Array 1 57468-62465 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHNV010000074.1 Bifidobacterium catenulatum isolate Bifidobacterium_catenulatum_JG_Bg468, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 57468 33 100.0 34 ................................. TATACGCGGTATGAGGATGTGGTTGCCGAGTGTG 57535 33 100.0 33 ................................. AGTGTGTGCATGTGTGCATTGCCAGCATGCTAA 57601 33 100.0 35 ................................. ACCCTACAACGATACGGACACTTCATGCCTGACGC 57669 33 100.0 35 ................................. AAGTCGGGCGTGTTGTGGAAATCAATCCTCCTTGC 57737 33 100.0 34 ................................. TCTTCTTCGGTCGGCGGTGGGGTAGTGGTTTCCT 57804 33 100.0 33 ................................. AATTCGCGCTCTGATAGGACAATTCAGACCCTC 57870 33 100.0 34 ................................. CTCGGCCTTGTATCCGTCGATGCGGTTCAGGAGG 57937 33 100.0 32 ................................. AGTGCTCATTGGTTTTCCTTTGCTTGTTGCAA 58002 33 100.0 37 ................................. CGAGCAGATGGAGGCGTTCGGCACGTCCGCTTCCAAG 58072 33 100.0 34 ................................. AACCATGCTTCGAACAGAGCGTCATCCTGCTGCA 58139 33 100.0 34 ................................. GCGGCGAATGCGCTGCACCTCGGTCTTGGTGAGG 58206 33 100.0 33 ................................. GGATAGTCCTTGCCCATGATCGCCAATGCCTCG 58272 33 100.0 33 ................................. CCGCACTCCGACTTCACGTCCACCAGCTGCCCG 58338 33 100.0 31 ................................. ATCCGGATAGTGCGACCCCAATGCTCCGGGG 58402 33 100.0 35 ................................. GGTCGAGGCGTTTTGTTTTATCGAACGAATGGACG 58470 33 100.0 35 ................................. TCCGAGTTGGCGGGTCTTGGCGAAATGCTGCGAGA 58538 33 100.0 33 ................................. GCCAATACGACGACCAGCGCGAAACGTCTATGG 58604 33 100.0 36 ................................. TTCGACCGAGCCGACTTCCGGGAGGCCAGAAGGGAG 58673 33 100.0 33 ................................. GCATGGAATACGATACGCTTGGCGACATGTCGG 58739 33 100.0 34 ................................. ATCACCATGCTCAGACAGGCCGGCCTGCCGCTTG 58806 33 100.0 34 ................................. CGATTCGACGTGCCCAGCCGGTTTTGCGCACTTG 58873 33 100.0 32 ................................. TCAACAACCTCAACAGCCTTTTCGTCGCTGTC 58938 33 100.0 34 ................................. ATATTTCGCGTGACTATATCCTGCAAACTGACAG 59005 33 100.0 35 ................................. CTTACCGCTCCTTATGCCTATATTGAATGCTCATG 59073 33 100.0 33 ................................. GAGCGAATTGATTACCATTATGTCGATGTTGAG 59139 33 100.0 36 ................................. CGCAAATGGGCCACCAGCTACACGCCATACCGGCCG 59208 33 100.0 35 ................................. TCCATGGCCGACGCCAACGGCACCGAAACCGTCCA 59276 33 100.0 36 ................................. TTGGACGGCGAAGGCAAGAGCAACGTGCTGACCGGC 59345 33 100.0 35 ................................. GTTGGTCAGATTATTGACGGTAGTCTCCAAAGTCG 59413 33 100.0 33 ................................. TTGTCTGTTTCAGAGCGCCGAACACGGTTGGCA 59479 33 100.0 35 ................................. CCTGGAGATCACCGGCAGGTCGAAGCGGCGAATAT 59547 33 100.0 34 ................................. TTTTCAACCCCTGCAATCCACGCGGATTGCGGGG 59614 33 100.0 33 ................................. ATGTCTGCTAATTGCATGGTCTGCTGATTGGAC 59680 33 100.0 35 ................................. AGATCCGGTGAGTGGCACGAATTTAATGTGGGGCG 59748 33 100.0 33 ................................. AATCCGAGCGTGATGAGCGCGCACGCGCCACCC 59814 33 100.0 33 ................................. TACGACACTTTGGAAATCTCACAGACGCTCTTG 59880 33 100.0 34 ................................. ATGACGTTCGGTGATGCGGCTGTCGGCGGCTACA 59947 33 100.0 33 ................................. ATCAGCGCGTGCAGGAGGGCGGGCGTGGAGCCT 60013 33 100.0 34 ................................. ACCGGGGGCACGATGCCGCTCGCCTAACCCTCTT 60080 33 100.0 34 ................................. ATCAGCCATAATCAGTCCTCCTTAATTCTGTTGG 60147 33 100.0 34 ................................. TCAAGACGTTGCTCGACGAAAACAAGGCTCGTGG 60214 33 100.0 37 ................................. CGTGTTGAACGCGCATATCTGTTCGGCGCGGTTGAGG 60284 33 100.0 34 ................................. GGATGACGAGCTGCTCCAGGAACTCGCACGCCGT 60351 33 100.0 33 ................................. AATGTTTGGGAGCTGGATGCAGTGCAGCCACTT 60417 33 100.0 33 ................................. AGTTATATGTGTCCCCGCCAGCCGGCATGGTGA 60483 33 100.0 35 ................................. TACGACACCTTGGAAATCTCTCAGACACTCTTGCG 60551 33 100.0 36 ................................. GTTCCGTACATTGTGTTTTTTTACCTTTCTACTTGT 60620 33 100.0 35 ................................. CTCGTTGTATGCGTAGGCGTTTCCGGCGATGTTCA 60688 33 100.0 33 ................................. ACCATGTTTTAGTCCTCCCTCATGTAGTCGATG 60754 33 100.0 35 ................................. TCCCGCCGCCGGCAAGATGTACGATTCCGAGTCTC 60822 33 100.0 34 ................................. CAGTCGATGGTCATGTTGTTTTCCGCGTCGTACA 60889 33 100.0 35 ................................. ACGTCGGCGGAAATCGAAGGCATCGCCTACCAGCT 60957 33 100.0 33 ................................. TCCGGCAGGACGGTTATCTCGGCAAGACCGGCT 61023 33 100.0 34 ................................. GCGTTTGCCGCGGCCTCCCATTCTTCTTCGTCTG 61090 33 100.0 36 ................................. GCCCGCAGCATGTTGATGCCGTTATCCGCGCACCAG 61159 33 100.0 34 ................................. TGCAAAGTATCGGCGAAAGCGCCCTTGACGATCA 61226 33 100.0 34 ................................. GTCTGGGGTAAGCAGATCGTCACTCATCATCGGC 61293 33 100.0 33 ................................. CTTGACCTGCTTGACGGCACGCCGACCATCGTG 61359 33 100.0 35 ................................. GACGAACTCACCGATGGCCAGTTCACGCCGATCTG 61427 33 100.0 35 ................................. AACACGGTCAATTCCACCAGCTCATTACCGGTCTT 61495 33 100.0 36 ................................. CAAAAATGCCAAACATAGTGTTGAGTCCGGCTGCCA 61564 33 100.0 33 ................................. CAATAGTCATCGGAATGCGCATTGTCGTGCAGA 61630 33 100.0 34 ................................. TGCGTCATGCTTGCGTCGCGCGGGTTCGACTACA 61697 33 100.0 34 ................................. ACCCTCACCAAGACTGAGGTGCAGCGCATTCGCG 61764 33 100.0 33 ................................. TGGCAGATGCCGATGCATTCCGAGATGACGGCG 61830 33 100.0 35 ................................. GATGAGACTGATTCCGCCGACCGTGCAGACGAACA 61898 33 100.0 34 ................................. GGTACTGCAAACGACTACACGACAGACGTGCGGA 61965 33 100.0 34 ................................. TGGCATGGCGAGCAGTGGCAGGAAAAGACTTTGG 62032 33 97.0 36 .............T................... GTCATGCGTATGCCGGTTTGGATGTGGATGTTGATA 62101 32 81.8 33 ...A...-....CA..G...T............ AGCATCGAACCGGTGGAAGAAGAAACCAAGTAA G [62112] 62167 33 81.8 35 ...A...C..G..A..G...T............ CACGAATGCGACGAAGTACGATCATCCACAAACTC 62235 32 81.8 33 ...A...-..G..A..G...T............ GACCTGCACGGTGCCGACCTGTATCATGCCGAC 62300 33 81.8 33 ...A...C..G..A..G...T............ TATACGAAATACGCGGATGTGGATGCCGAACTG 62366 33 81.8 34 ...A...C..G..A..G...T............ TTTTGGACCGTTTGGTCAAGCGAAGCGTGACCGG 62433 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ===================================== ================== 75 33 98.7 34 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : CCAATGCCGATGAGGACAGCCTGTGCTTTTATAAACTTGGCGCTCGATATGCGGATAGGATTGAGCATTATGGACGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGTAAAATGGCATGGTGCCATAATGATATGGTGTGGGGTGTGCTGGGTTGAGTGTTTGAGCGTGTCGTCCGGTATTCAGAGTGTGTTTTCTAGCCAGCAGTATTGTGTTTTCGGCAAGGTGGCCGGTCTTGGAATGGTGTTTGTGCGAAGTGGAAGCGCTCATGATAAGGGACGTCTTTCGCACCTGAAAAACTATCGAAATCCGAATTGTGATTTTCGTGGGGCGTTTGAAAACTAAATAATGGACATTCTAATGAGACAGAAAGCCAGTTGCTCGTTTTAGACATGTTGTTCGTCGTCTCGGCTGTGTTGTTTGATATGCTTAAAGCTAGGCAGCTGGCTTGCGTCTCAAAAAGCGGACAAAAATGTCCAGCTGCACA # Right flank : CGACGTTGACCATTGGGGTATATTCCATGCTATGCCGGCCACGGCTAAGTTTTTGCGTGAAGTTACCGAGTAGGAGGTGTGTTGTGATTAGTGATGCCGAGTTTGATCGTTGGGGCGAAGCCGCCGAACGTGGCGATTACGGTGGAAGTAAGGGACCCGTGATGCATGGTCCTATTTTCCCAGTGGACGCCGATTATCCCGATAGTGTCTCGTTGGGTGTTTCCGCGGACATGTTGGCGTTGGTTGACGCGAAAGCTAGGCGGTTGGGCGTTGGGCGTGATGACGTGATACGCCATGCGATAGCGCGCGATCTCGTTGACGCTTGAGCATTGTCCCGGTTGCTTTTGGCTGCTGGGATTTTGTTTATTTGAACATGTTTGTCGGGGTTCCCGCCTGATGAAAATACCCCAAGAGTGTTCCGCACTCTTGGGGTATTGCTTAAAGCAAACTGATTTATAAGCTTTCTCGTTCTAACGTGGGGCGTTCACCGTCATGCTGCC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //