Array 1 1564150-1559959 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT671858.1 Cuniculiplasma divulgatum strain S5(T) (=JCM 30642 chromosome I, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1564149 36 100.0 36 .................................... GCACCTGAACAGTCAGACAAACTCATGGGAGATCTG 1564077 36 100.0 36 .................................... ATCTAGGCCCTGATCTGGATGATCTGCATCTGTCCA 1564005 36 100.0 38 .................................... CATTGGTTTGCTGTGTATTGAACTTCCAGTACCATCGA 1563931 36 100.0 37 .................................... ATTGTTTCGCCTTCCTTGTTTGTTCGATCTCCTTTAT 1563858 36 100.0 38 .................................... TGGGATTGAAGGTATCTTCTATTTTCCGTAGGAGTGTT 1563784 36 100.0 37 .................................... CAGTTCGATTTTTTTATTTTCTATTATCAGGTCTGCT 1563711 36 100.0 36 .................................... ACAGAAGAAATCCCGTGAACAACGGCCCAGTATGGT 1563639 36 100.0 37 .................................... AAATGCCCTGAATGTGGAGCTGTGAATTCACAATCTG 1563566 36 100.0 37 .................................... ATTCCTCTTCCTGTGGGAGTTCCTCTGCGAGTTTTCT 1563493 36 100.0 36 .................................... TTTCTGTCATTTCCCGGTCTAGTATGTTTTTGAGGA 1563421 36 100.0 38 .................................... TTATGGTTCTGGTATCCATGCCTTTAAACTCCTTTATT 1563347 36 100.0 37 .................................... TTTGATGTTTGTTTCCCTTAAAGGCATTTCTGGAATG 1563274 36 100.0 37 .................................... TGGGTGTATATCGCATGGCTGTTGCTTATTGTCGATG 1563201 36 100.0 36 .................................... GTTTATAGTCTGGATAAATGACTTTACTGTTATCTT 1563129 36 100.0 35 .................................... CATTTCTTCAATTCCTCCTTATTTTTTGAATGATT 1563058 36 100.0 36 .................................... TCTCAAAACTATTATATCTACTATTCATTTTAAAAA 1562986 36 100.0 37 .................................... CCAGCTTTTCCAGTTTACAACATTCATATTCCAGATC 1562913 36 100.0 37 .................................... TGCCACATTTTCATTAGCACTCCGACTTGTATCACAC 1562840 36 100.0 37 .................................... TGCTGTAAACGGTGGAACAGGCTTACTCGGATAACTT 1562767 36 100.0 35 .................................... CTAATGGTGTTGAAAAACATGCTTCATCTATAGAA 1562696 36 100.0 36 .................................... ACTCGACCCATACTTTGTCAATGCTCTTATGGTAAC 1562624 36 100.0 39 .................................... GAAGAAATTTCATCTGTACGACACGAAATTGGTGTGGCA 1562549 36 100.0 37 .................................... ATGATTGCGTTAAAACTTGCAAGACTTTCCACGGAGG 1562476 36 100.0 37 .................................... GGCATGATATCATGGCTGTCGCACCCTATCCCATACT 1562403 36 100.0 38 .................................... CTCCACAGCTCTCCTGACTTTCTCATCAGGGGAAGAAC 1562329 36 100.0 38 .................................... TGGATCAGGCACCGGAAGTCCATTTAGTTCATAGATCT 1562255 36 100.0 37 .................................... GTGATCACACCTTTCAGGAACCTTATGCAATCTCGTA 1562182 36 100.0 37 .................................... GTCCCCTGAGCGTGCAGTTCTCGTCCTCAGTACTGGG 1562109 36 100.0 37 .................................... ATGTCGAGACGAACATGACGGTGGCAGAGCTGAACAA 1562036 36 100.0 36 .................................... GAATTGACGATTGCATTGACATTCTTACCAGTAACT 1561964 36 100.0 36 .................................... TTCAGTATCATCCTCAGTAAATCCTGCCGATACAGG 1561892 36 100.0 37 .................................... ATCTGGTACAGATTCAGTGTATGTAATCATTCACGAT 1561819 36 100.0 37 .................................... CAGTAAAAGGGAGCCAACCCAGAAAACCTTGGAGGTG 1561746 36 100.0 38 .................................... GAAGAAAATCTGGATAAAATACTCAAGATAATTCCTTA 1561672 36 100.0 37 .................................... ACGGTTATTGGGTCTTTGTATGTGGTACTTAGTCCGG 1561599 36 100.0 37 .................................... ATTATATGCATTGTGCCAGTGTTTCCATAGAGCCCAA 1561526 36 100.0 37 .................................... TATATAAATCAATAGAATCGCTTGTTTTCCCTATGTT 1561453 36 100.0 35 .................................... CCTTACCTGATACGATGGCATGACTTCATTACAAA 1561382 36 100.0 38 .................................... AGTTTTCAATCCCCTTACATTTGGTAAATATCAACTAT 1561308 36 100.0 37 .................................... TCAATCTTACAGTATGGCTGATGCTCACATGATAAGA 1561235 36 100.0 36 .................................... ACAAGGTCTTCATACATACCTCAATGTGCAGCAACC 1561163 36 100.0 35 .................................... AATACATCGATATCCTGAAATAAAAGAAAATTCAC 1561092 36 100.0 38 .................................... TTAACAATCCAACCATCTTCAAGGAAGAATTCCTTTAT 1561018 36 100.0 39 .................................... GCTGCAAACTGGATAATAGTATTTGGCATAGTCCTCTTT 1560943 36 100.0 38 .................................... AAACTGTTTACAACAAAAATCACCATCAAATTTCCATT 1560869 36 100.0 37 .................................... GTCATTCGATTGACATATTTTGTCATCAGTGATATGA 1560796 36 100.0 36 .................................... ACTACTACTACTAAAATATTTTGAAAAAAAACTATA 1560724 36 100.0 38 .................................... CCCATGTCTGGATTTTTCTCAAAAGCCGGTAAAACAAC 1560650 36 100.0 37 .................................... GGAGGAGTTTCTGGGATAGGAACAATAACAATGACTT 1560577 36 100.0 37 .................................... ACAAATTCCTCCTTCTGGTTGCAGGTTGGTGGAGAAA 1560504 36 100.0 37 .................................... CACAGATCTGGTGATGGCATTGGATGAATCTGACGCC 1560431 36 100.0 36 .................................... AATCTCTCACAGAAAGAAAGCGAAGAGGTCTGGGGT 1560359 36 100.0 36 .................................... AGGACAGAGACCTTAATGTCCCCTCCCTGAGTGAAG 1560287 36 100.0 37 .................................... GATTTCCCTTCAACAGTAACAAAGAATGCTACTGGTG 1560214 36 100.0 37 .................................... CGTTGTATCCCGTACTTGAAGCCTGAAAAGTTAAAGA 1560141 36 100.0 37 .................................... CTTTCTTTGCTGCGGCGACATGTCCCTCCACTTCTTG 1560068 36 100.0 38 .................................... ATGCAATCCATCCTTTCATATATCGAGAGTGCCCACTA 1559994 36 94.4 0 ..................................AT | ========== ====== ====== ====== ==================================== ======================================= ================== 58 36 99.9 37 GTTTCCATGATTGAATAATCATGGCTCTATTGAAGC # Left flank : TTTGTGATCTATCCGATAAAGAAAAGATTATTATGATCTCTGAGCTTTCTCACATATTAAATCATTCTGAGGATAGTGTCCTTATTTTTGACCTTGGAAATTCCAGTTCAAAATATCAAGATAAGATAATGTCAATAGGGAAGGTAAAAAAGTTTGAGGATCGTGGAGCAATCATTATATAAAGCTTGAATTTATCCTAATTTACCAATCGGTTTTGATGAAAAACACTGCCTTTGGCAGGAGGTGGAGAATTGGATCTCATCCTGATCGTTAACATCACTGCCTTTTTGCGAGAGGCGAACCTTTGATAATACTTCATTTCCCTCTCGATCTTGGTAATTCACGGTTTATGATGGATTATTCTAATGGGTAGCTTTCCACATCTTACTCTTGTTCCACAGAATATGGCCATTCTCTCGCAAAAATAAATTATCACGTATCAATATTTGAAGTTTTAGCTGCAAAAGTAAACTTTATACAAATACTAGTCATATATACCT # Right flank : TTATTTGTGCAAACATAACCATGAAAATGGTTTTTTGTGAATGTTTTTGGAAGACCTCATATTATTAATATCTCAGGAAAACAGGCGGAGAAAAAATGAGTGAAGAAAGGGCAGCAATACTTATTGACAACTATTATTTGAAAAAGGAAGTGCTGAATCACATGGAAGGCACCTTCAAACTTGATTATAAATCATTTTGTGATTTATTATGCCAGAAACATAATTCTTCTTTGTTTAGAACTTATGTGTATGATTGTGAGTTCAAATCAAATGAAGTCCTCCTTGACAGGTTAGAAAAACTGGCTAATTTTAAAGTTGGGCGTGGAGAGAAATAAAAGGTAGGATTTCATTTTGTACAGAAACAGGTAGATATCCAGCTTGCAGTGGACATGATCACACTCTCAAAATCAAATATACAAAATATCATTCTTGTATCTGGAGATACTGATTTCATTCCAGTAGTCAAATATGTCCAAGATCAGGGAACCATGGTATATCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATGATTGAATAATCATGGCTCTATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //