Array 1 95197-94051 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSTN01000005.1 Ligilactobacillus salivarius strain JSWX5_1 scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================== ================== 95196 36 100.0 30 .................................... GGTGGTGGAGTGATGTCATTAATTCAACAA 95130 36 100.0 30 .................................... TATAATCAAGGTCAATTACAACGTTATCCA 95064 36 100.0 30 .................................... GCCATTGCATTAGACAATTGTGTAATCACT 94998 36 100.0 30 .................................... AAACAATATCTATCAACAAAACCTTAGATT 94932 36 100.0 30 .................................... TTGTTTTGTCGCCTGCTTTCCAGTGGCAAA 94866 36 100.0 30 .................................... ACGAAGTTTTTTCAGACTATTACAGGATAG 94800 36 100.0 30 .................................... AAGCGTTTGATAATGTAGAAACTCTTAAAT 94734 36 100.0 30 .................................... ACTTCCCATGGGTAGTAGATAACACTTATC 94668 36 100.0 30 .................................... TGCCATGTTTATTCCTTCTTTCTTTATTGT 94602 36 100.0 30 .................................... GAATCATTAAGAGAAACTTATCAACAACAG 94536 36 100.0 30 .................................... TATGTCTTCTCTTTGCGTTCACTTCTGAAT 94470 36 100.0 30 .................................... TAAACCTAATAATTTAAGCATTTGAAATAC 94404 36 100.0 30 .................................... TTCAATAGCAGGCAAAACGATTCAATGCCT 94338 36 100.0 30 .................................... GTATCTATCATGAAAAAATTTATAGATACA 94272 36 97.2 84 ..................................T. TACTTTCTTTTATGATATAATTTAGGCATAATTTCAGAAGTATATTAAAGATCTTTAGGACTTGGAAAGTCACAGGAGGATTAA 94152 36 91.7 30 ..........C.............A..........T GATCTACGTTACATTTTCTTAATGTTCATA 94086 36 77.8 0 ......T...A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ==================================================================================== ================== 17 36 98.0 33 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCAAATTAGCAAAAAATATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGTTGAAAGACAAGCAATACTAAAATCAGTAAATGGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCTTTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAATTTACATGTGGAACTAAACAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAAATCTTGTTAAGGCGACTAACGCATCAATGTTTATAATTGAATTCACAGAAAAGAATGATCAGAGATTCTTTGAAAACTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAATAACG # Right flank : TAAAATACAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTACGATATATTATGGTTGATAATACAATATTATATGGTATATAATATAGTTGAAGATAAGATATAGAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGACTTATTAGATGGTTTAGTATTAGCGTTATTAGATAAGCAAGATTATTATGGATACTCATTGACACAAGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGCAGGTTAAAGAATAATGGTTTATTAGAGACATATGATCAATCGTATCAAGGAAGAAATCGTAGATATTATCGCATAACAGATAATGGGGAAGTACACTTAGAAAGAATAAAAAAAATGTGGAATGACTATAAAGTTAGTTTGGATGAAATTTTTGAAAAAACTAGGGAGGGGGAATAATAATGAACTCAG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //