Array 1 50831-51142 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTN01000002.1 Prauserella marina strain DSM 45268 Ga0244510_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 50831 30 100.0 32 .............................. GGAGTGCTACTACCGAGCACTCGACGGCAGTG 50893 30 100.0 31 .............................. GCAGCAACACGGCGAATCCGTCGTCGGTGGT 50954 30 100.0 31 .............................. CCCGGCGACCTCTTCAGCTCCGTACGAATAG 51015 30 96.7 7 .............................T CCTCGGG Deletion [51052] 51052 30 96.7 31 .............................T CGTCCGTCGAGCCATGTGGCAACTTCAGAGC 51113 30 70.0 0 ..............T......CCCTCGT.G | ========== ====== ====== ====== ============================== ================================ ================== 6 30 93.9 27 GTGCTCCCCGCGCACGCGGGGATGGTCCGC # Left flank : CCAAGCTCGCCGAACCGGTTGCCGACATCGAGCCGCTGAAGATCAGCGAAAGCGCGCCGGCCGAGGGTGACGTCGTGCGCCTCGTCGGCTGGGGCTCTTCGGACGCCACCGCCGACCTGAGCCACCGGCCCGACCGGATGCAGACCGGCCAGTTCACCGTCACCGGGTCCGACGATCAGATCGTGAACTTCACCGGCTATCTGCCGAAGCGCGACGTCAGCGCGTGTCCTTACGACTCGGGCGCCCCGTTCTTCGCCGAGTCGGAGGACGGCACCTACGAGCTCGTCGCGACCGAAATCGGCGGCCCCGACTGCCCGCACGCGGAGGAAGAGATCGCCGCGAGGTCCGACGTGCTCCACGACTGGATCAAGGAACACGTCCGGTTGCCGTGACGTATGCCAGCGTCGCCGAGGTGGACCTGCCTCGGCGACGCGGTCCCGTGCTTGCGCGGCCGCCCAAAATTTGGCACCTTTGGCGCGCGAACACCCAGGTCAAAAAGG # Right flank : GGGCCGGTCGGCCGCGGCGATCGAACCACGGCAAACCAGATCAGCCGCTACTCCCCGGAAGACCAACCGCAACTGAAACTGAGCACCTACAACGAGAAACGGCCCTCACATAAACACTGTGAGGGCCGTCTTTGCAGGTAGTAGACGTGGCCAGGGCCGGGGTCGAACCGGCGACCTTCCGCTTTTCAGGCGGACGCTCGTACCAACTGAGCTACCTGGCCGGACACGCCGGCAAGCAGCCGAACGTTTGAAGCGACCCTGACGGGACTCGAACCCGCGACCTTCGCCGTGACAGGGCGACGCGCTAACCAACTGCGCCACAGGGCCTTGCTTGTACTGCGTACTCCCAACGGGATTCGAACCCGCGTTGCCGCCTTGAAAGGGCGGAGTCCTAGGCCGCTGGACGATGGGAGCCCAGCCGGTTCGGCGAACCGAGCGACCGCGCCCTCCAGGTCCCCCTGGGAGCGACTGTAAGTCTATGACACACCCTCAACCACCCC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.52, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 507892-508594 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTN01000001.1 Prauserella marina strain DSM 45268 Ga0244510_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 507892 29 93.1 32 ...........................GT CCGATACGACGGCGGTACACCGGTCATCGGGT 507953 29 96.6 32 ............................G AAGGCTGTGAGGTCGCATCGGCGGATGTGGGA 508014 29 96.6 32 ............................G CTGGAGGACCGGTGAGCACCGAGAGAGACACC 508075 29 100.0 32 ............................. CGGCGGTACCGGTGTGGTGCTGGTGTCCGGCA 508136 29 100.0 32 ............................. TGGAATGACTATGATGCGAGGTTCAAACGCGG 508197 29 100.0 32 ............................. GTTGATCGTCGCCTCATCGACCGTCAGCCAGC 508258 29 96.6 33 ............................G GTCAGGTCGGTGGTCTACCACCGAACCGGGGCT 508320 29 100.0 32 ............................. GTCCGGGTCAGCTCGGCCCTTCCTTGCCCCGT G [508342] 508382 29 96.6 32 ............................G GTGCTCGCGAAGCTTGTTCACCTGATCATTAG 508443 29 100.0 33 ............................. CGCTCGCGCCGAGCTGGCCGACATCCGACGAGC 508505 29 93.1 32 ...................A...C..... CACAGCAACCACACCGGCCACGGCGTATCTCG 508566 29 72.4 0 ...C.......ATA.......A.A.C..G | ========== ====== ====== ====== ============================= ================================= ================== 12 29 95.4 32 GTCTTCCCCGCGCGAGCGGGGGTGTTCCC # Left flank : GCGGAACGCCTCGACGAGCGCGTCGGCGCCGGATGCGGTGAAGGCAACCAGCGCGTGCTCCTTGCTGGGGAAGTAGTTGAAGAACGTCCTCAGCGCGATGTCGGCCTCGGCGGCGATCTGCTCGACCGTGACGTTCTCGACGCCGAATCGCACCGCGAGCCGCACGGCGGCTTCCTGCACCGCGGCGCGGGTGGCCAGCTTCTTGCGTTCGCGCCGCCCGAGCGCCTGTTCCCTCTGGCCGCCGCTACTCTCCGACGTGCGCGAAACCATGGTGTTCTCCTCGATCCGGCACCCGGCCCGTGCGGGCGCGTGGCGCCGCGACCCGACAATAGGCCCGGCGTCCGCATGTGGCAGCGGCGGCCGGGCAGCGCTGGTGCCAGTGGGTCGTGGTGGTTCGTCTTTCTTTCGGCTTCGGCTGCTGGCTGTTTCTGTCCTCGCAAGATCAATTCAGTCACGCATTATCGATTCAGGGTGGGGTAAAGTTGCTGGTCAGGAAGTGT # Right flank : GATCTCGTCGTCCGCCAACCGCGCGGCCACAAGGAGTCAGCCGATCCAGTAGCGGCGCTTGCCCGGCCTGCCCGGCCCGGCGGGCAGCGTGTTTTCCCATCGCCCGCCGTTGGCTTCGATGACGGTCGCCGAAGCCGCGTTGTCCTCATCACACGTCACGAGAATCCGGTCCACCCCCAGCGATCTGGCGACAATCACGCTCTGGCGCAGGATCTCGGTCGCGTATCCGCGCCGCCGGTAGGGCGGCAGCACCGCGTAGCCGATGTGCCCGCCCACCCGGAGCAGCGCATCGTCGAGCGTGTGCCGCACCGAAGTCCTGCCCACGATCCGGCCGCCGACCTCGGCGACGAGCAGAGTCGCGGGCACCGTCCCCTCCTTGCGCCCTCGCTCGTCCCGCTGATCGGCCAGCAGCCGCAGATAAGCGGACCACTCCAGTTCTTCCCGTAGCCCCCATCCGAACTCGAATCCCTCGTCGAGCATCGCCCTGTGCGCCGCCCTGA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCGAGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 988403-989102 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTN01000001.1 Prauserella marina strain DSM 45268 Ga0244510_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 988403 30 100.0 31 .............................. GGAGCAAGGCGAGCCGGTCGGCCCCAGGATC 988464 30 96.7 31 .............................C ACATAGGACGCGCGGTAGTGGTTCGGGACAC 988525 30 96.7 31 ............................G. ACTCCCAGTACACGAGCACCTTCGGCAGCGG 988586 30 96.7 31 ............................G. CTCTACGACCGACCGGACACCATCGACGATC 988647 30 96.7 31 .............................C ACAGGAACAGCAGTTTCTGTTGGGTTTCGTA 988708 30 100.0 31 .............................. GGTTCTTCCAGGTGTTGATTCCCTTGATGTA 988769 30 100.0 31 .............................. CGGCCATGAGCCCGCGCACGTATTCGCGGTC 988830 30 96.7 31 .............................G TTGCCGAGATCAACGCGCCGGTGCCCTCCGA 988891 29 90.0 31 .....................-......GC GCCCTCAGTCCGACGCCGCGCCACCGCTCCA 988951 30 93.3 32 ............................TG GCAGCACGGGTCCCGCCGTTACGGCAATTTGA 989013 30 96.7 31 ............................G. TGAAGTACTTCGCCTGGTCGACGACGAGCAG 989074 29 80.0 0 .........A...C...-....C.....GG | ========== ====== ====== ====== ============================== ================================ ================== 12 30 95.3 31 GTCTTCCCCGCACACGCGGGGGTGGTCCCT # Left flank : GAACGCCTCGTCCGGCTCGGCGTCGTCGACATCGAACTCGGCGTAGTCGCCGTCGGGACGCATCCCCCAATAGGTGTCAAGCTGCTCGCCGTTCATGACCTTCTCGAACCAACCCCGCTCGATCTCGGCCATGTGCCGCACGAGGCCGATCAGCGACATATCGGACGGCGGGACGGTCTTACGCCTCAGTTGTTCCGCGTTCAGCCCCGCGCACTTGACGGCAAGGGTCTGGCGCTGGAAATCCAGGAAACCCGTCAGGGAAGCGCGTTCGTCACCCTCACGGGGCGGATGAGTTCTCGGATCCTCGTTCATGGCCGAATCCTGGCCTATCCAGATGGGGAAGGCGACCGGGTTGTTCGTTCACGGGTGTAATTCGCTCGCGAGGAGCCCGGTTCCGGGCAACGTGGTGCGACCGATGCACCAGGCAGCCAAGTCGACGAGGTGTTGTCTCTTCCCAAAATTAATCGATTCAGGCTCTGTATACTCGCAGGTCAAGAAGT # Right flank : GGTTCAAGTCCCGTTACTCACCCACGTTCTGTCTTCCTCGCGCGCCCGCGCCGCCTCCATCACCTCCAGCGCTGTAAGCATCTCTCCCCAAGGCCCGGCCGACCGCAATTTCCCTACCCAATCACCCTTAGAAATAAACCAGCACGCTCCCGAAATTCGTTATCATCCGACAGCACTACTGCGACACCACAAGAAATCACCGGATACGCCTCGGACTGGTCAGAAATGACTACATCACGCTTTGGTCACCACGGAAGAACCGAGTAACACCTGTTCCTTCTGGTGAGATATACCCGCATCAGATCCCGAAAACCGAATTGCTCGACACCATCCACTGAGGGACGCATGTCGAACGGTATTGCCTGGTTGTCGCCCTGGGGGAAGACAACGCGCGACCAGAACGGAATTGTCGAACGATGGTTGCCGCTGATACAGCACCTGGAAGACAGTGCCGGCGTAGCTCGCCTCATCGTCGACGAATGGCTTCCTCATCAGACGAG # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCACACGCGGGGGTGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 998484-999372 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTN01000001.1 Prauserella marina strain DSM 45268 Ga0244510_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 998484 29 96.6 32 ............................C CACGACCATCAACACCGCTGTGTTGATCCAGC 998545 29 100.0 32 ............................. GGATCACGGTGTCGCGCGATCATCAACCCATA 998606 29 96.6 32 ............................C TCGGAGACGACCTTGAGGACGGCCATCTTCAT 998667 29 96.6 32 ............................T CGCTGCCGCGACGGAGGCTAGTCAGTGCCGGG 998728 29 100.0 33 ............................. CCGCATGCCGTGCAGCACAGCCAGAAAAGCCCC 998790 29 100.0 32 ............................. TACTTCGGGTTGGACCCTCTTGCGATCTACCT 998851 29 100.0 32 ............................. GTCACAATCCCGGCATGGAGTTTGCTACCCGG 998912 29 96.6 32 ............................C GCGTCACGCCGCGACCTCACGCACATCCAACC 998973 29 96.6 32 ............................C TCCGGAGTCGCCTTACGCGGCAACTTGATATC 999034 29 100.0 32 ............................. CCTCCTGTTCGGCGGCTACTCCGAAGGACAGG 999095 29 96.6 32 ............................A GGTCGATCCTGACGGCGTACTTCCGCCGGATG 999156 29 100.0 32 ............................. AAGCGCTCGGCCTGCGCCGGGTCCTTCTCCAG 999217 29 79.3 31 ..............T........TCCGG. CGTAGAACGCGTCGAGATCACCATGGACGGT 999277 28 89.7 37 ............T....-..........C GCCCGGAGCACCCGGGTCAACGGTGCATCCGTGTGGC C,G [999282,999304] 999344 29 72.4 0 ................T...ACCAGG..A | ========== ====== ====== ====== ============================= ===================================== ================== 15 29 94.7 32 GTCTTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : TCATCGTCGTCGCCGCGTGTCCCACCGGCCTGCGTGGGCACCTCACGCGGTGGCTGCTGGAAATTTCGCCCGGTGTCTTTGTCGGCACGATCAACGCGCGGGTCCGTGAACTCGTGTGGGTCCGCGTCGTCGACATGGTCAAGAGCGGACGCGCGATCATGGTGTATTCCGCCAACAACGAGCAAGGTCTCGCCTTTTCCGTCCACCACCATAATTGGGAACCAGTGGATTTCGAGGGCGTCAACCTCATGCTCCGGCCCAACACCACGTCCGATGTGGACCAGAGTCCGGCCCCACGTCCGACCGGCTGGAGCACCGCCGCCCGGCGCCGGAAATTCGGGCGTTGACTCGGCTGGGACCGTTGCCCGGCAGGGATGGCCCGAGCAGGAGGGGCGATGTCGTCTGGGCACGGTCGCATTGACGTCGGCCATACCCCAAGGAAGATCAACTCAGTCACACATAATCGATTCAGGGCGAGGTAAAGTCGCTGGTCAGGAAGT # Right flank : ACCACGGCCTGACTCCGCGAGTCCCGCGCTCGTGCTCGCGAGTCCCCCGTTCAGGCCCCCGAGATCCGCACTCAGGTCGGCGAGATCCGCACTCGGCCCAGCGAGATCCGCAGTCACCGCACCACAGCCACGTGGAGGCGTTCCAAGGCGACCCGGGTGTGGTCTGAACACATCGCACGCGTTGCCAGCCAGCGCGTCTTCCCTGCGGGTGGCGCAGCCCAGCACCTCACCAAGACTCGCTACAGCGCACGTCTCAGCCTGGGAAACCCTCCCAGTACACCCGGTCCACTTCGGACAATCCTGCCAGGAGCCGGCCTAGCGATACGGCGGCCGCGCGACGGCATCCTGAGCCTCGGCCTGCTTCCGATGTCGTTTGCGAACCACCAGCGCGATCACGAGCAGCCGCAAGGGAATAATCACCCCGATCTTGTAGTGACCCTGGAACATGACCCGATACCGGCACCGCCCAACACAAACGGGAGAAACGCCAGACGACTACC # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 213202-212807 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTN01000004.1 Prauserella marina strain DSM 45268 Ga0244510_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 213201 30 86.7 31 ..A.....G...................AG GCTCGGACTCGACATCCAGCACCCATGCCAC 213140 30 96.7 31 .............................A CTGAGACTCAATGTTGACGGGACCGGCCTGG 213079 30 96.7 31 ............................A. GTCACGACCGGAGCGGTGTCGCCGAGTTCGA 213018 30 96.7 30 .............................A TCAGCCAGCGGATGATCGACCCGATGGTCT C [213013] 212957 30 100.0 31 .............................. AGTGCCGCCAAACCGGGCGGGCGGACATGAT 212896 30 93.3 31 ............................GG TTCTGATGATGTCCTTGACAGCAAGGCACAG 212835 29 93.3 0 .....................-......G. | ========== ====== ====== ====== ============================== =============================== ================== 7 30 94.8 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : GACCTTGCCGCCGCCGTGGCCGCACTACAGACCGAGGTCGCGGATCTGCGCACGCATCTACAGCGGGTCGCCAAGGATGCCGCAGCCGCGCAAGTCCTCGCGCGTGGCGCCGACCGCGACGTCGCCGACCTCACCAGCGAACTGCGTGACTTCCGTACCCACAACACCAATCTGCACAACGCCACCCGCGAGGATCTGCGGGAGACCCGCCAAGAACTGCGGGAACTACGCGAATCGACCAACGCGGGGTTCATGGAGATGCGTGGCAAACTCGATGCGACCGCGGCAGGGCAGGCTCAGATCGCCGAGCTGCTGACCACACTGATCGAGCGCGGCGACCGGAACGACGCCGCCGACTGACGTAAGTGACAGCGTGACGGCGCCGCTTGTCGAATTGGCGCGGTGAACCCATCGATCGGTATGCGCTGAGCTATAGAATCCAGCTCGTACCGTGGCCAAAATTTCGAGTCTTTCGCCCGCAAACCCGCAGGTCAAAAAGG # Right flank : TCCGCCTCGGCCGCCAGGTCCTGGACGCGCCACTCCACCGATGCTCCCCAAGCGTGTGGACCGCCCATCAAACCGGGCAAGAAAGGCAAACCCGAAACCCGGACCAAAGCCCCCGAAAACGCCCCGCACAAAGTGAGCCGACAAGGGGACTCGAACCCCTGACCTGCTGTTTACAAGACAGCTGCTCTACCAACTGAGCTATGTCGGCCTGCTCCCACTGTCACGCCGTGGTCGCGCGACCACTATATCGGCAGCCCGCTTCACGACGGCACCTGGTCGCGCGACTTCACGGGCCGGTTCAAGACCGTTTCTAGCGCTAAATTGGTCATGCGGCTTCGTGATCGGAAAACGTGGCAAACGCCACTCCGGTAAGGGTGCAACAGCGAGAGCACGTCGGTCGATGCTCCCCGGGAAACCTGCGAAGGAGGTGGGAAATGAAACTCAGGCCGCGCGCGAGAACGGCGCCGAACCGCCGGCACGCGTGGCAGATCCTGGAGGCA # Questionable array : NO Score: 3.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 155534-155200 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTN01000003.1 Prauserella marina strain DSM 45268 Ga0244510_103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 155533 29 100.0 32 ............................. TGGTCCTGAAGCTGGTCCCCGAGCTGGCCCCG 155472 29 100.0 32 ............................. GCCCGACCCAACGCAGACGGTCGGACGGAACC 155411 29 96.6 32 ............................G TCGTGGCGCGAGTGTCGGACCTGGAGGCCCTG 155350 29 100.0 32 ............................. TTCATCCGGAGGGGGAAGTCATGAGCAGGCAC 155289 29 96.6 32 ............................T TACTGAGCGCACCAGCCTGGTCAACCGTGCCT 155228 29 93.1 0 ..........................TT. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 32 GTCTTCCCCGCACGCGCGGGGGTGGTCCC # Left flank : CGCGGACGTGCCGTACTCCATGTCGTCTGGGTGCGCCACGACGCAGAGCACGCGCTGGAAAGACTCCTCGGGAAGAGCAGACAGTGGCATAACGACCATCCTTCCGCCTTTCAGGTCCGAAGCTCACACCTCTGACCTGCCGATTGCCGCAGCCGACAACGACCGGCAGCGAGCCCCATCAGAGTGCGGCACGCTCACGAATAGGAGAAGCAGCGACTGGCCATGCACGCGCTCTTGCTCGAAAATACCTGCGAAACCGGAACCGATCCGGGACGAAACGTGAACACGACACCCCGCCCGGTTCGGCGGCCACGCACAAGCTGCCGAGTCGGCGACGAATTACCGAGCCTCGGCGGGCGACCGACGCGTGGAGACCGTGCGCGTTGCGAGCTACCGTTTCGACGTCCGGAAGGCGGGACCGCCAGGACCCGGCTGACAACCAGGCGGGCCCGAGCCAAACTTTTTCGATCCAGACTCGATATACTCGCAGGTCAAGAAGT # Right flank : CCGGCCGCCGCCGCACCGTCGATGCAAGTCCCCTGCGCATCTCGCGCCGACCGAGATCGGTCAACCCTCGGTGAGCTTGGGATGTCCCACGCTCGCAGCCTCAAGCCACACGGTCCGCGCTTCGGCATCGATCAGATACCAGACGCGACCCGCTCCGGTGACTTCGATCTGCCACCGGGGCAGGTCGTCCTTGGCCTGAACTGAACCTGTCGCGAGTCCGCCTTTGAGCTGGTGGTGCCGATTGCTGACGCCCTGGCCGGGACGAGTGCGCAGGATGTCCCACGCCGTACGCAGGTTGTTCCCAGCCGTGTTGGTCAGCTTTTGCCAGCCCTTGATGGCTTCGGTTTTGGCATAGCGGATCTTCCACTCGTCGCTGACCGTAGGCGGCGCGACGTCATCACCGCGTTTTGGGCTCATGCGGTCGTGGAATCAGGGGCGGCGACCTCGCCGAGGTCGTCCCCTCGCTTCTTCAAGACCGCCAGTACCTCGGGGTCGGCGTA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCACGCGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //