Array 1 60608-51693 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFGM01000012.1 Acinetobacter junii strain RS03 NODE_12_length_72122_cov_21.0521_ID_7677, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60607 28 100.0 32 ............................ GCTTGACAGACAGATGGTGCCCAGTCACAAAA 60547 28 100.0 32 ............................ ATTAACATCAGGTTCAGATAGTTGGTCACAGA 60487 28 100.0 31 ............................ CATCACAAACCTCAAACGTCCCTACTCCTCA 60428 28 100.0 32 ............................ TTACTGGAGAACTCCAAAGGTTTATCAATACG 60368 28 100.0 32 ............................ ACTTGGTAAAATATTTTATACCACTTGGTAAA 60308 28 100.0 32 ............................ GAGTTCTTGTTGTTCTTTGGCCCAGTCAACAG 60248 28 100.0 32 ............................ TCACGTGTCTCCAGTGGGGTGAATTCAGTTAT 60188 28 100.0 33 ............................ GGCCAAAACGATAAGTATAATTGTTCCTTCTAA 60127 28 100.0 32 ............................ AGTGTTCCATTTGTTGCGTGTACACAGTGATT 60067 28 100.0 32 ............................ AAGATCCGAGAAGTAGATAGGCAACTTCTTAG 60007 28 100.0 32 ............................ AGATGCAATCTCTTCCATATAGCGAAAGTTAC 59947 28 100.0 32 ............................ CTTTACCTAAGGTTTGGCTGAAGGCTGAGAAT 59887 28 100.0 32 ............................ TATATAGACAGATTCACTTCAAACACGCCTCG 59827 28 100.0 32 ............................ ACGATAATCAGCGCCGTGATCAGTCGGAATAA 59767 28 100.0 32 ............................ ATTTTATCTATGAACTGGCAAGCAGTAGTCGC 59707 28 100.0 32 ............................ AAGGTGTACCTGTAACGATCCATCATGCGCCG 59647 28 100.0 32 ............................ TTTGTAATCGCTTCTTCTCGGCTTGTGGCAAG 59587 28 100.0 32 ............................ TAGATGAAAGGAATTACCGAGAGATGTGTTAT 59527 28 100.0 32 ............................ TGAAACAAACAGAACAGCAGAGTATGGAATTC 59467 28 100.0 32 ............................ TTATACACAAAGAGTCGGACGTTTGATAAACG 59407 28 100.0 32 ............................ ACTCTGATTTCCCAGACCTACACTATTGGCAT 59347 28 100.0 32 ............................ TTACATGCAAAAAACCATTAAATCATTGCGTA 59287 28 100.0 32 ............................ GTCGTCCTGCTGCTGGAGAGGTTGCCGTTATA 59227 28 100.0 32 ............................ TTGTCAAGCATGGTCGGTGGCAGTTAAGCAGC 59167 28 100.0 32 ............................ TATCTGATCAAGTAAAAGAGCTTACACGCGAA 59107 28 100.0 33 ............................ TCGCAAAGTAAAATATGGTCGGTCATATCGCCA 59046 28 100.0 32 ............................ ATAGATGATGAGCGCTTAACTAAAGCCATCGA 58986 28 100.0 32 ............................ AAGCCAAAGCGCATGAGGTGGCGAATCTGAGA 58926 28 100.0 33 ............................ GAAACAAAATAATTTAATTTATTTCTTTTGCAT 58865 28 100.0 32 ............................ TGATCATAAAATCTTGATTTATCCCGATGCAG 58805 28 100.0 32 ............................ ATCGTGTTTTGATTCCTGCACCACGATTCACT 58745 28 100.0 32 ............................ TAAGTTAGAACCTTGTCCTACGCTGGCAATGA 58685 28 100.0 32 ............................ ACTCAGCTAAACTACATTCTCTATCGCAATAT 58625 28 100.0 32 ............................ TTGTTCACCAGACATTACATGACCGATCATAA 58565 28 100.0 32 ............................ GTACTTTGTAGCACCGCCTCGATCTGCGGGAT 58505 28 100.0 32 ............................ TGTAGGTGCAGGCATATCTTATCCACTCATAA 58445 28 100.0 32 ............................ TATGAAGATGACAATACTAATCTAATCGTCTT 58385 28 100.0 32 ............................ AATGGAAATTATATTTCTAAAAGAGTCATACA 58325 28 100.0 32 ............................ CTAAAGCGTGGCAAGGAAATGGCAGACGCTAG 58265 28 100.0 32 ............................ AGTCCGAATTGCAAGAAGTTTGATGAGAGGGT 58205 28 100.0 32 ............................ CAAAACGATATGAGTTTTGGCGAGTATTTAAA 58145 28 100.0 32 ............................ TGATGGGACAACACATTTTGTACGGGCAACTT 58085 28 100.0 32 ............................ GCCGTTTTGTAACTCAATTTCAATCTTGGTGA 58025 28 100.0 32 ............................ TGAACATGCGGGAGATGATGAAAAAAGTGGAT 57965 28 100.0 32 ............................ AGGCGACATACCGAAAAGGCTATGTAGATGCT 57905 28 100.0 32 ............................ TCTAGCAACTTCCCAAAATTTTCATCAACATT 57845 28 100.0 32 ............................ CTAAAGGTGTATTAGCAAGAGCATATGTAGGA 57785 28 100.0 32 ............................ GTTATGCAACCTGATTCAACTGGTGGTAAAAA 57725 28 100.0 32 ............................ ACCCGATGCAACCAGTGCGATATTTTGGTTAA 57665 28 100.0 32 ............................ ATGAAACACCAAGCCCTTCATCCCAAATTCTG 57605 28 100.0 32 ............................ AAAAGGATTAGGAAACTGTCCAACTGGAACGT 57545 28 100.0 32 ............................ TGCATAAATACGACCAGTAAGCATTGATGACA 57485 28 100.0 32 ............................ ATACAAAAGGAATCAATATAAATGAAATACAG 57425 28 100.0 32 ............................ TAGTTTCTTTTTAGCAAGAACATAATTCGATA 57365 28 100.0 32 ............................ TTATCAATCAATTCATAATTAAAGTGCTGTGC 57305 28 100.0 32 ............................ ACATAGGCATTTTTAGATAAATTAGTGTTGTG 57245 28 100.0 32 ............................ TTTCGGGAAAATGGGTGTATTAGAAAGCACAT 57185 28 100.0 32 ............................ AGCTGCTAGAGGTTTGGTAAACTGCGAAATAT 57125 28 100.0 32 ............................ TGTTTCAATTGATGGGAACACCTGTAATGGTG 57065 28 100.0 32 ............................ TGTGTAACTGTAGTTGCTGGATAGTTATTTAG 57005 28 100.0 32 ............................ TTACGCAATGATTTAATGGTTTTTTGCATGTA 56945 28 100.0 32 ............................ ATTGATGAAATCAACAAAAATTGTGGTTGTGT 56885 28 100.0 32 ............................ ACCACACCGCTGTTTAAAGCTGTTGACTCATT 56825 28 100.0 32 ............................ TGACGTAAGAAGATTTTCCAGTCAGCGTTCGT 56765 28 100.0 32 ............................ CTTGTCATGAGATTTTTGCAATTGCTGTTCTA 56705 28 100.0 32 ............................ ATAAGGGAGCAAAGGTCGAAAAAGGAAATTAT 56645 28 100.0 32 ............................ TGACCACCATATTCAACCTTATTTTTACGCTG 56585 28 100.0 32 ............................ GCACAGGTATTATTGGGAGACCATTTACCATG 56525 28 100.0 32 ............................ TGTCGGGCAACATCATGCTTCCCTTTATGCTT 56465 28 100.0 32 ............................ ATTAGTTATGTACGAAGTAGACACACCAAAAT 56405 28 100.0 32 ............................ AGTTGGTAGTTGTGATTTTCAATTTTTTTACT 56345 28 100.0 32 ............................ AAAGAAATTTATGCTTTCCCTGATAAAAATAA 56285 28 100.0 32 ............................ GTTCATATTTGGGGCACAAAACAAAACGGTGG 56225 28 100.0 33 ............................ CAAGCAAGGAACAAGAAAAAGAACTGATCAATT 56164 28 100.0 32 ............................ AGTCTTCGCTAAATACTAAACCACCTCTAACA 56104 28 100.0 32 ............................ ATGTAATATCGGCAGCTTTTTTAATGGTTTCA 56044 28 100.0 32 ............................ GGTTGAAATTGATAGCTTTAATACAACAACAT 55984 28 100.0 33 ............................ TCAATACATCTTTACCGATGAAGTAGTTAATAA 55923 28 100.0 32 ............................ GTCCATGGGGAAACCCCTGAAAGATTTCATCA 55863 28 100.0 32 ............................ TTGGTGATGAACCGAGGTTTTAAATACTGAAT 55803 28 100.0 32 ............................ ACATTACATGATAATGCGGAACACCTTTTTTT 55743 28 100.0 32 ............................ ATTTCAAAATACGTGACGTATGATCAAAATGC 55683 28 100.0 32 ............................ GACCTTGTTACCGCCTTTAAGTTATTCCGAAG 55623 28 100.0 32 ............................ AATCTAGGTTGTGGCCTTGGGTAATAAGATAA 55563 28 100.0 32 ............................ ATGGAAGATGAGAGCTTCGACTTGGTTAAGGT 55503 28 100.0 32 ............................ TTAACGCAGATTGAAAATGCCAAATCACCACG 55443 28 100.0 32 ............................ AGTCCGTTATATCTATTCGGTCAATCGGAAGA 55383 28 100.0 32 ............................ GAATTGCAAAACCTATATCTGCAATGGGAAGC 55323 28 100.0 33 ............................ ATAAACCCCAAATAAGCATTAAAACTTCATCTT 55262 28 100.0 32 ............................ ATCAAGGCGGTAATCAATTATTTCAGTCAGTT 55202 28 100.0 32 ............................ TAGGGTGGTACTCAGTTTTTAAAATTATAGCA 55142 28 100.0 32 ............................ ACGTAAATCTAAAAACTCATTTCTCATTCTTC 55082 28 100.0 32 ............................ ACGCATTCCATAGGTCGAAGCCTTCTTCACTC 55022 28 100.0 32 ............................ AATTAAAGACCAAACCATTGACGGACTCGAAG 54962 28 100.0 32 ............................ AGTACAAGAAATCAAATACAGGTCTTAAAGCT 54902 28 100.0 32 ............................ ATGTGCATATGCTTGTTTGCGTGGCAAAGCGA 54842 28 100.0 32 ............................ GATAAGTTTTAGTGATTTAGTCATGATTAAGT 54782 28 100.0 32 ............................ TACAGGTGGAATCGGTTGACTCATTCGAGTAG 54722 28 100.0 32 ............................ TGTCCAACACTTTTGGAAAGGAGAATAAAAAA 54662 28 100.0 32 ............................ AATTTCTTCAACAACGACAGTGGCAGTATTAC 54602 28 100.0 32 ............................ TGTGAACCATCTGCATTCAGCATCGGTTCAGG 54542 28 100.0 32 ............................ TGCAGGAGAGCAAGGCAATGACGTACAGACCG 54482 28 100.0 32 ............................ TGCAGAAGCAAGGCGCACCGATTCACCCATGT 54422 28 100.0 32 ............................ ATAGACCGTTTGCGTAAGGCGTATAGCAACTC 54362 28 100.0 33 ............................ CTGTGACTTTTCCCCCGTGTTACTACGGGGTGA 54301 28 100.0 32 ............................ CAGAGCATTTGGCGTTATAAAAAAGATAATGT 54241 28 100.0 32 ............................ CGTTACAACATACCGTAATGGTACTCACTGAG 54181 28 100.0 32 ............................ TATACAGATAAAGCCACAATCATTTTCTAGTT 54121 28 100.0 32 ............................ GTTGGAGAAACATTAGGAGCAGCCCACTTAGC 54061 28 100.0 32 ............................ TCTTGATGCTTTGCTAAACGCTTCTGAGCATT 54001 28 100.0 32 ............................ CGTTAAAGAAGTTGAAAAAGAATTATTTAAAG 53941 28 100.0 32 ............................ GTATTGATCAACTTTATGACCAGTGACTTGTA 53881 28 100.0 32 ............................ AGTGACTTGTAATCTTTGGGTTTGATCTGGAA 53821 28 100.0 32 ............................ AAAATGTGGATCGTTTTTCCACTATCAATACT 53761 28 100.0 32 ............................ TTTTGAAGAGCAAAATAGTCCGACCGTTAAAG 53701 28 100.0 32 ............................ AATTCAAATCAAAATCGGTGTCGAAGGCACTG 53641 28 100.0 32 ............................ TTTTGATGGAATGAGAGTTTATGTTGTTGATC 53581 28 100.0 32 ............................ ATTCAAAAACAAACATCTTCTGCAAGTTCTGT 53521 28 100.0 32 ............................ ATTCAAAAACAAACATCTTCTGCAAGTTCTGT 53461 28 100.0 32 ............................ TGTCATAAAACTTTGTTTTCTTCCAATTCAAT 53401 28 100.0 32 ............................ TGACCCAACTGTTATATGTCACTGGAAAGCAG 53341 28 100.0 32 ............................ GTCCAGTAGCGAAAAAAGTCCACGTTCTCTAG 53281 28 100.0 32 ............................ TTGCACCAGGTCTCACACCAGGTGAAATTACC 53221 28 100.0 32 ............................ ATCCCAAAATCGCCAAGAAGAAAAGTCTAAGG 53161 28 100.0 32 ............................ TCGGAGGAACTTGCTAGAGAGCTGTTTTTAGG 53101 28 100.0 32 ............................ GTAATCAATATTTCCGAGAGCGAGTATCTGTA 53041 28 100.0 32 ............................ AATGTTCCCAATTAGATACATTAACTAATCAA 52981 28 100.0 32 ............................ ATTCAAAGTTAGGACGACCAGTGATGGGAGCG 52921 28 96.4 32 ........T................... ACGTGAAAACATTAATTGCCTAGCACCCTTGA 52861 28 100.0 32 ............................ GCGACGGTCGCTTGATCAATTTTCGCCGCAGT 52801 28 100.0 32 ............................ CCCGAGGATTGGAGCATTGACGCGGTCGAGGA 52741 28 100.0 32 ............................ TCACTTCATTGGCGGTAGTGGCGCCTCGTCCG 52681 28 100.0 32 ............................ TCGCGCTTGGGTGTCAGCGCTCTAAATGAATA 52621 28 100.0 32 ............................ AACTTATTCGCTATCAACGTGAAAATCCTACT 52561 28 100.0 32 ............................ TGACGCAATAGCGTGGGCGATAATGACGAGCA 52501 28 100.0 32 ............................ TTAGTCAATCTGTAAGCAATCAACTGGCTTTA 52441 28 100.0 32 ............................ AGTTACCAAAAATTAAAAAGGTGCCAGCATGA 52381 28 100.0 32 ............................ ATAAGAAACCTGACAGCTATTGCATTTTGGGC 52321 28 100.0 32 ............................ TGTATGACGATGTACTTCTAATTCTTTTACTC 52261 28 100.0 32 ............................ AACCCCAACCACTGCTGCTGCTACTGGCATAA 52201 28 100.0 32 ............................ TGCCATGAAAGCATGCCAACATTTATAGCTTT 52141 28 100.0 32 ............................ GTGCGCCAGTGGATCGCTCAATGTGGACGTCT 52081 28 100.0 32 ............................ GAACTCACAGCTAACATTGTGGGCGTGGCCAG 52021 28 100.0 32 ............................ TTATAGGGGCAGCGTTCTACCTGCATTTAAAT 51961 28 100.0 33 ............................ TGTGCCAATTTGCCCTGACACTTCACCGATGAT 51900 28 100.0 32 ............................ TATTTTCTTCTGCACAATCAATACAGCACAAT 51840 28 92.9 32 ..........A..C.............. ACAAAAAGGACGGAAATTAACTATCTGAAGCA 51780 28 92.9 32 ..........A..C.............. ATATCAGAAACTCTAAAGCTATTGGAGTGAGC 51720 28 89.3 0 ..........A..C.............G | ========== ====== ====== ====== ============================ ================================= ================== 149 28 99.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTAGATATTCGAAAATGGCTGGAACGTTTAGAAGATTATGTGCATATTACATCAATTCGTGAAGTACCTAGCGATATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGAGATATTGGCTTTGATGAGGCATTAGCAAGATATAGCAATGTAGTTACCACAACGAACTTTCCATATATCGAAATGAAAAGTCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCAAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATAGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTCTTTATGTTAAAACTATT # Right flank : TATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTAATTCGTCGGTCATCCCAATAACACGGCACTACAATCAAATGGTTCTCATGTAACCGAGACCATAATCTTACACCTAAATCCCGCTGTATATTTTGGACTGTGAAATTGGAAATCAGCAGGGTAGATTTCATATTGTCATAACGGCTATATAGAACCTTATGTACCATCTCTAGGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACTAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTTGTATAATAGCGTGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATAATTGATGCGCTCAGATGGGTTTTACC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //