Array 1 631231-634364 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR822043.1 Streptococcus thermophilus isolate STH_CIRM_2101 chromosome STHERMO Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 631231 36 100.0 30 .................................... TAACAACCAAGAGATGGTAATATTGCCAAA 631297 36 100.0 30 .................................... AACTTGATAGGGTTTTTGAAAACGTCTGTA 631363 36 100.0 30 .................................... TGGTAACTCTTTAGGTAAAATCTCAGCTTG 631429 36 100.0 29 .................................... CTAATGCGCGTGTTTTCCTAAGCCCTACG 631494 36 100.0 30 .................................... TATCTGTAGAATATTGTTCCAATATGAATA 631560 36 100.0 29 .................................... GAATTAAGACCGTAGCTCAACAACAGGAA 631625 36 100.0 30 .................................... CACCAGTTTTTAGCTTCTTCTACTGGCTTC 631691 36 100.0 30 .................................... TCTAATTCTGTCACCACGACTATATCGCCA 631757 36 100.0 30 .................................... TTGGGGATAATTTATGACAATAATAATTAG 631823 36 100.0 30 .................................... TTAGCGGTGATTGGAATAGAATAAGCGAAT 631889 36 100.0 30 .................................... TTAAGAACAATATCATCAATACGACTTTCA 631955 36 100.0 30 .................................... CATCTATCAAATTCAAATTCGGATAAACTA 632021 36 100.0 30 .................................... GACTTATCTTGGAAGGTAGTGAAGGCACTT 632087 36 100.0 30 .................................... TCCTTGCCATCTGCACTGTAAGCCCAAGCA 632153 36 100.0 30 .................................... TTTCGCTACGGATATAAGAAAAGTGCTCAA 632219 36 100.0 30 .................................... AAAAGGAGGGGTGTGATTAAGTGTTAGCAA 632285 36 100.0 30 .................................... TGGGTGATTCTATCAACAACTACCTAAAAG 632351 36 100.0 30 .................................... TGGTAACTCTTTAGGTAAAATCTCAGCTTG 632417 36 100.0 29 .................................... CTAATGCGCGTGTTTTCCTAAGCCCTACG 632482 36 100.0 30 .................................... TATCTGTAGAATATTGTTCCAATATGAATA 632548 36 100.0 29 .................................... GAATTAAGACCGTAGCTCAACAACAGGAA 632613 36 100.0 30 .................................... TCTAATTCTGTCACCACGACTATATCGCCA 632679 36 100.0 30 .................................... TTGGGGATAATTTATGACAATAATAATTAG 632745 36 100.0 30 .................................... TTAGCGGTGATTGGAATAGAATAAGCGAAT 632811 36 100.0 29 .................................... CGTATCGAAAACGGCGATAATCCAACAGT 632876 36 100.0 31 .................................... CAATACCTTTTTTTAATTCATCTTGATAAGT 632943 36 100.0 30 .................................... CATCTATCAAATTCAAATTCGGATAAACTA 633009 36 100.0 30 .................................... GACTTATCTTGGAAGGTAGTGAAGGCACTT 633075 36 100.0 30 .................................... TCCTTGCCATCTGCACTGTAAGCCCAAGCA 633141 36 100.0 30 .................................... TAGTACGCATAATCAATTCATCAAGCTTGA 633207 36 100.0 30 .................................... GTAGTGACCCAAAATTCTATGACCTTGAAA 633273 36 100.0 30 .................................... AGATTGTGGTGCTTACGGAAAATTCCTTGT 633339 36 100.0 30 .................................... TGGCAAGAAGTGTAAGAGATGCAATGGATA 633405 36 100.0 30 .................................... TTTATTATCATTATTCTTCTTCCCAAGCGT 633471 36 100.0 30 .................................... TTTTATAGAATTTGGTGGTGAACTTTTTCA 633537 36 100.0 30 .................................... AATGGGTCACAGATTGCCATAATAAGGAGG 633603 36 100.0 30 .................................... CCGAGGTCACTTTAGAACCCACAAAATAAG 633669 36 100.0 30 .................................... ATGAGAGAACACAGTATAGACCCTGATACA 633735 36 100.0 30 .................................... CAGTATTAATGAGGTTTGGGTGGTCATTCC 633801 36 100.0 31 .................................... CCATACTCTCTATCAGTTCATTTAATTCTTC 633868 36 100.0 30 .................................... TGAGAGTGTCTGATGGATTTATTGGTAACC 633934 36 100.0 29 .................................... ACCTCATACATGGGGAAAACTTGTAAGTA 633999 36 100.0 30 .................................... TATTTCACGAATTTCTACACTTTTCAACCT 634065 36 100.0 30 .................................... CTGAAACCTTGTTTTGAAGCGCTTGGAAGT 634131 36 100.0 30 .................................... GTCAATTGATACTGCAATCTCTTTAACATT 634197 36 100.0 31 .................................... ACTTCAATATGGTCAACATCTTGATCACCGA 634264 36 100.0 29 .................................... CGTGCCATTGTTTCGGTCGGACGTGGGCA 634329 36 94.4 0 ..................................GT | ========== ====== ====== ====== ==================================== =============================== ================== 48 36 99.9 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : ATTGATGGCTTTATCTCAGAAGAATCTTATACTATTTTTTATAGGCAAATCTGTCATCTGGTCAAGAAGTATCCAAATCTAACCTTTATTTTGTTTCCTAGTGACCAAGGCTATTTAAAAATTGATGAAGAAAATAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAACATTTGTATGATGTTGAGTTTATGTATGAAAGGGTAATGAAATATTATCCAAGTAATGATTTTCCGACGAGAGAAGGTTTTAGGATGTCTTTAGAAACTGTGACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCTCACTTGTTGATTCAGTAATATTGAATATCCTAAATCAGCTGTTTCATTTTAGTTACCGTATAAGATGTTCTCAGACACCTGATAAGGAACTATTACAGAAATTTTTAGAAAGTAAGGATTGACAAGGACAGTTATTGATTTTATAATCACTATGTGGGTATGAAAATCTCAAAAATCATTTGAG # Right flank : TTTGATTCAACATAAAAAGCCAGTTCAATTGAACTTGGCTTTTTAAAATACACGATAAACATAAGGATTGTCAGGCTGACTAACCTCTTTAATCTCAGTCAAATTAAGGATAGGGAGGCTCTGTTTAAGGTTTTGATAATAATTCACAGTGATGGTACCAGTGACTGTTACCCAGGTATTATCCTTAAAGGTTTGGTCGCTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATACCGAAACGGAAGATGAACTGATATCCCTTGGTCTGTGGATCATTGTAAACAAAGCCGGTATAGGTGACCTTCTTGCCCACGAAATCGTTTGGATAGAGATAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACATCCCTTGTACTTGGCTAGCTCCTTGGTCATTTCCTTCTCATAAGCTGATGAGGTGAAGTAGGAGCTGGTGTCCGGCCTTAAGTACTGGGTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //