Array 1 59747-58458 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMAF01000033.1 Escherichia coli strain MOD1-EC6290 MOD1-EC6290_33_length_134177_cov_100, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 59746 28 100.0 32 ............................ AACGAGCAAAAACGCGCGTACCGGATTGCGGA 59686 28 100.0 32 ............................ ACCAGAATTAATAATCTTTTCATCGTCACGCC 59626 28 100.0 32 ............................ GTATTGCCTGACTATTTCACGCAACAGATCGC 59566 28 100.0 32 ............................ TCTAATATTTCAAAACCCCAACGACTGCCAAT 59506 28 100.0 32 ............................ ACAGGCACCCGGCTGATGTTCGTAGGCGACAT 59446 28 100.0 32 ............................ CACATTATGAATCACACGATGGCGATGCGTGA 59386 28 100.0 32 ............................ ATCACATTTAATTCCGTGTTTCGTTTTGAACA 59326 28 100.0 32 ............................ GAACTCCCTTTCGTGGGCGGTACGTAATGATG 59266 28 100.0 32 ............................ GGGAACAACAGGACACAATCCGCAACGGTGAC 59206 28 100.0 32 ............................ TCAGCGACGAGCTGCGCCGGTGGGCACGTAAT 59146 28 100.0 32 ............................ GGGAACAACAGGACACAATCCGCAACGGTGAC 59086 28 100.0 32 ............................ TCAGCGACGAGCTGCGCCGGTGGGCACGTAAT 59026 28 100.0 33 ............................ GGTACTAAATGCGATGATCACCCCGAGCGTGAT 58965 28 100.0 32 ............................ CACCGGGCCTGCTCAGTCGCGCCGACGTCCTG 58905 28 100.0 32 ............................ AGTTGAGTAGCGTGGGACGCGATACGCCCAGC 58845 28 100.0 32 ............................ ATCCTGATAATTCAAGTCTGTGATTACCAGTA 58785 28 100.0 32 ............................ TACTTGTGCTGAAGCACTGGCATCCAGAATGC 58725 28 100.0 32 ............................ AGTACGCTATTACGCTACCCTACCCAAAACAC 58665 28 100.0 32 ............................ ATGTTTATTCCCTGATTAATGACGCCGTGTTA 58605 28 100.0 32 ............................ ACATCGTTTACTCCGTTCGCCGCGTTAATGCG 58545 28 100.0 32 ............................ ACATTGATCAGGTTATTTCAAATACGCCCGGC 58485 28 89.3 0 ....................T..TC... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTTTTATGTGCTCCGTGACTGACACACACAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCAGACCTCATAGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTGAAACGGTCAAGAAGAATTTATATAGATTGATTTGTTTGGTTACGCAATGAACACGCTGTTCGCGGGACGGAGATTATGACCGTATGTGTTCTGGTCAATTGTTTATCAAAAGCTATGCAGAAAATATGAGATGAAGAAATACCAAATCGACCCTTTTTTTAGGGCGAAATGTAACTCATTGATTTTATTTATTTCTATTTTGAAGTCTGGAAAAAGGGTTTGAATCTGCGATTTTGTAACTTTTAACAATAAATCAATCGGATAGTCTGCTATTATTCCA # Right flank : CTCAACACTCCATCCTCTAATATTTATTCCCCATAACTCACAGACGCAAAAAAGGTCGGCTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTATTAGGCAACGTTTCAAGAACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 66013-65083 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMAF01000033.1 Escherichia coli strain MOD1-EC6290 MOD1-EC6290_33_length_134177_cov_100, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 66012 28 100.0 32 ............................ AATTGTGTCGCGTCTATTGCTCCGGAGATAAT 65952 28 100.0 32 ............................ ACATCATGAACGCGCAGCAATATGCCGCAATT 65892 28 100.0 32 ............................ CGGCAGAAAAACCGGTCGCGCTAATGGAGAAA 65832 28 100.0 32 ............................ GCCGCAACTCACAATAACAGAATCACAAATTA 65772 28 100.0 32 ............................ TGCCAGATATTTCAGATCATGAACGGTTGCGC 65712 28 100.0 32 ............................ AGGAAATTTCCGGCGACTAACGAAACAGGTTG 65652 28 100.0 32 ............................ GTCATCGGTATCGTCACGCGCAAGGGATTCAA 65592 28 100.0 32 ............................ GTTGTAATTTTCGTACCCGGCGCGATCGCAAT 65532 28 100.0 32 ............................ AATCGTAGGGCACACCCTTACGGCAGTTAAAA 65472 28 100.0 32 ............................ AATCAGCCCGATCACTGTGCTGCGCCCCGCTC 65412 28 100.0 32 ............................ TCATTGGAATACATGAGTTGCGCCCATTTTGT 65352 28 100.0 32 ............................ TGGCATGCAATCACTACAGCTATTAATTTCTA 65292 28 96.4 32 .................T.......... TGAACGCGATCCGGGCGATTCGGGAGTTTTCG 65232 28 100.0 32 ............................ TTCACCGAGTGGGTGCTCGTGCTGAATGAACT 65172 28 92.9 32 ..................C.T....... CACATATACGCGAACGTCATTTTGCAGTAGCA 65112 28 85.7 0 ....................T...C.CT | C,A [65086,65089] ========== ====== ====== ====== ============================ ================================ ================== 16 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAATTCATCGTCGAGTTGCAGGTTCAGCTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCACGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCCAACGAACTGCTGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAATTAGTGCTGCGGGAAGGTAAGGATAAAAAAGGGTGCTGCAGGAGAATGGGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : ACGATAGTGTTAGGCATTTGGTCATGCCATGACACTCTCAACTTCAAACCATTAGCTTCAGCACACAATAACAATCGTAATAATTGCGACAGAAATCAATTTTCAGCACATAAATCAATGCTGTACTAAGCCCAATACCTTCAAATATAAAATAATCACAGGATGTGTTTATGTCTTCGAATTACCTTACGCCTTCCGATCTCAAAACCATTCTCCACTCCAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTTCAGGTGAATGGTGGGCGGGTGGAGTATGTCACCAGCGAAGGTAAGGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGCATTGATGTTGGGGATGGGAACATCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCCGGGGTGATGGTGGGCTTTTGTGGTACGGATGGTACGCCGCTGTATTCAGCGAATGAAGTGGATGTCGATGTCTCCTGGCTCAGCCCACAAAGT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 101909-102913 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMAF01000018.1 Escherichia coli strain MOD1-EC6290 MOD1-EC6290_18_length_128984_cov_95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 101909 29 100.0 32 ............................. ATTTTATGTGCCGCGTTGAGGCGTGGGCGTTA 101970 29 100.0 32 ............................. GAGATTGCGACGCTCCGTCAGCGCATCACAGT 102031 29 100.0 32 ............................. TGGGAACTGGCCCGCGCCATTGGTCAGGGGAA 102092 29 100.0 32 ............................. AACAAGCTCGCCCGGCCCGTCCTCATCAAGGG 102153 29 100.0 32 ............................. CCACTGCACTGACTCTCGTGCGTACGCTGCGG 102214 29 100.0 32 ............................. GCTGGCAACTGAATGCCCGCCGTATTGCCTTT 102275 29 100.0 32 ............................. CAAAGGCCCGCCAATGCGGGCCGATTTATCCC 102336 29 100.0 32 ............................. CCCTCCAGTACTGTGATGCGATCTTTAAGTCC 102397 29 100.0 32 ............................. ACTGGTTCTGTAACCCAAATTTGGGATCATTC 102458 29 100.0 32 ............................. ACGAAACGCAGTACGGTTTTGTCAGTTAACAC 102519 29 100.0 32 ............................. AACTCTCACCGGAGCAGAAAAAAAGAAACCAG 102580 29 100.0 32 ............................. TTATCGCACCGTGTTAAACCGGCAGAAAAACA 102641 29 100.0 32 ............................. CGTGCCTTCGACTTTGCGGATCACGTCGTCTT 102702 29 100.0 32 ............................. ACGGGGACGAATCACAGCAGCGTTATCGTGAT 102763 29 100.0 32 ............................. AAACCGGACGAGGGCGCGCTAAAACGTGATTA 102824 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 102885 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.8 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACGATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 128613-128946 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMAF01000018.1 Escherichia coli strain MOD1-EC6290 MOD1-EC6290_18_length_128984_cov_95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 128613 29 100.0 32 ............................. GGTGATTTTGACGTGTAAACCGGGCGGATTCT 128674 29 100.0 32 ............................. GCTACCCCACTGGCGCTTTTTCGCACTGAAAA 128735 29 100.0 32 ............................. CCGCCAGCATATTGCGCTGCTCGATTGGGGGT 128796 29 100.0 32 ............................. TAAGAGAACCCGCCATACGGCGGGGATTTTTA 128857 29 96.6 32 .....................G....... GACCTGCCGTATCGGGGTTTTAATTTCTATGT 128918 29 96.6 0 .....................G....... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : ACGGACAAAATATATATTGATTTTCGAATTATGTGTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGGTAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 40178-39415 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMAF01000053.1 Escherichia coli strain MOD1-EC6290 MOD1-EC6290_53_length_40186_cov_96, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 40177 29 82.8 33 .....T...C....C.G.....A...... GAAAGAAACCCCGCCATACGGCGGGTATTTTCA C [40162] 40114 29 100.0 32 ............................. GACCTGCCGTATCGGGTTTTTAATTTCTATGT 40053 29 100.0 32 ............................. ACGGACAAAATATATATTGATTTGCGAATTAT 39992 29 100.0 32 ............................. GTAAAGAAACTGCCGACAAATCCCTGTTCGTT 39931 29 100.0 32 ............................. CCCGTCACCGACGCGCAGTGGCGCTACCGTGA 39870 29 100.0 32 ............................. CAATCACTGATTGAAAACGCGATTAATAGTGA 39809 29 100.0 32 ............................. ATTTGGCGGCACCAGATTTTGCGTCAGATGAC 39748 29 100.0 32 ............................. CCTACGAACAATTCCTCTGAACCGCCCGCACT 39687 29 100.0 32 ............................. GGATCTAACGCGCTGTAAAAATTCCGTGCTTT 39626 29 100.0 32 ............................. CATCTATTTATCTCGCCGCGATTGGCGATAAC 39565 29 100.0 32 ............................. CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA 39504 29 100.0 32 ............................. TTCAGGGTGTGATTCCGCATACCAAGCAGTAA 39443 29 96.6 0 .A........................... | ========== ====== ====== ====== ============================= ================================= ================== 13 29 98.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGATGGGG # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCCTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //