Array 1 190163-188790 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSZY01000004.1 Pseudomonas aeruginosa strain 886-1 IPC102_4.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 190162 29 89.7 32 ..........................GTC ATGAGTGGAGGAAGGCCTAGCGATTACACCGT 190101 29 93.1 32 ..........................G.C TGGATTCTCGCAGAGGGCTTTATCAAGGAGGT 190040 29 100.0 33 ............................. TCGAACAGATCGGCTACAGCGATATCGCGGCCA 189978 29 100.0 32 ............................. CGGTTACCGCTGGCATCGAAAGCGTCGCCTTC 189917 29 100.0 32 ............................. AGGAACAACGCCCGCCAGCCTGCGACCATTCC 189856 29 100.0 32 ............................. CCGCCACGTCTGCCTGCAAATCTTCATCAGCC 189795 29 100.0 32 ............................. GTAGGCGCGCACGCCTTCCTGCACGTCCTGGA 189734 29 100.0 32 ............................. GATCAGTGTCTGTTGACACTACCTCGACCCTT 189673 29 100.0 32 ............................. CTTCCATCAGTTGCTCGTTGGAGTACTTGCCG 189612 29 100.0 32 ............................. ATCACGTTTCCGACCGGGGGAAGCTGTCCAGT 189551 29 100.0 32 ............................. TCGGCCTGTACGACGTTGACGGCCAGTTGCTC 189490 29 100.0 32 ............................. CGGCTCATTGCGTTCGGGTGGACCGTCGAACA 189429 29 100.0 33 ............................. GCGCTGGGTAACCTACGCGACAACAGCGAGTTC 189367 29 100.0 32 ............................. AGTCTTCGTTTGCTGAGATCAAGGCGGCGATC 189306 29 96.6 32 ..............T.............. GAGTTCGAAAACGGCCATCACACATTCCTCCG 189245 29 100.0 32 ............................. GTCAAGTACGCGAACCTCACGACCGGCGAGGT 189184 29 100.0 32 ............................. GCACTCCAGGGCGAACTGGACGGTATACGGCG 189123 29 96.6 32 ............C................ GTAGTCCAGTGGCATCGACAGTTCGGCCAGGT 189062 29 100.0 32 ............................. CCAGCGGCCTTGCACTTTGCCAGAGAGTTGTT 189001 29 100.0 32 ............................. GCGGCACGCCTGGACGTGCTCCAGGACATCCG 188940 29 100.0 32 ............................. TTCTCGTTCTACAACAGCACGAACGGCGGGGC 188879 29 96.6 32 ...........A................. CAGGTGATCTGCGAGCTGCCGGCGTAGCCGAA 188818 29 96.6 0 ...........A................. | ========== ====== ====== ====== ============================= ================================= ================== 23 29 98.7 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : ACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTGGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGTCACAGGACGCAAGGGTGAGCTTCCTGGCCGTGGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATGCTGTACGGTAAGTGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGTCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 201014-199338 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSZY01000004.1 Pseudomonas aeruginosa strain 886-1 IPC102_4.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 201013 29 100.0 32 ............................. ACCTACGAGTATTCCGGCAGCGCCTGGACTGA 200952 29 100.0 32 ............................. AATCTCGCGGGACAGTGCCTCGTCATCTGCCA 200891 29 100.0 32 ............................. CCAGGTCGTCGGATGCGGGACGAACTGGCCGC 200830 29 100.0 32 ............................. CCGCTCTTGCTGCGGTAGAAGGGCATGAGAAA 200769 29 100.0 32 ............................. GAGTTGAAGGGCCTAGGGAATGGCAACGCCAG 200708 29 100.0 32 ............................. CTGATCGCCACTTACCAGAAGTCAGATGACGA 200647 29 100.0 32 ............................. TCAGAAAGCTCGCGCCAGTTCTGCTCCCAGGA 200586 29 100.0 32 ............................. GGCCTCTAGGCCGATTTATCCTGTTCACCAAG 200525 29 100.0 32 ............................. GCTGAGGAACTACCCGGCGCCCTCGGCGAACG 200464 29 96.6 32 ............................C GATATTGTCCTCGTCTCCACCGCCATAAAGGA 200403 29 100.0 32 ............................. CCGAGCAGCAATGCCGCGACGGCGAGATCGTA 200342 29 100.0 32 ............................. CTGCCGAGCAGGGCCAACAGCAGCAAGCCCAA 200281 29 100.0 32 ............................. ATCGTCCTGGAGGACAAGGCCGAGTTGAAGAA 200220 29 100.0 32 ............................. GCTGGCGAACTGATTGGCATGACTTCTGCGGC 200159 29 100.0 32 ............................. TTCGGCGACCTCATCTGGTTCAACCGCTGGGA 200098 29 100.0 32 ............................. AATCTCTTCCTTGCCAAGAAGAGAGAGCTGAA 200037 29 100.0 32 ............................. ACCTTTGGCCGGAGATGCGGAGAGTCGTGGCA 199976 29 100.0 32 ............................. TTGTTCCGATGAAGAAGCGCGAGGACCGATAT 199915 29 100.0 32 ............................. AATCGCAAGCGCATGGTGACCGGTTATCGTGA 199854 29 100.0 32 ............................. CTGTAGGTGGTGACATCGTCGTACGGCGCGGA 199793 29 100.0 32 ............................. GTACTGCTCCCGAGCCTGCTGCCAACGGTAGT 199732 29 100.0 32 ............................. TATGCTTTCATAACGGCGTGTCTTCAGGAGAA 199671 29 100.0 32 ............................. CCGAAGCGCCGCAAAGTCGTGTTCAAAAGCCC 199610 29 100.0 32 ............................. GCGGCAGCCTCCCTGATCGCGTAGAAAACGCC 199549 29 100.0 32 ............................. CCGAGATGTGGCGCCGAAACGAGCGCGAGCGC 199488 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 199427 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 199366 28 79.3 0 A..........A..C.....-..A....T | C [199357] ========== ====== ====== ====== ============================= ================================ ================== 28 29 98.8 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTAGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGTTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGTGAACAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //