Array 1 190296-191056 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LNIZ01000002.1 Trueperella bernardiae strain LCDC 89-0504 AQZ59_contig000002, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    190296	    29	 100.0	    32	.............................	TTTCTCGAACGCACTGTCAGCGTTCCAAGCCG	
    190357	    29	 100.0	    32	.............................	ATCCCGAGCTCGTCCCTGCGCGCGGCAAGAAT	
    190418	    29	 100.0	    32	.............................	GTTCCCAGCAATTCCAGAAAGATTCCGAGCGG	
    190479	    29	 100.0	    32	.............................	AGGCCTATAGGGATCTAGCGGTGGCGGGGGTA	
    190540	    29	 100.0	    32	.............................	TACTAGTATCACCCGCCGAGTACGCACACGCA	
    190601	    29	 100.0	    32	.............................	GCGATGACGGTCATTCGTCCTCGTTGCCCTCA	
    190662	    29	 100.0	    32	.............................	GGTATGGCGGCCCTTTACTACCCGAATGGTGC	
    190723	    29	 100.0	    32	.............................	CGATTTTGAGGGCGCGGAGCGACCGGCACCCG	
    190784	    29	 100.0	    32	.............................	CACATCATGCGCTTAAACGGGGACGCGCCCCG	
    190845	    29	 100.0	    32	.............................	CGGCGCATGGCCGCTCTGCCATCCTCGGCGCG	
    190906	    29	 100.0	    32	.............................	AGCTGAGCCGGGCCAGCCGATGCTTTGACTTC	
    190967	    29	 100.0	    32	.............................	AACTTCATCACACTCATCACTGGCGACCGCGG	
    191028	    29	  96.6	     0	...........................G.	|                               	
==========	======	======	======	=============================	================================	==================
        13	    29	  99.7	    32	CTCTTCCCCGCGCGAGCGGGGGTAATTCC	                                	       

# Left flank :   GGGATGCTGGCCACGCTCATGGAAATCCTCTCGCCCCACCTTCCAAGCCGCGACGACGACCGGCTGATCGGCGGGAGAAACCACGAGGTAGCCGGTCACACGCAGTACGGGGCCGACTAGTGTTCATCGTTATCACCGCGACCTCCATCCCAGATCACCTCCACGGCTACCTCAGCCGATTCCTGTCAGAGGTGGACGTAGGCACGTACGTTGGCAAGGTGTCGCCCGTGGTGAGGGACAACCTCGTCGGCCGCTGCCGCGAAGGAGCCGGGGAGGGACGAATCGTCGCGATTAGTAGCGACACGGCGATGGAGCAAGGCTTCAGCGTCCAGACATTCGGCGAACCCACCCGTATGATTATGGACATGGATGGGATTCTTTTGAGCTCCACCGTGACCGGCGTGCTTGACGACGACGGCTCGCAGTCCGAGCCGCCCATTCTGGACCGGGAAAACGGGTCAAAGGGAGGCCTGCTTCAGTAAAACCACAGGTGGGATGGT
# Right flank :  CACCTCGAAATATCTCGATATCGAGGTGGGATCTATTTGGCGAAGCGACTTCCAAAAATTGTCGGAGGCGGGAAGTACGCTGGCACCAACAGACAACGACAAGGAGGTTGTGCCATGGTAGTCGGTTACCGGGCGATCATGCGGTTGCAGGACGGCGAGGATGCCGTGACTGTAGCTGAGGAGCAGTTGCATCGCTGGTTGGACAAGAAGACGAAGGGACGGAACCAAACGCGGGTCCGTGCTGATTGGAAGGGCACAGGCGCCCACCAGCTGGGGCAAAACTCCACGTTGAGGGTCTATCATCACGCAGACGATGCCGATTCAAGCCGACGAGGGTTCTACCGGCTCACCAAGGAGAACGAGAACGGCAAGTTTACGGTGTCGCTCTACGCGGCGAGCCTGCCTCGGATCCGCGAATACCGCCAGACAATCGTGGCCGAAACAGCTTGGGAGCCGCCGGAGCACAGTGGAAAACTGCCAAAACGTCAGACGGGATCAGG

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTCTTCCCCGCGCGAGCGGGGGTAATTCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-13.80,-12.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.64   Confidence: LOW] 

# Array family : NA
//