Array 1 109393-110751 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJPL01000001.1 Crateriforma conspicua strain Pan14r Pan14r_contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 109393 36 100.0 30 .................................... CTGGAGCGAAGCCTGACGGTCAAATCGATC 109459 36 100.0 29 .................................... GTTTCGCGTCGTGAATGTCTTCACGCTGG 109524 36 100.0 29 .................................... TACCAGCCATTGTCTCGCTCGTCGACTTG 109589 36 100.0 30 .................................... GTAAACACAGCGGGCCTGTTGCCAAACTCC 109655 36 100.0 30 .................................... TCAGCCAAGCGGCCTGACGTTTGAAAAGCT 109721 36 100.0 30 .................................... ACGGCTTGCTAAGGATAAAATCCCATTGTC 109787 36 100.0 30 .................................... CTTTCCAGTGGTTCGGCTTCGGCGACGATC 109853 36 100.0 30 .................................... CATTCCGTTGCGCCGTCGTGAACAGTCGCC 109919 36 100.0 30 .................................... GTTCAACAGTTGGCAGCCCTTCGTCGCTGC 109985 36 100.0 30 .................................... GCTGGAACGCTTCGTTCATCGTGGCGACGC 110051 36 100.0 31 .................................... TGCGCCGCACGCATGGACGTTCTTGCAAAAG 110118 36 100.0 31 .................................... CAGCACCGGAAACCAGCAGCGTTTCCAAGAC 110185 36 100.0 29 .................................... GCGTACGTGTGCCTACTCACGTACGCGTA 110250 36 100.0 30 .................................... CTGCTGCTGGTAGACACGCTCAGGTACAGG 110316 36 100.0 30 .................................... ACCCGCGAAGCAATCAAAGTGATCGTGCAG 110382 36 100.0 30 .................................... AGCTTGGCGGTTCGCTCGCGAGTGGGTCAG 110448 36 100.0 30 .................................... CCACACGTGCGACTGGCGAAGCTTCGCGCG 110514 36 100.0 31 .................................... CGAAGAATCGTATCGGCCGCGGATTCGCTTG 110581 36 100.0 30 .................................... TTCGACAGCAAGGTTTGCAAGCCAACAAGA 110647 36 100.0 30 .................................... ACATCCTTTCCCTTGCACCCTCAGGGGCCG 110713 35 88.9 0 ............................-A...G.T | TT,G,G [110735,110739,110741] ========== ====== ====== ====== ==================================== =============================== ================== 21 36 99.5 30 AGTGTATCTGACCTCGGCCTGCGACCAATCCGCAAC # Left flank : CGACTGAACTTGGCGGCGAGCATGGTCCGCTGAACGTCGTCGTCCACCGCTATGTCAACCAATTCGGAGCTTGCTTGAGAGGTGAAACTAAAACTCTTGACTATCCCAAACGAGCAACACCGTGGAACTGAGTGGATATCGAAGCATGTGGACGATCGTCATGTTCGACCTGCCGGTCGATACACCGAAAGCTCGCAAAGCTTATGCGATGTTCCGCAAGCAACTCCTCAGTGACGGCTTTTTTAAGCTGCAGTTCAGTGTGTACGCTCGCCCTTCACCGAGCAAAGAAATTGCGAATGTGCATGTCGCTAGAGTAGAACGATGGTTACCCAACGCCGGAGAAGTCCGAGTTCTTGAGATGACGGATAAGCAGTTCGAAGCAATGAAGATCTTTTGGGGGCGAAAACGTCGTCCTCCTGAATCAACACCTCAACAACTTGAGTTTTTTTGACCGAGTTGATGTCGTAAATTCTTTGACGGTAAAGTCTTACAGCAGAGGT # Right flank : TCTGCTCGTTCGTAAAACGGGACTTCTTCATGGTCATCATCTCCTTCAAAATGACGGCCAAATTCGAACCCGGTTTTCTCACTTCCCGTGGCTCAGTTTTTCGGTTGCAGGTCACATTCAGCCAGACGTCTTATCTGCCGTTTTGGTCGATCGGCCATTCGCCCAGAAGATGCTCGTCTTTCAACAACGCCGCCGTCGACTGGTCAGACTCTGCATCGCTCGGGCCGGTATTCGCCAAGACACTCAACAGCCCCACGTCCCAGTCGTCATGGCTGGTCGACACTGTTTGGTCGGAGTCAGGACTGGAACTGTCCCCAGAACTGGTGCGCAAAAGATTGGTTGCCAGGTCACCATGAACGTCCAGTGCCAGTTCGTCCTTTGAATCAGGCTGATCCACGGACGTCGCCGTCGGAACAGGCATCGATGCAATCGACGTAGACGGCGATTCGGGTTCGCCCGTTTGCGATCGACGGATCAAAAAGTTGATCACTTGCAGGGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTATCTGACCTCGGCCTGCGACCAATCCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 2 609460-610514 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJPL01000001.1 Crateriforma conspicua strain Pan14r Pan14r_contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 609460 36 100.0 38 .................................... TCGACGATTCCGCTGCTGCGGACGACGCGGGACGGGGA 609534 36 100.0 36 .................................... GAGTGTTTGTGAGTGAGTGCCAGATCCAGACAAGTT 609606 36 100.0 36 .................................... TACTCGGCCCAACGTGCAATGGGAGCAGACTTTGAC 609678 36 100.0 37 .................................... CAGCGTTGGCCGCCGACAGCGAGTAAGCCGGTGGACT 609751 36 100.0 35 .................................... ATGGTCCCAACGATACTGTGTTCGCGACAGGAAAG 609822 36 100.0 36 .................................... GACGACAAGTCGGTCGTCAGTGTGCTTAATTGGTCA 609894 36 100.0 38 .................................... GCGGCTTGCCACTCGTGTTGACGTTGGTGCCGCTCCGT 609968 36 100.0 36 .................................... GCCATCACGACGCGGTCCCCACTTTGGTCTGCCTTT 610040 36 100.0 38 .................................... AGACCGGTGACGGGCACGGATTCGCGTGGGATGAGCTG 610114 36 100.0 37 .................................... AAGAAACGGATGCTGGAGCGTTTTGGCGAGGTCGTCA 610187 36 100.0 36 .................................... GGGTGGCCGGGCTCGATCTTTGCCTGGTACGCCGGT 610259 36 100.0 37 .................................... GATGATGGACAAGGGCGAATGGGGCGCTTGCTGGGAC 610332 36 100.0 37 .................................... GCAGAGATCGCTTTGCGAGACAAATAGCATCCCACGA 610405 36 100.0 37 .................................... CCATCGCTCCAATTTTTCAACTCGATGCCGCGTGATG 610478 36 94.4 0 ..................................TG | A [610509] ========== ====== ====== ====== ==================================== ====================================== ================== 15 36 99.6 37 CTTTCCGCGTTCAAAAGAACGCGGCCTCATTGAAGC # Left flank : ATCGCTGAATCGGCGGTTTTGTCAGCGATCAATAATCGGATGGTCACACCGGAGCATTTTCTGGTGGCGGGCCAATCGGTCGTGCTGACCGACACGGGCCGCAAGCACTTCTTGATGGCGTACGAGCAGCGGATGAACGCCACCGTGACTCATCCGCTGTTTGGTTATCGGGTAAGTTATCGACGGCTGTTGGAGATTCAAACGCGATTGCTGGCCCGACTGCTCAGCGGCGAGATCGACGACTATCCCGTTTTCGTGACTCGGTAGTACGATCGCTGCGAGATGTAGTTTGTTCGGTACGAGATCTGGAAAACGGGTCAACGAGTTGGTGCGAGCGGTAGGATGGTCGCGAATTCCCGGCCACCTCTCGCAGCCCAGTAAAACGCGGAACCAAAGGGCCCCAACGACCTGATGTTCACGCCGTCGAAATCCGCCGCTACGCCCACCGCTCGCAAGCTGCCGCTGAAATCTGCTAAATTCCAGCACCTCAACACGGGGCA # Right flank : GTATCGTTGGCACCCAAATCGTCTGGATTGATAGCGGGTGTTCGATTGAGAGAGGACGCTTCTTTCGCGGAGCGAAAGGCGACTTTGGGTGATCGCCAGCGGGCGTCCGGTGGGAACCGAACTTGGCCAAAGGTAAGCTATCTCGGTGCAGGCCCCGCGACGGAACCGGCCGTCGTGCATGGGGAAAACGGCGATCGATGATTTTTACCGAACACCATAGACGCTAGACATGACGATAAAACGACGACATCTCCTTGCATCAACAGCCGTCGCATCTGTTGGCGTGGCACTCTGTGGGGCAACCGGGCCCGACCACTCGACTGAGTCAAGCAGGTCGATGGACATGACACTGGAAGATCGACGAAGATGGCTCGCCTCGTTCTCCTGCAACATCGAGATGTGGTTCAAAGATCTTGACTTTCTCGACCGCATCACGGCGGCGAAAGAAGTCGGCTTTGACGCGATTGAAATTTGGAATCCCCAGAAAAAGAAGCTTGGCG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCGCGTTCAAAAGAACGCGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //