Array 1 62-3757 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOES01000053.1 Streptomyces rimosus subsp. rimosus strain NRRL B-2660 contig53.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 62 29 100.0 32 ............................. TCCCCGACCACGCGCACCTGCTCGGTGCCCCA 123 29 100.0 32 ............................. GTCCAGCGGGCGCCGAGCCGGGTGTGCGCGGT 184 29 100.0 32 ............................. TGACCAGCCAAAACGCCGATCCGGTGAGGCGG 245 29 100.0 32 ............................. GTAGATGATGCGCTGGGGGGGCGCGTCGGCGA 306 29 100.0 32 ............................. CCTGCGCGCCACGTGCCCCTCCGTGAGATGTG 367 29 100.0 32 ............................. ATGGTCAGCGCCGGGTACACCATCGACGACCT 428 29 96.6 32 ............................G TGGGTGTTTCCTGCGATCCAGGGCGGCAGCCT 489 29 100.0 32 ............................. AACCCAAGGCAGCTACGCAGCAAGACCTGCGG 550 29 100.0 33 ............................. AGGCCATCCGGCCGCACGCCCGCGAGCTGTTCA 612 29 100.0 32 ............................. TCGCCCCGGGCGTACAGCGGTATACGTCGACC 673 29 100.0 32 ............................. GTGTTGCTGCCGTCGCGTTGCTGTTGTTGTTG 734 29 100.0 32 ............................. TGCAAGACGGCCCCGGCGCCCGCCATCGCGGG 795 29 100.0 32 ............................. GATCTCCTGGGCTTCTGCGGTCACTCGATCGC 856 29 100.0 32 ............................. GTGGGCCGGACCACGTAGGTGTGCAGCCAGGT 917 29 100.0 32 ............................. CCGCGCAAAGGCGTCACCCACACCGTCGAGGA 978 29 100.0 32 ............................. TGGGGTGGCTGCTGGATGACGACGACGACGGG 1039 29 100.0 32 ............................. CACGACGGGCTCCCGGTCTGGAAGCCCCCGCG 1100 29 100.0 32 ............................. GCATCGCCGTACAGTGCAAGCGCTACGCACCC 1161 29 100.0 32 ............................. CGGGTTATGAAGGCGACCCGCGCCGACTCGCC 1222 29 100.0 32 ............................. TGAGCCGATACAACCTGACCGCCAGCGATGTA 1283 29 100.0 32 ............................. GTCAGCCACGCCAAGTGGGCACTGTTTGACTG 1344 29 100.0 32 ............................. GGGTCCACGTTCAGCAGCCGGTTGGTGGCCTC 1405 29 100.0 32 ............................. TGGTCAGCGGGTGCTGAGGGGGAGCGGCGTAC 1466 29 100.0 32 ............................. CAGAACGTCCAGAGCGCGGTCGTTGGATCCGC 1527 29 100.0 32 ............................. CCATCGGCCTCCGCGTAGATCAGGCTCTTGTG 1588 29 100.0 32 ............................. GACCGCTCCACGTAGATGCCAGCCGCCTGAAC 1649 29 100.0 32 ............................. GGTCAGGCCGGTGCTGGTGAACTGAGCGGTTG 1710 29 100.0 32 ............................. GGTACATCGCGCGCGCCAGGGAAGCGGACGGC 1771 29 100.0 32 ............................. TCGCCACCGTGCGTCAGATAGACGGCCGCTCG 1832 29 100.0 32 ............................. CTGCATATGCCAACTCTGGTAACTAGGTTGTC 1893 29 100.0 32 ............................. ATGGGCCGAAGCACGGTGGATCTACCGCTCAG 1954 29 100.0 32 ............................. ACCTTGGCCGCCATGGCACGTCAGATGCTCTA 2015 29 100.0 33 ............................. GTGCCCACGGTCAACGGGTACTACATCGCGCAC 2077 29 100.0 32 ............................. GGGCGTGGGAGCCACTGCTGATCCATGGCACC 2138 29 100.0 32 ............................. TGTCCACTCGGTCACTCGGCCACACCAAGGGA 2199 29 100.0 32 ............................. TTGAGGGCGCCCGCGGCGGCCAGCAGGTCGTC 2260 29 100.0 32 ............................. ACGGGCTGGTCACCCCGGAACACGTCTCCGAG 2321 29 100.0 32 ............................. CAGAACCGGCGGCTACGGGACGGAGGGTTGCG 2382 29 100.0 32 ............................. CAGAACCGGCGGCTACGGGACGGAGGGTTGCG 2443 29 100.0 32 ............................. TGGACCCCGGCCGCATTCGACCAGCTCGGCAT 2504 29 100.0 32 ............................. ATGCGCACCGCATCCCTCGTCGGGGCTGCCGA 2565 29 100.0 32 ............................. GCCGCACGGGCGGCATCCGGTTGGCCGACGTC 2626 29 100.0 32 ............................. TCCGCCACACACCACGGAGTTGCAACATAGCT 2687 29 100.0 32 ............................. GGCAGACTCGCCGTGCCCTTGGCGAAGAACCA 2748 29 100.0 32 ............................. CAGCTGCTGGCCGTAGCCCTCGCCGCGCAGGC 2809 29 100.0 32 ............................. GCTCGGCGGCGTGGTCCACGGTGCACCAGGGC 2870 29 96.6 32 .................A........... GATCTCGGCGTGATCGAATGCCAAGACGGGGA 2931 29 100.0 32 ............................. GGACAGGTTCCAGTTCGCCACTGGCCCGCCTT 2992 29 100.0 32 ............................. CTCACCAGCGCCCACGACCGCGTCGTGATCGT 3053 29 96.6 32 ........T.................... CTGGGTTGTCGCGACAACTCTGGTTTCGGTAT 3114 29 93.1 33 ...A............T............ AAAGTCGACGCGGAATTCGCCGCGAACCTGGCG 3176 29 93.1 32 ...A.............A........... ATCGAGAGCATGACGCGCGCCTTCGCCCGGCT 3237 29 100.0 32 ............................. GCTCCCACCTTGCCAAGTGGCTGGCCGCGCAG 3298 29 86.2 33 ..........TC..CA............. CTGCCCGACGATTCCCGCAACGGTGCATCTGGT T [3322] 3361 29 82.8 32 .............A..T.AC..C...... GGTCACACGCTTGACGCACGACCTATGAGACG G [3370] 3423 29 79.3 32 ....A..T.....A.....A...AC.... TGGTGGCAGGGAGCCAGCATTTCCGACGGCGC 3484 29 75.9 32 AC..........G.C......G..AC... TGGGTCTCGTGCTACGCCAAGCGGATAGCGCA 3545 29 100.0 32 ............................. GCTTCACCGACACCCTGCGCCGCGGGCGCCTG 3606 29 96.6 32 ............G................ CGCGCTAAGGAGGCCGCGGTGTCGTACGTGCC 3667 28 89.7 34 ..........G............-.G... CAGCCCCGACGTGTACGCCGCGACCTGGTGGCGC 3729 29 82.8 0 A..........C..C......T..C.... | ========== ====== ====== ====== ============================= ================================== ================== 61 29 97.9 32 GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Left flank : GGAATCCCTGGAAGTAAGTAAAAACCCCTCCCTCGCCTGACAAAGCCGCTGGTCACGACCTG # Right flank : CGCACCACCGCCCCGTACACCGGACGCAGGTACCGGCGGCGCGCGGGTGCATATCCGGTGCCCTCGCGAGGCAGCGCACTCCCCACCAGGGAAACAGGAGCATCGGCCGCGGCACAGACCAGCTTCGCAAGGCCACGCTGTCTCGCGGGGCGGTGGAGAAAGTCTGTGGATGCTGTCGTGTGCGCCGCGGGCTGACGTTGCGCAGCGAATGGTCGTTCGACCTGGGTCGTTGAACCCCGGTTAAGCAGCGGTGCAGGGCTGCCTCAGTGTCCTTTAGGTGTCTGCTGGCGGTTTCTTGGCGCTGGTGGCGTGTGCTGTGGCTGTTCTGCTGCTGGTGCCGAGGAGGCTTCTCATGGCCGCAGCCCGACGGACGCGTGATCGGAGATACCGGCGCCTGCCGCTGGATCTGGTGTGCGAGGAGTTCGCCCGCCTGGTCGGCGGGTCCGGCCCGCTGGTGGTGGACGGGACCGTCTTTGCCCACCTGCCCGACCGGGTGCTGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-39] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //