACAAGTGCGCAACACCCTGGGCCGGCCGGTACGCCCCTTCATGCTGGACTATCTGCACAAACAGGGCTTTGCCAAACGCTAAAAAGAACTGCGGCCTTAAGGGCCACCACTGCAAACGGCGGATTCCACAGGTTTTCGGCTTGGAATCCGCCGTTCGCCATCCACGATAATCGGTTTCACCTCATGAAAAATCTTCTTCCTTTATATTAAGATAATCAGCCTCACTCCCCATGAGACCTTTGCAAAAAAGCCCTTCCCCCGACAACCGAAACCCAAACACAGGTTTTCGGCTGTTTTCGCCCCTAATTGCGCCTAATTTTACCCAAATACCCCCTTAATCTCCCTTGGATACCTGATTAATCAGGCATCCGGCCGCCTTTTAGGCGGCAACAGGCACACTTAGCCTGTTAGCCGCTTTCAACAGGTTCAAACACATCGCCTTCAACCGCCTTTACACGATTTGAATC # Right flank : TGCCTCAGCGGGGAATCCTTATTTTATAAGGATTCCCCGCTTTCTTTTGTCTAAAAAACGGAGATTAGAACAGCAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTGAGTTCACCTAAAAGCAGTTTCATGGCGGCAAACTGCTTTTCTGTTACTTCCAAACAGCGTATCGAGCCTTCTTGCGGCAGGTTGGCGCATAGTCTGTTGTGGTGTTTTTGTAACGCATCTCTGCCTTTAACAATCCGGCTGTATACGGAAAGTTGCAGCATTTGATAGCCGTCTTTCAATAGGAAATGTCGGAATTGGTTGGCGGCTTTGCGTTTGGCGACGGTGGTAACCGGCAGGTCGAAAAAGACGATAATCCGCATAAACTTTGCCTCACTCATATTGATATTCTTTCAAAGGCAGGATTTCGGGCAGTTTCAGCAGTTTGACGTTTTTGGCGGCGAGGCTTGGCTGGAATGAGGCCATCATTTTGTCTATGGCTGCCAGTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //