Array 1 9887-11380 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAMA01000153.1 Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 strain type strain:CIP 110162, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 9887 29 96.6 32 ............................C AGTCGCCTTGATTGACAACTTTTTGATGTCTT 9948 29 100.0 32 ............................. AGCCGTTAGCGGTATAGGTGGTACAACCGCCA 10009 29 100.0 32 ............................. GATGAACGCCTTTCCGTCAATAACAAGGCTTA 10070 29 100.0 32 ............................. GATGAACGCCTTTCCGTCAATAACAAGGCTTA 10131 29 100.0 32 ............................. GCTGTGTGTGTTTGGAATGCTGTGTGTGCTTG 10192 29 100.0 32 ............................. TATTGCATCCACAATCTGCTCATATTCGTTGC 10253 29 100.0 32 ............................. TAACGACTATACAGAGATTAATTTTGTGATCA 10314 29 100.0 32 ............................. CACCGAACGCCCTGCAAATAACCGGCTCTCAA 10375 29 100.0 32 ............................. TTTTTGGCATTCGTTTTCATTTTGTAGTTAGT 10436 29 100.0 32 ............................. AATTGAGTGTTAATGTCATCGCTATTGCTTGC 10497 29 100.0 32 ............................. CTTGGTCCGCCACTATGATTTGCGGAAGGCTA 10558 29 100.0 32 ............................. TAAATAGTTATTACCGCCAATATCAATATTAC 10619 29 100.0 32 ............................. CAGCCCATCCACATACCGTTGGGTTTTGTTGT 10680 29 100.0 32 ............................. AAAAATTAAGTGAATGCATGCAAGTAAGCATG 10741 29 100.0 32 ............................. CTGATCGTAGCTTTTCAAGCTGTCGAACAGCA 10802 29 100.0 32 ............................. GATAGTACTGGGCGGCCGTTTGATCAAACGGA 10863 29 100.0 32 ............................. TTAAGCTTAAATTTAGTCAAATAATAATTAAA 10924 29 96.6 32 ............................C TTATAACGATAAGATTAGTGCTTATGAGTATA 10985 29 100.0 32 ............................. CGACTTTTCCGACTACTGATTGTGAAGATATG 11046 29 100.0 32 ............................. GAAATTTTCGATGTTTTAAGCAACGACATTAA 11107 29 100.0 32 ............................. GCCGTTTGTGCTTGTCCATCATAACCACAGGC 11168 29 100.0 32 ............................. TATCGAACGCTTCGAACAAGAAGAAGCAGCCG 11229 29 100.0 32 ............................. CGGTTTAGCACGATTCCTTAAATCTCAAGATC 11290 29 82.8 33 .........G.AA.C.T............ GGAGGATATGCATCTAAATCGCCACGCAATATA 11352 29 82.8 0 .......T.A.A....T.A.......... | ========== ====== ====== ====== ============================= ================================= ================== 25 29 98.4 32 GTATTCCCCTCGTATGAGGGGGTGATCCT # Left flank : GGTCTGGATTCTGAAAAGGATAGAATTTTGTCAGTTGGTGCCGTACGCAATGATAGGGCAGAGTTTTATCGGGTGATTAAGCAGGATGTCCAGATTAGCAAAGATATTGTAGATTTAACCGGTTTAACCCATGATATCGTGATGAAAGATGGGGTAGACGAAGTAGAAGCGATAAAGGAACTTAAGGAATTTGTCGGGGATGCTGTGCTTGTAGGCTATAACTTCAAGTTTGATTTGAGCTTTTTAAATCAGGCTTGTCGTTTACATGGCATTGATATAATTTCCAATCGTACTCGAGACCTAATGACAGTGGTAAAAAATAAGGTGGTTGAGCTAGACAGTTATAAGCTCAAAAGTGTACTATTGTACTACGGGATCAAAAATGACCGGCCACACAACGCGGTATCTGATGCAAAGGCGGAGATGGATTTGACGAAGAAACTCATTGAAAATTATGTTTTGAAACTATGAGAATGGCGTCAAATAAGGGATCTTTTAGT # Right flank : TCATTGCTCACATTGGGGATGTCGTAGTACCCCCCGATTTCCTCACACTAGTGAGGGCACCAAAAAAGCTTACCCCCTCAAGGGCAATGTCATTAAGTTAAGGCATTGATTTTGAGCGGGGAACCGCTTTGAGACACTCATCTAAGTTGAAGTGCCATAGAAAAGTTAGACATTTTAGAAAATCTTAAATAGTTGCCATTACACGATCTCTGTATTTTACAGGGGTCGTGTAATTTAGTTTATTGGACCGTCTGATGTTGTTAAACCAATATATGTAATCTTTAAGTTCTTGTTGGACTTCCTCCAAAGAATACAGTCTAACTCGATTTAGTCTCTCGCGTTTCATCAAGTTGAATATAGTTTCACCCGGTGCGTTATCGTGACAGTTTCCCTTTCTGGACATGCTTTGAACTAGTTCCATCTCTTCCAAGCGGGCTTGGTAGGTTGGACTTTGGTACTGAGAACCTTGATCAGAATGGATAACTGGGTGGGAGTAAGCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCTCGTATGAGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //