Array 1 139266-138444 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AIHH01000050.1 Escherichia coli DEC13C gecDEC13C.contig.49_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    139265	    29	 100.0	    32	.............................	CGATCCGGGCGTGCCGTTTGTTGCTCGCGGTA	
    139204	    29	 100.0	    32	.............................	CAGATCGTTAAGGCAAAAACGCCCCAACGAAT	
    139143	    29	 100.0	    32	.............................	GCGCGCGACTACTGCCCGACCCGCCGACAACA	
    139082	    29	  96.6	    32	............................C	GACTTTGCCCGGATAAGCAATGGCGATACGTC	
    139021	    29	 100.0	    32	.............................	CTCCGACTTACCGTAGTGATGGCGCGCTGCCA	
    138960	    29	 100.0	    32	.............................	AATTTCTGGAAAAAAACAAATTCAAAAAATTG	
    138899	    29	 100.0	    32	.............................	TGACTGCGGTTCAAAATCTCCGGCACACGTCC	
    138838	    29	 100.0	    32	.............................	GCCGCGCCGCACTGGCGCTGGCACGGTATGCA	
    138777	    29	 100.0	    32	.............................	GAAGTCATGAAGACTTCGACTATTTCTTGATA	
    138716	    29	 100.0	    32	.............................	TAAACACAAGAAAAGGGCGGCACGGAGCCGCC	
    138655	    29	 100.0	    32	.............................	GATTTTTCGCGAACTATCCCGGCGTAATGCGG	
    138594	    29	 100.0	    32	.............................	AAAATTCCATTTTATTACTGTCGGCAATTTCG	
    138533	    29	 100.0	    32	.............................	GCATATTTCATGCAGCGTTCTGAATGAGTAAG	
    138472	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  99.8	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCCGGGAAGGCAGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.51   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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