Array 1 179179-181289 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJMM01000003.1 Legionella pneumophila strain 2532STDY5467651, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 179179 37 100.0 35 ..................................... TTTGAATTAAATCTGCTTTACTTCCGGGGCCGCCA 179251 37 100.0 35 ..................................... GTGTATGTATCCGCTGCCAAATGGATAAACATTTT 179323 37 100.0 34 ..................................... AAGATCATATATTAAGTTGGTCAAATGAAAATGA 179394 37 100.0 35 ..................................... AAGAAAATCAATAAATCCAAACAACCAACGAATGT 179466 37 100.0 36 ..................................... CTTCATTGCAGGGTACAGTTGAAAATTCCCTTACAG 179539 37 100.0 34 ..................................... TAAATGAATTTTCAATGATTTTAGCGGCTTCGAT 179610 37 100.0 33 ..................................... CCGGATAAAATCGGCAAGGCTTGTGGGTGACGA 179680 37 100.0 35 ..................................... CTTTGAAAAGGCTCATACCTTGTTACCCCTTGCAT 179752 37 100.0 33 ..................................... AGAGTGATCACTCTTGAAGATGCTCTTGGTTGG 179822 37 100.0 30 ..................................... TGATAATTTAAGAACATATAATAATTCTTT 179889 37 100.0 33 ..................................... ATGAATAAAAATGTCTCTAACATGTCAATTCTC 179959 37 100.0 35 ..................................... TACAATTAAAGTATATGAAGCATTCAAAGATTTCT 180031 37 100.0 35 ..................................... TTCCATTCGGCGGCACGTTCGCTGGTTGGATCAAC 180103 37 100.0 35 ..................................... AATATAACACCAATGATTCCGGTATAAATCACTAA 180175 37 100.0 36 ..................................... GTCTCTCCAGAAGAACAGGCCAAGCGAAATGAAGAT 180248 37 100.0 34 ..................................... TTTAATGTTCTTTGTGCAGTCATTGATTCAGGTA 180319 37 100.0 35 ..................................... TTATCGTCTATAACTACTAGACCGTCATCAGTAAC 180391 37 100.0 34 ..................................... ATAATACGGTTTTGTAAGCCGTCTAATTCACGTG 180462 37 100.0 35 ..................................... TCTATTAACAGCCCATTAACTGATCGACAAGGACG 180534 37 100.0 33 ..................................... ATTGCAAGCGGGTTTGATCGTGTTATTATAAGA 180604 37 100.0 34 ..................................... TTTATTTAGTCGTTTAGAAACCATGCGCCTCAAT 180675 37 100.0 35 ..................................... GTACTGGCCGACCAGACTACGGTACTTCCTGATCC 180747 37 100.0 35 ..................................... AAAACTTTCATTTGTTAAATTACGCATTTCATTTA 180819 37 100.0 34 ..................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 180890 37 100.0 35 ..................................... ACACCTACACCGTACTGAGCACCATAGTGTTCAAC 180962 37 100.0 35 ..................................... CTTCCTGAATTAAACTTATTGTGTTAACTTTTTCA 181034 37 100.0 34 ..................................... TTGCTGATGCTTCTCTAGCTGCTGATTCTTGTAT 181105 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 181178 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 181253 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 30 37 99.5 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //