Array 1 187212-183953 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKSA01000003.1 Klebsiella pneumoniae strain EuSCAPE_IT211, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187211 29 100.0 32 ............................. CGGATCCGTAAGGTTTTTGATAAAAAAAGCGA 187150 29 100.0 32 ............................. GCAAAAAAGTGGGGGTGTGTATGTCTACAGGA 187089 29 100.0 32 ............................. GGATACGCCTTCGGGCTTGTGCCGTTTACGTC 187028 29 100.0 32 ............................. GATTTTGCTAAGTGCCACAATATTCCCCCCAT 186967 29 100.0 32 ............................. GCATTTCAGAGAGTGCACACCCGCTTGATGCG 186906 29 100.0 32 ............................. GCCGAAAAATCGTGCCGTGACAGCAGTTTGTG 186845 29 100.0 32 ............................. CAAAATCTCTGCGAGGAATTGATTTCGGGTCT 186784 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 186723 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 186662 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 186601 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 186540 29 100.0 32 ............................. ATTAAATTTTTCGGGTAAAGAGAAATTGCGAA 186479 29 100.0 32 ............................. CTGCGAGCTACCCTGAATTTCAGCGACAGGGG 186418 29 100.0 32 ............................. TAGTGCCATATATTATCCTCTGCGGTATGACT 186357 29 100.0 32 ............................. GAGACTATTATGCGAAAAACTATTACTCCCGA 186296 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 186235 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 186174 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 186113 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 186052 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 185991 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 185930 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTACAGGTAATACGT 185869 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 185808 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 185747 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 185686 29 100.0 32 ............................. GCAGTCATGCAGCAATCCTAACAACCTTTCGC 185625 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 185564 29 100.0 32 ............................. CAACCTACGGGGATCCGAAATCGCCTGCGGTG 185503 29 100.0 32 ............................. CGACAGGCCTCCGAAATTGTACGCAGCCTTGA 185442 29 100.0 32 ............................. CGATCAACGTACCGGAACTACTCTGCAGACCA 185381 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 185320 29 96.6 32 .G........................... TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 185259 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 185198 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 185137 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 185076 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 185015 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 184954 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 184893 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 184832 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 184771 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 184710 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 184649 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 184588 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 184527 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 184466 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 184405 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 184344 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 184283 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 184222 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 184161 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184100 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184039 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 183981 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 54 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //