Array 1 447426-446865 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAGYWQ010000001.1 Brochothrix thermosphacta strain BF1 NODE_1_length_1246654_cov_57.877704, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    447425	    36	 100.0	    30	....................................	TTTAACTTTATTTACTGACGTGATTGTTTG	
    447359	    36	 100.0	    30	....................................	TATTTCCTTATATCGTTCAATTGAAAAACG	
    447293	    36	 100.0	    30	....................................	AGAATATTGGAATGCTGTAGATTACGGTAG	
    447227	    36	 100.0	    30	....................................	TGATCGCATGTTCATGAAGCAACTGGGTCA	
    447161	    36	 100.0	    30	....................................	TGTTTTTTACCGTACTATCCACTTTTACAT	
    447095	    36	 100.0	    30	....................................	ATAACGCAAATACACAAAAGAAAGAGCGTA	
    447029	    36	 100.0	    30	....................................	CCCCATCGCATCAACGTGATGTATCTCTCC	
    446963	    36	 100.0	    29	....................................	ACGAAGAAGAATCAAGAAAAGATTTCATT 	
    446898	    34	  88.9	     0	..........................--.....G.G	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  98.8	    30	GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC	                              	       

# Left flank :   AAACAACGTGTTTTTATCACTAAAATTTATAAACAGCTAGAGAAACAGTATCATAATAATAAGGAAATCGATCTTATTAGAGCTCCGTCAACTTATAGGCATTCAGTTAAATGACTATGATTTACCGCTACAACTGAATGAAGAAGTAAAACTATCTTCGCTTTATAAGCTGTTTAATGTTACTATAGAGGTTGAAACAGAGTCGATTTTGGATAGATTATTACTACTGATTGATCTTGTCGCACAATTGAAAATTGCTCGTATCATTATTTTGAATAATGTAAGGTGTTATTTTGTAGAGCAAGAGCTTCTAGAAGTATACAAGTACGCACTTTATAAAAACATAAAGCTATTACTGATTGAACCAATCTTTAAAAAAGGCAAATTGCAATATGAACGAAAATTACAAATTGATAATGATTATATCGAATTTTGGCAGTAATACCTTCATTTTTGAATCGCGCAACGAGAGCAGTAATGACAAAATTTCATTGTTTGAG
# Right flank :  ATTGACGTCCATTGATATAATGGATGTCTTTTTTTGTTATCTATAACATTATTATGTTAACTAAAAAAGGAATTTAAAATAACATGACAAACGTTATTATGCAAGGTATGATAGAACTAGATTAACATTACTTAAAGGTGGTTGGAGGATGACTGGATTAAAAATTAAGCAATTTAAATTAGATAAACAGGCGATTAAGCAAATTAGTGATGACTATATTGTCGACTATCCAACTGTTTATTTGTTAAATAATGATAAAGAAGCGTATATCGGCGAAACTGTTGCACTGAAGAATAGAATGCGTTCTCATTTAGCCAATCCGCAGCGCAGTAAACTTACAAAAGCTCATGTCATCAGCCATAATGAATTTAATCAATCCGCCACCTATAATATTGAAACGAAGCTGATTAATTACTTTTTAGCGGATCAAAAATATATCTTACAAAATAAAAGTCAAACGGTTCAAAGTATCACTCATAACTACCATAATAAAGCTTATT

# Questionable array : NO	 Score: 3.20
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.78   Confidence: MEDIUM] 

# Array family : NA
//