Array 1 312915-310419 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNGR01000001.1 Vibrio parahaemolyticus strain F1_5 F1_5_contig001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 312914 28 100.0 32 ............................ TCACAGTAGATGATGAAACAGCGTTAGATCCA 312854 28 100.0 32 ............................ AAGCGAGAAAGACACAGATGCAGCGGAGCAAA 312794 28 100.0 32 ............................ CCACAAACCCGTCGGCAGTCCTGGCACTGTTA 312734 28 100.0 32 ............................ AGCCGTTGACGTTTTGACCGCTTCAATGTCAA 312674 28 100.0 33 ............................ GAATACGGAAACCGGCAAAGCCTATGCACCTCT 312613 28 100.0 33 ............................ GGACTAATGATTAAGGTTCGCCCGGACATTGAA 312552 28 100.0 32 ............................ AAGCTAATAGAATGCGCTCAAAACGCCCTGTA 312492 28 100.0 33 ............................ GAGTTCAGGGTTTAATGAGGGATGGAGTACTAT 312431 28 100.0 32 ............................ GCAGCGGCGTTTTGCTTCCACTGGTTGCGCAA 312371 28 100.0 32 ............................ GCAATGAAGCGTTGAGATTTGCCTTGCAAGTA 312311 28 100.0 32 ............................ TATCGCCTCATCCATGTCCGCAGCGGCGTTTT 312251 28 100.0 32 ............................ AGAGTCCCCAGTAATCGCAACCGGATACCCTT 312191 28 100.0 32 ............................ GCCAACTATTGGCGAGAGCAAGACAACTGGGT 312131 28 100.0 32 ............................ ATTCACGAATATCGCCCATTTGGGCTATGTCC 312071 28 100.0 33 ............................ TTCGATAAAGGCAGTTTGGGAATAATTGTTTTT 312010 28 100.0 32 ............................ CTAAAGTGTTATTGCGTGCAAGCTTTGTTACA 311950 28 100.0 33 ............................ ACAAGGTAACTTGGCGGCTATGGCGACCGTTGC 311889 28 100.0 32 ............................ AGACTGGTCTTGAATTAGCGCATCCAAATTGA 311829 28 100.0 32 ............................ AACTCGACCTTACCGACACTGCTTTCCTGCGG 311769 28 100.0 33 ............................ GTAAAAATGGCGCAACTATCCTAACAATATTCA 311708 28 100.0 32 ............................ TTATCAGTATGTTGCGGTTGGTCTTCCTACTG 311648 28 100.0 32 ............................ AGCCGCTGCCGCTGCCACCGCCTGTACAATAG 311588 28 100.0 32 ............................ CACGAAAGATTTCGAGTGGGAATTAAATAATC 311528 28 100.0 32 ............................ TGCCGCGCCTGTTTCCTCGTAACTAGCGCCAG 311468 28 100.0 33 ............................ TTTAGAAAGCGCGCGCGGCACTTGTCCAAATTT 311407 28 100.0 32 ............................ CATCCACTTGTCAGCAGTAACCGCGCTTCCAC 311347 28 100.0 32 ............................ AATTTGAAACCGCATCATTAACTTGCGTCGAT 311287 28 100.0 32 ............................ AGCCGCCATCTGCACTAGGATTATTATCTCTA 311227 28 100.0 32 ............................ TTTCGGTTCTTCGTTTTGGGGGCCTGTTGTTG 311167 28 100.0 32 ............................ GTCACTATCAATCAACTTCGTCAAGCGTTCCA 311107 28 100.0 32 ............................ TTCATCCATATGAGGCATTAAACAATAGTTGT 311047 28 100.0 32 ............................ AACTTGAACGCGCTCACCTGGTGCTGGTTCAA 310987 28 100.0 32 ............................ TAATACCCCACCTAGATTAGCAAATACCCCAC 310927 28 100.0 32 ............................ TTTCCGTGCTTATAATCTCATTTACAATGAGT 310867 28 100.0 33 ............................ TCCGCGACCAGTCCAAGTACCAGCGACATTTTT 310806 28 100.0 32 ............................ ATGTAAGCATTCCATGCTTTTGACCCTTTAAA 310746 28 100.0 32 ............................ AATAATCGGCGATTTAATCGGCATGATACCTG 310686 28 100.0 32 ............................ TCGCAATGGCACGGCTAATGAATCCGAATCTA 310626 28 100.0 32 ............................ ATTAACTCACAGCTGCAACACCAATATTTTGA 310566 28 96.4 32 .............C.............. TGCCCGTTGTTGTAGCGTTGACCATGCATCTA 310506 28 92.9 32 ..........A..C.............. GCCACGCGATACAGTGAGAACAACGGCCAATC 310446 28 85.7 0 ...A......A..C............G. | ========== ====== ====== ====== ============================ ================================= ================== 42 28 99.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTCCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAATCCATAATTATTCATATTTAATTTAATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATTGCTTGGAAATAATCGGTGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //