Array 1 43235-44458 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBEU01000003.1 Ligilactobacillus salivarius strain CCuG2753OB CCuG2753OB_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 43235 36 100.0 30 .................................... GCAACCAAGCAAATTTATTGCCAAAAATTA 43301 36 100.0 30 .................................... GAATTGATGGACAAAGAGACCAATAGAGGA 43367 36 100.0 30 .................................... ACTTTGCCAAAATCAAGAAAGATACAGGTA 43433 36 100.0 30 .................................... CATCGAGAAATCATAACTGCCTTGACGATA 43499 36 100.0 30 .................................... AATTGGTGTATCCTGAAATCTACTTTTTGA 43565 36 100.0 30 .................................... ACAACAAATGTTAGCAGTGGCTGACTTACA 43631 36 100.0 30 .................................... TTATAACAAGAAAGATTTTTATCAAAATAA 43697 36 100.0 30 .................................... TTCAGATATTAGAAAGAAATATCAAGATGA 43763 36 100.0 30 .................................... TGGTCAAGTCGTCAATCTCACTAGGTGTTA 43829 36 100.0 30 .................................... AACCTAAGACACATACTCCAGCAGTTGATG 43895 36 100.0 30 .................................... TGAGGCTTATATGTCACAACTCAATGCTTT 43961 36 100.0 30 .................................... AATCTTATCGTATAATTACTAACATACGAA 44027 36 100.0 30 .................................... TTTTTTGATAGTCTGTAAACTCTAGCTCTT 44093 36 100.0 30 .................................... CGCAATTTTCGATATTTTACCAATCAACCC 44159 36 100.0 30 .................................... ACAACACTGGATATTTTAAGTTGAGAGAAT 44225 36 100.0 30 .................................... TTTAGTGGTAACTCTAGTGGCGTAGCTATT 44291 36 100.0 30 .................................... TAAAGACGCTGGATACACACCAATGGTTTA 44357 36 100.0 30 .................................... ACAACTGGAGTTTGAGTACGTTTAGCTTGT 44423 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.0 30 GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGTGAGATTTTGTATAAAATTGATATACCCTTACAAGCAGATTATGATAATGATTTAATAAGACTATTCAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAGTGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACT # Right flank : TAAAATACAAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGAGTAAACACACTATAGTGTGACATTACAGATAAAAAGGCCCTCAAAATCACATTTTCCTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //