Array 1 183758-180982 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKYI01000029.1 Raoultella ornithinolytica strain HH3 NODE_3_length_425795_cov_54.0758_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 183757 29 100.0 32 ............................. CCAGAATGGCGACGCCGCATACGGCAGCATGG 183696 29 100.0 32 ............................. GATTTTTTGAATAGCCAATTTTTATCAGCCCC 183635 29 100.0 32 ............................. AACCGCAATTACGCCACGGCCATCTCTTTCAC 183574 29 100.0 32 ............................. TCAGTGCTGTATAGAAGTTCGATAGCGTCCGC 183513 29 100.0 32 ............................. ATGAAGCGGGAAATGCTTTCACCGTCATATAC 183452 29 100.0 32 ............................. TAGCTTGTTGCGTTTCGCCATTTACATAGTGT 183391 29 100.0 32 ............................. CTGAAGAAAGCAGTAATCGATCAAATTAAGCT 183330 29 100.0 32 ............................. TTAAATCCGCGTCAAATAATAACACCATGGAC 183269 29 100.0 32 ............................. GTAACCGGTCATGGGAAGACGCAGATAAGGTG 183208 29 100.0 32 ............................. GTATCTTTATCGGTTTAAACCGGGAACAGGAA 183147 29 100.0 32 ............................. TATCTGCATCAGCGGTTGACGTTCCAGACTAC 183086 29 100.0 33 ............................. CCAACAGGGATACTTTTCGTGGTATTGATGCGC 183024 29 100.0 32 ............................. GAAGCTACCGTCGATGTGATCCAGTGCCTGAA 182963 29 100.0 32 ............................. GTGACCGGGCTGCACAGTCTGCGACCAAATCC 182902 29 100.0 32 ............................. CCTTCCGGGGTGAATTCCAGTTCGGCAATGCC 182841 29 100.0 32 ............................. GGTGAGCCCATATCCGAGAACCGCGGCTGTCT 182780 29 100.0 32 ............................. CAGAAATGCAAATGGCGATGGTTCGTATTTGT 182719 29 100.0 32 ............................. CAAAAAATGAAACGATCAGAGTCCTCAATACT 182658 29 100.0 32 ............................. ACCATCGATTCAGCGCAGCAGGAAATCCGCCT 182597 29 100.0 32 ............................. GGCGATCATCAGAATGCGAGTGGATGGCGTAA 182536 29 100.0 32 ............................. TTTGCGAGCGCTGCCAGTGTATCAGTGGCCAA 182475 29 100.0 32 ............................. AATGATACTTTCAGCAACATTGAAGGCATTGA 182414 29 100.0 32 ............................. CCTGAGCGCATCGATCGTTACAGCCAGATTGA 182353 29 100.0 32 ............................. GTGGGAGACTATCAGCTGTCAGTGCCTTATCT 182292 29 100.0 33 ............................. TCATCGACGCAACCGAGCTGCTGAAGTCCTTAC 182230 29 100.0 32 ............................. CGCACTCTTCACTTACCAGTTATGGGTGACGG 182169 29 100.0 32 ............................. AAAACGAAATACTGGCCATCGACCAGCTGATC 182108 29 100.0 32 ............................. AGAACATGCTCGCCAAAGAAACTCAGGCCATC 182047 29 100.0 32 ............................. TAAACTCGTCAGTGATTTCCAGCTTATCGCGG 181986 29 100.0 32 ............................. CAAAAACCCCGATAATCTTCATCTAGTTTGGC 181925 29 100.0 32 ............................. AACCCGGTACCGCTCACTGGTGGCAGCTGCGC 181864 29 100.0 32 ............................. AACCCGGTACCGCTCACTGGTGGCAGCTGCGC 181803 29 100.0 32 ............................. GTAGCGGCCACAGTATTCGGTAGCCAGCGCGA 181742 29 100.0 32 ............................. AACCTAAATCTGTTCGTTGATGGCCGGGGTTA 181681 29 100.0 32 ............................. GAACACGGTCGCCACCAGCGCGCCATCAATCA 181620 29 100.0 32 ............................. TGATTACCGCCGCTGGCTGTGGTCCTGCTTCG 181559 29 100.0 32 ............................. TTATATTCCATCCATTCAGCAGAGCAATACTG 181498 29 100.0 32 ............................. GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 181437 29 96.6 32 .............T............... GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 181376 29 96.6 32 ............T................ CTATATATTGTCTGGTCATCATCACCGACTAT 181315 29 100.0 32 ............................. TTGTCATCGTTCGAGAGCACCGTTGCCTTGAG 181254 29 100.0 32 ............................. TATCATTTTACCCTTGTAGTCAGTTCATCCAG 181193 29 96.6 32 A............................ AATCAGGGCGACGCGCTCTCGCGTGTGGTGCC 181132 29 100.0 32 ............................. CTGATTGGTTATGCACGGGTGTCCACCGGGGA 181071 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 181010 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCCGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTTTGGCCATCGGAGTAATTGACGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCAGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : CAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAAGGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGCAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //