Array 1 3715592-3710195 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP075188.1 Quatrionicoccus australiensis strain D9 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3715591 29 100.0 32 ............................. CGGCCAGGGACAGACTTGTTCAAACAAGGCAA 3715530 29 100.0 32 ............................. GGAATGCCTTTCGCCATGAGTCGGTCGCGCTC 3715469 29 100.0 32 ............................. GCGATACCTCCGCACCTGCACGGCGCTGGCGG 3715408 29 100.0 32 ............................. AGTTCGATTGCTTTGTCGTCGTCTTTGCCCAT 3715347 29 100.0 32 ............................. CATACGATAGCAGCGATGCAGACGATAGAAAC 3715286 29 100.0 32 ............................. GATTGACGGACTGCCGGCGCATCTCCTGTTGG 3715225 29 100.0 32 ............................. GTTCTTCACTACGCCAAGAGATGAGCCGCCAA 3715164 29 100.0 32 ............................. GAGGACCGCGACAATCAGACAGTAATGAAACC 3715103 29 96.6 32 ............................G TATGGGTCGGGCGATGAAGGGCAATTGCGCTC 3715042 29 100.0 32 ............................. GCCAGTCTATTCCTCGCTTGATGAGGCGCCGG 3714981 29 100.0 32 ............................. CCTTGCGCTCGCGCCTGGCTGCACGAAGTCAA 3714920 29 100.0 32 ............................. CATCACCATAATGGCCGCAACCGTGCGATGGG 3714859 29 100.0 32 ............................. TGGCCCGGCATCGTCGTCGCGTACTTTTCGGC 3714798 29 100.0 32 ............................. TTCGGCGAGTCGGATCATTGGTGCGGCCCGGA 3714737 29 100.0 32 ............................. CGCTGTGTCTCCGGCAAGCTTGCCCTGCCGTT 3714676 29 100.0 32 ............................. CTGCTGCACCCATTGAAGCTCGATGTTGTGGG 3714615 29 100.0 32 ............................. TGTACCCGTTCGGCGTTAATCCGTTGTAGAAG 3714554 29 100.0 32 ............................. GGCATGCCTGCATCGCCGAGCACGCCGTCATC 3714493 29 100.0 32 ............................. ATGATGTCCGGCGGATACTCCGGAATCGGCAA 3714432 29 100.0 32 ............................. GCGCTCCATCCAGTCCGGGGCGGTGCTGCCCA 3714371 29 100.0 32 ............................. TCGATACACCACTTCAAGCTATCGACAAAATC 3714310 29 100.0 32 ............................. CCATGGGTCTGGGTCATCGAATTCAAGCGAGT 3714249 29 100.0 32 ............................. TCAAAGCCGAGCAGCGCGCCGCCCTCGATGCT 3714188 29 100.0 32 ............................. TTTTGCCATGATTGTTTCCTTTCTTCATGCCC 3714127 29 100.0 32 ............................. CATCCTTGATCTTGCGCAGCGCGGCCAGCGTG 3714066 29 100.0 32 ............................. CAAGCGAAGCCGCCGAGCTGGCCAATGTGGCC 3714005 29 100.0 32 ............................. CGCCGACGGCGGGGTATTGGGCATCAAGTTCG 3713944 29 100.0 32 ............................. GGGAATAAAAGCGGCGCTCGGAATCTAATCCC 3713883 29 100.0 32 ............................. ACGCCGTCAATATCTTCACCAGGAATAATCAC 3713822 29 100.0 32 ............................. GATGCGCTATTGCCCCAGTCGTAGCCCTTGAC 3713761 29 100.0 32 ............................. GCACCGGCCGTCGCCGCCGCCGAGCTGATGCC 3713700 29 100.0 32 ............................. ATTTCCGGCCGCATCGGTCGGCATCGTCTCGG 3713639 29 100.0 32 ............................. ACGCGCATGCATGTCGCCGATGATTAGGGCAG 3713578 29 100.0 32 ............................. ACGCTGGTTCCTGGGTCGATTAGTTTTATTCT 3713517 29 100.0 32 ............................. TTGATCTTTTCATCGCCGGACTGCATCCAGAC 3713456 29 100.0 32 ............................. TTGGTAATCGAAACCCACGCCCGTTTGATGGA 3713395 29 100.0 32 ............................. ATGCGGCTCACCCATGGCGGCTGATGCTCTGC 3713334 29 100.0 32 ............................. CTGTCATCTATCGCTTCAAAAGCAATGTGCTC 3713273 29 100.0 32 ............................. CTGGGGAATCCCCCCAATTGCCCCGATGTAAT 3713212 29 100.0 32 ............................. TGTCGCGAGAGGAACGCGCAGGGGCCGGCGAA 3713151 29 100.0 32 ............................. TTCGGCGCTTCCTCTGGTTGCCGACCCTGATA 3713090 29 100.0 32 ............................. GTGATCTCGCCGCGCTCGATCAGCGGGGCGCC 3713029 29 96.6 32 ............................G GGGACGAAACGATCTCGCGGCACTGCCACGAA 3712968 29 100.0 32 ............................. TTCACCAAGCTGCTGGCCGGGTACACCGTCAC 3712907 29 100.0 32 ............................. TTCGGGATGCTGGATTACATGCAGCAGATGGC 3712846 29 100.0 32 ............................. TTGATGACGTGCTCGTTGGCGGCGTGGCTGGG 3712785 29 100.0 32 ............................. TGAAGGTGCAGAAAAAGCGGTAGCATATTCTC 3712724 29 100.0 32 ............................. GCCATTGAGCTGATGTACGGCGACCCGATCGG 3712663 29 100.0 32 ............................. TTATCGAACAATCATCTTAGGAGCATAGAACA 3712602 29 100.0 32 ............................. CAGTCACTACATCAAGTCGGCGGACGGTGGCG 3712541 29 100.0 32 ............................. TTTGTCCCCAAGGTCTGCTGCCTGCCGCACGG 3712480 29 100.0 32 ............................. TGCAGCGCATGATTCGGCAAGAAAAGCTTAAC 3712419 29 100.0 32 ............................. CGGCAGCCGGACGTGATGCGCCGCGACGATCT 3712358 29 100.0 32 ............................. TCGGGGGGGCTGCGGGCAAGCCGCCCGAGCCT 3712297 29 100.0 32 ............................. TTACGGTTACGCCGCCAAACGCTGGTCAGTTT 3712236 29 100.0 32 ............................. TCATCCGCACCCGAGTAGATATCCCCCAGGGC 3712175 29 100.0 32 ............................. CGTCCCGAAATCGTCCTCGATGGTGATGTCTC 3712114 29 100.0 32 ............................. GAGCGCTCGGGCAGGTTTTGCTTTACCGAGTG 3712053 29 100.0 32 ............................. CTCAAGGGTTTGGCCGGCACGTTTGCGGGCTG 3711992 29 100.0 32 ............................. GGCGATTGAAAAGGCTGTTCGCATAGCAGGAA 3711931 29 100.0 32 ............................. GAAAGACATCATCGGCCGCTGGCTGAAGCAGC 3711870 29 100.0 32 ............................. GAGAACGACTTGTGCAGGTTTAGCCTTGGAGC 3711809 29 100.0 32 ............................. GATGACGCCGACTTCGCCGCAGCATGGGACAC 3711748 29 100.0 32 ............................. AGCCAGACGAATGCCATCGCCGCGGGCGTCGT 3711687 29 100.0 32 ............................. GATGACGCCGACTTCGCCGCAGCATGGGACAC 3711626 29 100.0 32 ............................. AGCCAGACGAATGCCATCGCCGCGGGCGTCGT 3711565 29 100.0 32 ............................. GAGCCGCCATCGCCTGCGTATATCGAGTTCAA 3711504 29 100.0 32 ............................. ACGCCCGTGCTGCGCGGCATCCTGGCGGCGTG 3711443 29 100.0 32 ............................. TGGTCAGATCCATCGCTTAGCGCTACCGGGGC 3711382 29 100.0 32 ............................. GTCCTGGGCTATCACGTGCACTGGGAGCCATG 3711321 29 100.0 32 ............................. TTCGAGTTGATCGGCGGCAGCCCGACCGCGAA 3711260 29 100.0 32 ............................. TCGACGCGCGGTCGCTGCTGGGAGTACTCCGG 3711199 29 100.0 32 ............................. CCAGGCGCCGGCATGCGGCACGATGGTCTGCC 3711138 29 100.0 32 ............................. GACTGTTAAGCGGTTGCAATCGGTTCGGTCTA 3711077 29 100.0 32 ............................. CATGCGATAAATAAAAGAATAGGAACCGAAAT 3711016 29 100.0 32 ............................. ACGACGGTCTCTCAGCAGATCGGCGTGGGCGA 3710955 29 100.0 32 ............................. TCGGCCCAGATCGACGCCGGCCGGTATAGAAG 3710894 29 100.0 32 ............................. TCATCCGCGCCCGAGTAGATATCCCCCAGGGC 3710833 29 100.0 32 ............................. GGCCTGATCGAAGTGCCGGACGATGGCGACTA 3710772 29 100.0 32 ............................. TCGGCTGTCGTGCGAGGGTCAGCCTCCTCAAG 3710711 29 100.0 32 ............................. TCGGCTGTCGTGCGAGGGTCAGCCTCCTCAAG 3710650 29 100.0 32 ............................. GATGCGGGCCGCAGGTTATCGGAGAGCTTGGC 3710589 29 100.0 32 ............................. TCGGCATAGAACAGCGGCACGCGGATATTGGC 3710528 29 100.0 32 ............................. GGATGGAGCAGGGGCAGGAACGGCAGGAACTG 3710467 29 100.0 32 ............................. GCGACGTCGACGAGGCTGGCGGGCAGCTCAAC 3710406 29 100.0 32 ............................. GCGAAGCTCATCGCGTCGATGATGTCCGGCGA 3710345 29 100.0 32 ............................. ACGCCAGATCGGGGCAGCAGGTAATCGCTGAT 3710284 29 100.0 32 ............................. CAGCCATCGGCTTGAATGGAAAAGCCGGCGGC 3710223 29 86.2 0 ........................TTAA. | ========== ====== ====== ====== ============================= ================================ ================== 89 29 99.8 32 GGTTCCCCCGCGTTCGCGGGGATAGGCCC # Left flank : AAAAAAGCGATCAACGGGGACCAAACCAGCATTGACCGCCTGGTCAGACGCGAGGCGTCTACGGTGTTTCGGAAGCAGGATGTCATTGCCAGCATGATCGACAAGATCAAACAGGTATTGCGGACGGAGGAAAACGATGGCGCTGGTAGTGATCGTGACGCGTGATGTGCCATATCGGTTTCGAGGGTTTCTGGCTTCTGTGATGCTTGAGATCGCACCCACTGTTTATATTTCTCCTCGAATGAATCCCGGCGTGAGGTCGAGAGCCTGGGAGACTTTGGAGAGCTGGTTTTCGGCTGAGCCTCAAGGAAGCGTTGTGATGGTCTGGCGTGATATGAATGAAACGGGTGGGGTTGGCATCAAAACCCTGGGTGAGCCCCCAAGAGAACTCGTAGAGGTAGATGGCCTTTGGCTGGTTAAACGGATGTTGTAGAGTGCTCTTTAAAAATTCGGATCACTTTTGATGTTTTCTTTTGTAGATCATAGGGCTATCTACAAGA # Right flank : CTGGCAAATAGATAGGGCGTTTATGTTATGATATTTGCATGGATAAAGAAGATGCCCGCAAGCTCAGGCCAGAGCAACAAAAGGAGAAGCGCAAGATAGCGCTTCGCATGCGAATGAACGGACGCGAATTTGCCGAGATTGGATTAGCGGTCGGAGTACATTCCCGTACGGTCCAATATTGGTGGTCGCGCTACCAGGCAGAAGGCCTCAAGTCGGCGGTAGAAGGCGGCAAAAGAGGCACGGAGATTGGTGAGCGACGCACACTCAGCGTGGAACAGGAGTGGGCAGTGCAGCAGTTGATCAGCGAGAAAATGCCTGACCAACTCAAGCTTTCCTTCGCGCTCTGGACACGGGCAGCAGTTCAGGAGTTGATCCATCGTCGTTTCAAGATCGACATGCCGATTCGGACGGTCGGTGAGTATCTCAAGCGCTGGGGTTTTACACCGCAGAAGCCGTTGAAGCGGGCCTATGAGCAGAAACCTGAATTGGTGGAGGCTTGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGTTCGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //