Array 1 60436-63270 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOLL010000013.1 Eggerthella lenta strain MSK.15.90 NODE_13_length_91613_cov_268.428, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 60436 33 100.0 34 ................................. ATGCCCGGTGACGCATCTCCCATCATCTCCGGCA 60503 33 100.0 33 ................................. AGGAACGTGAAGCCGCGCGTGAGCTTCGTCATG 60569 33 100.0 33 ................................. GAGACGGTCGCCCGATCGTCCGATGACGGGGAG 60635 33 100.0 33 ................................. ATCACTCGCAGCATCTTGGGAAACCTCCTTTTC 60701 33 100.0 34 ................................. CGTCGCGTGGTGCAGGGCGCGCAAACGCTGTCCA 60768 33 100.0 35 ................................. AGCTCCAATACCATTTTAAATTTTACTTCCAACGG 60836 33 100.0 38 ................................. AACGAACGCTCCGACATTGACGGCATCTCCCGTAGGGA 60907 33 100.0 35 ................................. TCCAGCGCGCTCATGATGGTGGCCCAGTCCATGGC 60975 33 100.0 33 ................................. TTCGCAGCCGCGCCTTTCGTGGCCATGTCTCGC 61041 33 97.0 34 ......T.......................... ACTCCGAGCGACTCGCCCGTGCGGGCGCTGCCGA 61108 33 100.0 34 ................................. TTGGCCGCTCATCGGTACAGACCAATCGCAGGAA 61175 33 100.0 33 ................................. GTTGTCAAGCTCTGCTTCGCCTCCCAGTCAATG 61241 33 100.0 33 ................................. GGCCAGCAGCGCGACGCAGCGCCTCATGGCGAC 61307 33 100.0 33 ................................. CTGTAATGCCTGATCTGTTTGCCGATGTACTCA 61373 33 100.0 33 ................................. GAGAGCGCGGAGCATATGACGCAGTGCGTCTGC 61439 33 100.0 33 ................................. GTCAACGCCGGTGGCACGTGGCCTGCGTCCCTG 61505 33 100.0 32 ................................. ACGCGGCTGCCGTCCTCCATGCGCGCGTCCAT 61570 33 100.0 33 ................................. GAGACCGAAAGCCGCGATTCGTCGAGCATCGTC 61636 33 100.0 35 ................................. GCTTTCGTCTGCTACCTGCTCGTCAGGGATGCGCG 61704 33 100.0 33 ................................. CGCCTGCTTTGCAGGGTCTTGCAGATCGGCGGT 61770 33 100.0 35 ................................. TCCTTGACGTAGAGATAGCGAAACTTGCCGTAACG 61838 33 100.0 33 ................................. AACTTTATCACACTGTCTCGGCTCGATAGCTCC 61904 33 100.0 34 ................................. AAGCGCGGGATGCTCGTTGATCTTGTCTACTACA 61971 33 100.0 34 ................................. CGGCATGGACGGCGATGATCTTGTTGAGGGCGTG 62038 33 100.0 33 ................................. GGATGCGAACCAGAAGAGCTCTACGGTCTCAAG 62104 33 100.0 34 ................................. CATACTGTGAAAGGGGTATAGCCAGGTTCGACGG 62171 33 100.0 34 ................................. CGTCTGGTGATCTCGTCCATTCGATCTGCTCCCT 62238 33 100.0 33 ................................. CGTATCCCAGTACTACCCTGCGGTCGCTGGCGG 62304 33 100.0 33 ................................. TGCCATGCCCTGACCCCTTCAACGGTGGACATC 62370 33 100.0 33 ................................. CGACCTTGCGCGAGACGATGCCCGAACCGTCGG 62436 33 100.0 35 ................................. TCTCCGCTTTCGTCTCGCGGCCATTCCATCCCCGG 62504 33 100.0 34 ................................. CACGCACCCACCATGTGATAGCTGGTCGATCTGT 62571 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 62639 33 100.0 34 ................................. GTCTCTGCTGGAAGCCAATCGGTCTACATCGAAA 62706 33 100.0 35 ................................. GGGCATATCGGCATAGCATGGTACGAGGAAGCCGA 62774 33 100.0 33 ................................. AACAGAATGTCCTCGTCGTGGGCGCTGAAGCCG 62840 33 97.0 33 .....................A........... TGACGAGTATCGCCTATGGCTTGAAAGCGAGGT 62906 33 100.0 33 ................................. AAGCACACCACCAAGCAGACGCGCAGCCTCATA 62972 33 100.0 34 ................................. CAGAACTTCGCGATGGCGAAGCAGAGCGGCTACG 63039 33 100.0 35 ................................. GTCCCCGTCGGCGGCTTGGTGTCCATGCTGATGAT 63107 33 100.0 33 ................................. TCGTCCTCGCTGAGGAAGTAGGGGTCGAGCGAG 63173 33 100.0 32 ................................. AAACGGTTGAACGATTTGCGGACGCTGGCGAG 63238 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ====================================== ================== 43 33 99.8 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCTGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGGAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAACAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAACCAACGTACGAAGCTGAAGGGTTCTTGGCGTTGTAGGACCATGGTGCGAGCATGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCA # Right flank : CTGTTCGGGTTGGCTGGCAAGCTGAACGCTGACACGTCATCGTTCAGCTTGCGGGCGCGCGGGTTGAAGTCGCGAGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCTCAAACGAGGGGGTAACCGATCCTTGCCGTCGCTTCCTATCGAGACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGCCTGCGCCGAGTTGTGAAAGGCGCAGGCGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAGCTCAAACGTCGTGCAGTCCACCAGCCCGCGATTCGTCAGCCGCAGCTCGGGCAGGCATGCCAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAGGCATGCACCTTCTCGCTCATCGTCACAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //