Array 1 9933-594 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBJ010000003.1 Psychrobacter sp. HII-4 isolate Psychrobacter sp. HII-4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9932 28 100.0 32 ............................ ATTTTGCATAGGGGTAAGTCATGTCATTTAAC 9872 28 100.0 32 ............................ ACAATAGCATCAATTTTAGTTTTTAGCCACTT 9812 28 100.0 32 ............................ ACTTTAACGAATGACGGTATCGGTGACGGTAT 9752 28 100.0 32 ............................ GCTAAGTAGAGATAAAATTTCTTTTTGACGCT 9692 28 100.0 32 ............................ CAAACGCGATCAGAAGCACATTAAAGCTATTG 9632 28 100.0 32 ............................ ACCTTTTTTGGCTTGTATCTGTGCATGAATGC 9572 28 100.0 32 ............................ TTTACAGCGCAAGACCTAGCTGCTTACGACAC 9512 28 100.0 32 ............................ TAGAGGATATAACAATGAATTATCCAGTAATG 9452 28 100.0 32 ............................ GCTAAAAACCCTATCTTGTTTGACTTTGACAA 9392 28 100.0 32 ............................ TTATAGCGCCGCTGATATTAGCTACTTGATAA 9332 28 100.0 33 ............................ CTGTCTTATCAGGTTGGCCAGTAAAGCATTGCA 9271 28 100.0 32 ............................ GTAGAGCCTTTAAAGCGGAGTCTTTAGCTTCT 9211 28 100.0 32 ............................ AAACGTAACTATAAAGCTCTTTTGATGTTTTT 9151 28 100.0 32 ............................ TTTACCGTTGGGATTTTTCCAATCACCGCGAT 9091 28 100.0 32 ............................ ACACGCCAAAAAACGTCTTGTCCCTCTACATT 9031 28 100.0 32 ............................ AGCACCGCCCTTTAGCAACCTTTTGCCGACCT 8971 28 100.0 32 ............................ AACAAGAAGCCGCAGGCTGGGAATGGGTGCTC 8911 28 100.0 32 ............................ GCTGGATTCGCTACTACGAAGCGCATAACGAG 8851 28 100.0 32 ............................ ACATGCGCTCTTCAGCGCCCACAAAGTCGCTA 8791 28 100.0 32 ............................ ATAACGCGGTAAAGCTCAGGCAACCATTGCTC 8731 28 100.0 32 ............................ TAAGAAAAGCCATCTCCCTACGATACGATAGA 8671 28 100.0 32 ............................ TTTTTCATTGGTTACTTGTTTGGCATAATCAT 8611 28 100.0 33 ............................ CAATAGACTTGCGGATCATCTTGCCGCCAATTC 8550 28 100.0 32 ............................ ACTGGCAAAGGTATTACTGCCAAAGGTGAATA 8490 28 100.0 32 ............................ TCACCAATCCCCACGCCTTGCGTCTTAGGTTT 8430 28 100.0 32 ............................ TAGACACCTAGTAATCCTCGATACCTCAAGCC 8370 28 100.0 32 ............................ ATATATGAGACGGTGTAAGTCTTAAAGGTCAT 8310 28 100.0 32 ............................ AGATAGCACAGCCGTCCGAGTTGCCGATATCC 8250 28 100.0 32 ............................ TGAGCGTATTGCGCTGTCATTTCCTGAGCATA 8190 28 100.0 32 ............................ ATGACTATTACTGGCAAGACAAACATCGCCGA 8130 28 100.0 32 ............................ AGAGCGCGACCCTGTGACCGGACAGACTTACT 8070 28 100.0 32 ............................ AAAACAATTTTGGATATACCTTGCCAGTTTAA 8010 28 100.0 32 ............................ CTTGACCGTCAAATTGACAGTTAAGGACTAAA 7950 28 100.0 33 ............................ CTGAGCGAGCAGGGCATGACTGTCACTGAGTAC 7889 28 100.0 32 ............................ AGATAGCACAGCCGTCCGAGTTGCCGATATCC 7829 28 100.0 32 ............................ GTTGTAAAATCAATGCCCATTGCTCTTGCTGT 7769 28 100.0 32 ............................ TGCGGCATTGTCGGCTTGGTTTGTGCATTAGT 7709 28 100.0 32 ............................ TGTCTGAGTGCATGATGCCAAGCAGTCCAGTT 7649 28 100.0 32 ............................ TTGCGATGTGGTTTATTATAAGTAAACTTTTA 7589 28 100.0 32 ............................ CTACGGCTCGACGGATATCAAAATGAGGGTCT 7529 28 100.0 32 ............................ GTTAAGCGTCAAAGTGCCAGCATCTAAATCAA 7469 28 100.0 32 ............................ TTTTGTCGCTGAGTTTGAGCGCATTGTAAAAG 7409 28 100.0 32 ............................ TCAAGTAGTCTTTTACGTTTATTCATCGTAGC 7349 28 100.0 32 ............................ TGCTGAGCCTTTTGACCCTGCTGGCATTATCT 7289 28 100.0 32 ............................ TGCTCGTCCTGCTCGACTTCATCGGTTTCAAC 7229 28 100.0 32 ............................ TGAAATCAAGTGTCCGTTTGGCTCAGATGCTA 7169 28 100.0 32 ............................ TATGCATATGTGTATGTGTCCCATCTTGTCAC 7109 28 100.0 32 ............................ TAACTACTTTCAAGCAAACCATAAAAATATTG 7049 28 100.0 32 ............................ TCAGCACGCTCTCTAAAATCTCGCATTGACTG 6989 28 100.0 32 ............................ AAAACAGACGGCTGGTAACAACGGTGAGCCAG 6929 28 100.0 32 ............................ GTCCTTGCGTCAGTATCAACAAGATAGCCAGT 6869 28 100.0 32 ............................ TGATATTTCCATGAGCTGCGGATAAGCTCGAC 6809 28 100.0 32 ............................ GTGTCAAATTTAAAGCCTCTGTGCGTAGCGTA 6749 28 100.0 32 ............................ GCTTTGATTGTTTGATATTGCTCTGACTCGTA 6689 28 100.0 32 ............................ GATGACGACCTTGCGCTAGACAGCACGGAGAT 6629 28 100.0 32 ............................ GGAGTCGTCAGAGGCGAGGAATTTAATAGCAT 6569 28 100.0 32 ............................ TAGACGATGCTGCTATTGGGCTGTATGAGCCA 6509 28 100.0 32 ............................ TCAGTGATTAACTCGATGATGGTGGGATTATC 6449 28 100.0 32 ............................ CATAGGTTGCCGCTTGCCATAAATTTATCCTT 6389 28 100.0 32 ............................ AGTACGGTCAATGACGGTTGCCAGTTGCTTAG 6329 28 100.0 32 ............................ GAGGCAGATAAGCCAGTCATCATCGAGTTAAT 6269 28 100.0 32 ............................ CTGAGACCGATGACGACCTTGCGCTAGATAGT 6209 28 100.0 32 ............................ CCGCTGATATTGAGGCAGCGGCGGCCAATGTC 6149 28 100.0 32 ............................ ATTCACAGTCAAATCGAACTTCTAGCCCGATG 6089 28 100.0 32 ............................ GAGCTTTTACCGTGAGCTTGAGCCGTTAGAGA 6029 28 100.0 32 ............................ GCTAGAGATGCTCACGGTTATGCAGGAGGTCG 5969 28 100.0 32 ............................ GAAAATCTGACGCATAAAAAAATCGCCACTAT 5909 28 100.0 32 ............................ TCAGCTATCCATTGTAGTGAGTTGATAGGCGT 5849 28 100.0 32 ............................ TTATGCTCAACAGCACTACTCAGCTATATCAA 5789 28 100.0 32 ............................ GTAACCACTATGTACTAGCTGACCGTTTACTA 5729 28 100.0 33 ............................ AGCCACAACACAAACCAGCATACGACCACTACG 5668 28 100.0 32 ............................ ATATCTCGCCGCGCTCACCGTCCTCGTGCCAT 5608 28 100.0 32 ............................ AACCGCTGAAATCGCTAAGCAGTGGAAAGAAG 5548 28 100.0 32 ............................ AATGGTGTACCTAACATACTGGCTTGGGTGTA 5488 28 100.0 32 ............................ ACAGTCGAAGAAGTAAGCGAAGCACCTGAGCC 5428 28 100.0 32 ............................ ATTCACTAAGGAGAGCGACATGAAAAAGAAAA 5368 28 100.0 32 ............................ TAGCGGGGCAACGCAAGGATTTAAGACGATGA 5308 28 100.0 32 ............................ CTGACCTTGCTTGATTGTTATTTCATTGCCTG 5248 28 100.0 33 ............................ CTGACCGCCTTTGATGATCTCGCCACGTTTAAC 5187 28 100.0 32 ............................ TCAGGCGCTAGTGGTATCGTGTACTTGTCATC 5127 28 100.0 32 ............................ TATAAAAAATACAGGTTTACGCATAATTACAA 5067 28 100.0 32 ............................ TAACCATGTACGACAACCCAAGACACATTAAA 5007 28 100.0 32 ............................ TACAACGTCAACACTGACGGCGGTTAAAGGCA 4947 28 100.0 32 ............................ TAAAGGTGATGCGTGATGACTGATTATTCAAA 4887 28 100.0 32 ............................ GAGAACGCCAGAGCAGCAGATGAGGAGTCAGC 4827 28 100.0 32 ............................ TAGCAATGGCGCCTGGTAACCAGTCGGATTGT 4767 28 100.0 32 ............................ GTAAGCAATCGGTAAACATGCAGTTTTGGCAC 4707 28 100.0 32 ............................ ATTCGCTCGCCTTGCAAACCAAACTCATCGGC 4647 28 100.0 32 ............................ TATGGTCAGGTTGGTCACGGTTGGACGTACCG 4587 28 100.0 32 ............................ TCGCTAACTTCGGTTAATAAAGACTCTTTGCC 4527 28 100.0 33 ............................ CTGACCTTTTTTAGCGCCTTTGATTGCGATAGC 4466 28 100.0 32 ............................ ACAGTTTGACCACCACGATACGAAACGTCATA 4406 28 100.0 32 ............................ AACCTCGACGCACAACTCGCAGCAGAGCGAGC 4346 28 100.0 32 ............................ ACCGATTAGGTGGTTTTTTATTGTCTAAAAAT 4286 28 100.0 33 ............................ CTTACCATCGCCTCGCATCTCAAGACCATCTGA 4225 28 100.0 32 ............................ GCAGATCACGACTTGTACTACGAACTCGCAGA 4165 28 100.0 32 ............................ TCTGCTGCTTGCTCGTAAATGTCGTGCCAGTA 4105 28 100.0 32 ............................ GTAATGCGGTATCAGGTTGCTAAATCGGCTAT 4045 28 100.0 33 ............................ GTGAGCCTGAGAAGTTTGAGCCAGTGTATGACG 3984 28 100.0 32 ............................ CGTTGAGATAAACGGTATCGTTTCACCGCGGC 3924 28 100.0 32 ............................ GCCCATGATTTGTAGATAATCAATCATGATTA 3864 28 100.0 32 ............................ ATGCGGTCAATAGATAGTGCGACATAGCGCAG 3804 28 100.0 32 ............................ CTTGCCAACCGCTGCTACGTGGCGGTTTTGGT 3744 28 100.0 32 ............................ ACATGATTGTCTTGGTCTGCGTCTTGCGCTCG 3684 28 100.0 32 ............................ TACCGCTTTTAACTGTTTTCGTTTCTGCCATT 3624 28 100.0 32 ............................ TTTGCCAGGCATCTTCTCCGATCCTGGCTTTT 3564 28 100.0 31 ............................ CCTGCCCAGTCTGTCGCAATGTCAGCGCGGC 3505 28 100.0 32 ............................ GGCAACAACGGTGAGCCAGTCAAGCCGAATAT 3445 28 100.0 32 ............................ GTCTTTGTGCTCAATCATTGTTATCTGTCTCA 3385 28 100.0 33 ............................ GAACAGTCACAGCAGCCAAAACAGACAGCCGGC 3324 28 100.0 32 ............................ GTTCTATCAAGGATTGTTTGCAATACTGACGC 3264 28 100.0 32 ............................ TTTTGGTTTAGCCACCACTGTTGGCGTGCGCT 3204 28 100.0 33 ............................ CATACCCAAGCAAACGCACCCATCAAGCGCGAC 3143 28 100.0 32 ............................ TGAGCCAACAGAGGCGGTCGAACATGATGAAG 3083 28 100.0 32 ............................ GATACCTTTCATAAAATTATCAACATCAAATT 3023 28 100.0 32 ............................ AATTGAGGCCGCCAAATGACCGAGCCATTTTT 2963 28 100.0 32 ............................ AGTTGCATGATGAAATCATCAAGGGTATTCGT 2903 28 100.0 32 ............................ TTCCAAGAAAATCATAAAAATCAGCAACATCT 2843 28 100.0 32 ............................ ACTATCTAGCGATGGTCTACCAATAATATTCG 2783 28 100.0 32 ............................ TAACGAATCAGGCCCATCAGGAAACAAATCAA 2723 28 100.0 32 ............................ ACACTCGCTGAACTTCAAGCAGACAAAGACCA 2663 28 100.0 32 ............................ AGTCACAAACGATAGTAGCCCAATCACAAAAC 2603 28 100.0 32 ............................ GTGAATTATCATTTGCTAGGGCTGCTATCAAC 2543 28 100.0 32 ............................ TTCTGATGCACCCGTTGGCAAAATATGGTCAA 2483 28 100.0 33 ............................ CTAACAGCGATTTAAGACCCTTTGACCATGATA 2422 28 100.0 32 ............................ AGCGAAAGACGTTGTTATTCCATTCTTGAGTG 2362 28 100.0 32 ............................ ATAATCTGCGCGGTTGTGGCAATTCGGGACGC 2302 28 100.0 32 ............................ ATAAAAACCGTAAAGAAGCCAACGGTCTAAAA 2242 28 100.0 32 ............................ CATGGTGCGTAGGTGGGCGGATTCTTTATAAA 2182 28 100.0 32 ............................ TATCCAACTTAGAAACAACAAAGACGGTTTTT 2122 28 100.0 32 ............................ AATCCAAAGACCGGCGATCATATCAAAAGTTT 2062 28 100.0 32 ............................ AGAAGAAGTTTATACCGAGTGTTTGACGCGGA 2002 28 100.0 32 ............................ ATACTGACCAAGCTTGCCGTTACCGCGTGCCA 1942 28 100.0 32 ............................ TAAAGCCGGGCACCCCAAAATACAATCAGACT 1882 28 100.0 32 ............................ CATGCTCTAAATTTAATCTTTCTCATCATTTT 1822 28 100.0 31 ............................ TCATGGTTATACCAAGCACTTATCTTTTTTC 1763 28 100.0 32 ............................ AGCCCAATAAACAAACAATCAACCCTTTTGAC 1703 28 100.0 32 ............................ TTGCTTCTTCGCTCGCCCAATCGCGCGTCTTG 1643 28 100.0 32 ............................ AGCGTCTCACTGGGGCGGCAACCAGTCCAAAA 1583 28 100.0 32 ............................ GTCAAGATTGACAGTGTATTGACTTAAATAGC 1523 28 100.0 32 ............................ CGGATATTTTTTGATATACGCCATTTAGTGTT 1463 28 100.0 32 ............................ TTATTTTGATTAAAACTGCACTTCGATTGATA 1403 28 100.0 32 ............................ CCAGCGAGCTGCATCTTTTAAGTGAGCTCGTA 1343 28 100.0 32 ............................ TGTTGTAATTATTTGCTCATATTGACGATTGT 1283 28 100.0 32 ............................ TGTACGCCACCATCATCAGCTAATAGAAGCTC 1223 28 100.0 33 ............................ CCTACCTTTGATAGTGTAGAAGTCAAAGAGCAT 1162 28 100.0 32 ............................ TTATTGATAGATATATCAATGCGGGTTTAGCA 1102 28 100.0 32 ............................ TGCTGTTATCGTCATCATTTTAGGCTGGTTTA 1042 28 100.0 33 ............................ TTGTCCGTCTGGTCAGCATTATGAGGGCGATGT 981 28 100.0 32 ............................ TGAGTACGCATTAGGCGGCTATGATCCCTATT 921 28 100.0 32 ............................ ATAGACGTTATGACCTTGCAGTAACTTAGCAG 861 28 100.0 32 ............................ AAAGCCCTAGAGTTCACAAGAATGGTGGTGGC 801 28 100.0 32 ............................ TTGAGCATCAACATAATCAGCCGACGCAAAAT 741 28 100.0 32 ............................ ACCTTCTACAGCTTTATAACCTAAGTCTGCTC 681 28 100.0 32 ............................ ATATTCTTTACGCCTTAGATGGTAAGGGTTTA 621 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 156 28 100.0 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATCAATGAGGTTGGTGACAAAGCCAAAGGGCACGTTGTGATCAGACGCTACCGCCATAAAAATGTGCTCAAGCAGGCTGAAGCATTCGCTGAGCACAAAAGCATTACGCTGGAGGCGGCACTGATACACTGCGCCAAACACAAGCAGGATAACAAACCGTATCCGTATATCAACTTAAGGAGTATCAGCAACAATCAACCCTACGCATTATCTATCATTCAAGAAATGGCAGATAATGAGACTCAAGGGTCGTTTAACAGCTATGGCATTAACAATGCGGCAGATAAGGTTACTGTGCCCCATTGGTAAGCTACTTATAAGGTAATGACGAATTACCCAAAAATTGGGACAAAAAACCCTTTTTTTAAGCTATTTAAAAACTTGTAATAAAATCAATCAGTTAGATTAGGGCGAAAAACGGAGGGTAAAATAGGGTGTTTCACTCTCCACGCCTTGTTGTAATTGAGTTTTTTGAGGTATAATTCCT # Right flank : TGCTGGGTTAAGCGCAACAGGTGTGACCCCTGCCGTCAAATCCGTATAACTAAACTTGGGAGATTTTAATTACGCAGCCTGACGATAATAGTCAAATCACACCTGTCTTGGCGATTTATAGCCCAAACCCTTTTGAATTCTAGTCTGATTGTAGTACAGCTCGATGTATCTAATAATATCGTTGATCGCTGCAAATCTAGTCTTATAATCCTGATGATATACCAGCTCGTTCTTTAAAGTGCCCCAGAAGCTTTCTATTGGAGCATTGTCGAAGCAATTACCTTTAGCGCTCATTGAGCCTGTAAATTGATGCTGCTTAACGATCTTGTGGTAGGCGTGACTACAATACTGGCTGCCTCTGTCAGAATGGACTATTAGTTTTTTGGCAGGTCGTTTGTTCTTGATGGCCATGTTCAATGCGTGACAGACCAAATCTGCGGTCATGCGTTTGTTGATCGCATAGCCGACCAGCTCTTTAGTGTATAAGTCTTTGACTCCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //