Array 1 22064-23009 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTI010000016.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 702465 NCIMB702465-i1-1_scf16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 22064 36 97.2 30 ...................................G GCAGCCGGGAGTTTGCTGGAAATGATCAGG 22130 36 97.2 30 ...................................G CATCGCTGACATAGCGATAGTCGTACATCT 22196 36 97.2 30 ...................................G AGTCAAATACTGAAGGGTATCGATCAACCG 22262 36 97.2 30 ...................................G AATGTCCTCTGCGATAATGCGGTCGCTTTC 22328 36 100.0 30 .................................... TAAGGAAAAAGAATAATGACAGTTTTTGTT 22394 36 100.0 30 .................................... CTGAAACCTCTCATGGTCAAGTATTGTGCT 22460 36 100.0 30 .................................... ATTCCTGCTTTGGTCTTTGGCGGCTGGATC 22526 36 100.0 30 .................................... CGGGCGCTTGTGATGTCCCCGCCATGCCAA 22592 36 100.0 30 .................................... AGAAGATGCAGTAAGTCACAAGATCTACTC 22658 36 100.0 30 .................................... AATGGCGATCTCACACATCGCCTAGAAAGA 22724 36 97.2 30 A................................... TAGCTAGAGCGGATATCAAAAATACTTCTA 22790 36 94.4 148 ................C...T............... GTTGTGTAGGTTCAAATCCTGTACTCTCCTTGTTTTGGAATATTTCCATTCAATGTTGTCAATTTTCCCGACGTATGTTGAGGTGGCCATCATAATGACCTAATACTAAGACGACAATTCTACTCATTCCACGCAGGTGGGGGTGATT 22974 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 13 36 96.6 40 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTTTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACTGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATACGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTAAATTAAAGCTGTGTTAAAAAACAACG # Right flank : GTGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAAGAACTTAAAAAAACGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTACAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGTGGCGCGTTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATCGCCTTAAACACCGGGATGCGGCAAGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGTTCCAGCCTCAAGGCGGCCCGCCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGG # Questionable array : NO Score: 4.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:-0.90, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //