Array 1 1139-2118 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENP01000022.1 Clostridium botulinum C/D str. BKT12695 Contig23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================================================================================================================ ================== 1139 29 69.0 204 TGAA.....G..G.....T...AT..... AGAGTTAGATTACATAAATTTGCAGTATACAAAACAAACGTTCTTATATATTAAAAGCATTGATTTTCCTAAGGTTTAATAACATATTTTTTAAATTCAAAAAACACAACCGAAGGTTTACTGCAAAATTGGTGAAATTAGACTTTGAGCCATTTAGCTTAAACATAGTAATACCAGTGTATTTAAGTATATTTGATTTTAGGG 1372 29 100.0 39 ............................. AATCTTCTTGATTACCAATAAGCTTTTTTAAGAGTTTAA 1440 29 100.0 36 ............................. TACGATTTGGCACGTTTATTTAGTACCTAAGCATAA 1505 29 100.0 36 ............................. TTTTTATCTATAACTTTTTCTACTTTTCCAGAAGCT 1570 29 100.0 36 ............................. TTAAATTCACAATGTAATTACAATGTGAAAATAAAA 1635 29 100.0 36 ............................. CTGTCTTGTTTTTCCCCACAACCATTTGGCTACTAA 1700 29 100.0 37 ............................. TACGACAAGTTGGTGAGATATTAGACGAACCATCAAG 1766 29 100.0 35 ............................. CAAGTAAACAGATCTCAACTGAATAACAATTCTAG 1830 29 100.0 36 ............................. TTTGAATTTATTCGTCAAATCAGACAACATAGGCAC 1895 29 100.0 37 ............................. CCAAAATGGTTTTTCTAAAGCGGTTGATAATTTCTTT 1961 29 100.0 36 ............................. TGACATATTCCATGATGAGATTGGTTTATATTTCGC 2026 29 100.0 36 ............................. TATCTTATAATTGTTTTTCTCTTTTCTCTAATACAA 2091 28 79.3 0 ...............A.CAC..-...T.. | ========== ====== ====== ====== ============================= ============================================================================================================================================================================================================ ================== 13 29 96.0 50 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : ATATCTAGCTATTACTCCAAGAGATAATGCAATGAAAGTAATTGGATTAGATAATTTATTTTGTGGAGGAGAAAAATCTGGACTATTTGTAGGACATACGGAAGCAATATCTACAGGATCTCTGGCAGGAGCTAATGCTGTAAGACACGCAGCAGGTAAAAACATGATTGTGCTTCCAAATGAAACAGTAATCGGAGATATTATTGATTTTGCAAATAAGAAATTTTTAAAAGATAAAGACAAAAAAAGTAGATTTACATTTGCGGGATCAATATACTTTAATAGAATGAAAGAAATAGGACTATATAGTATAGATAGCAAACAAATAGAAGACAGAATAACAAAACTTGGTCTAAAAGGAATATTTAATGAAAAAATTATTTAAATAATATAGGCACCCTAAAATAAAGTGCTCCTTGACAAGTATACAGTGGAGCACTTCAAAAGGTGTCTTTTATTTTTTATAAAATTTCTTCTAAATAAATAACTATCAATTACTA # Right flank : TTTCATTTAGTTTTTTTACTAATATCGTATAAAAGTTTTAATGGGTTGTCACATTAAAAAGTCTAGTGTGACAACCCATTTTAATAAATCTGTTTAACTTTATATTCTATCCAATAATGCTGCTCCAATGATTCCAGCATCATTTCCTAACTTAGCTTTTTCTATTTTGCAAAGTTCTAGACCCTTAAATAGCTTATGTTCTTTTATATATTTTATTAGTCTATCCATGAATAAGTCGGAACCTGCAACTACTCCACCACCTATTGAGATAACATCTAAGTCTAATACATTTATTATATTATTTATTCCAGTTCCTAGGTATTCTATAAATCTATCTAGTGTAAGATTTCCAACCTTGTCCCCTTCTCTTGCAGAGTCAAACACAATTTTTGCATCAACTTTGCTTAAGTCTCCTTTAACTTTATCAGTTATTATGCTTTTTTCTCCATCTTTTATTAATTCTTGAGCATATTTTATAATTGCAGTAGCAGATGCAAATG # Questionable array : NO Score: 4.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-1.41, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [9-9] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 5746-7678 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENP01000024.1 Clostridium botulinum C/D str. BKT12695 Contig25, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5746 30 100.0 36 .............................. ACTGAAAAACAATCTATATTAGATTTATTTAGAAAA 5812 30 100.0 34 .............................. GAAACAATCCTAAAACAGTTTTATTGCATCACGC 5876 30 100.0 36 .............................. ATTAAATTACTATTCTTTTTTGTTTTAATTTTATTT 5942 30 100.0 35 .............................. CTTTTCGATACACTTTTTTAGAGATTAAATCAAAA 6007 30 100.0 34 .............................. CTAAGTGTTTTTGGTTTTTCTTTACTATATTTAA 6071 30 100.0 34 .............................. ACTGATTTTATCTGTAATTAATTTTGTACTTGCA 6135 30 100.0 35 .............................. ATTTTACTATCCTTAGTTCCAACAACTTCAAATGT 6200 30 100.0 35 .............................. TCATTTACTATATCTTTTTCCATTAACCAAGCTGA 6265 30 100.0 36 .............................. AAAGTCCTAAAGTTGGAAAGCGTCTAAGAAATTCTC 6331 30 100.0 36 .............................. AGAATCATGTAAGAAAATTTCTATTTAGTGCTATTA 6397 30 100.0 35 .............................. GCACAAGCACCTGTAGTAAACGAGGTGGAGAAATG 6462 30 100.0 35 .............................. AGTTCTAAAGAGGTAGAAGGTTATGCGGGAGGTAA 6527 30 100.0 35 .............................. ACTATATCTACTATATTGTAATCTCCTTGTATTTC 6592 30 100.0 36 .............................. GCACATTTTGTGCAGCACTGTCATTTACTGAATTTA 6658 30 100.0 37 .............................. CGAAATTATGTGTGTTGAAAAGGTTGAAAATAATGAG 6725 30 100.0 34 .............................. TTTATTATGCCAAAATGAAAGGAATGATTATTAA 6789 30 100.0 36 .............................. TCATTGTGGAAACACTTCAAAAATTTTTATATCTCC 6855 30 100.0 36 .............................. TATATTCTTAGTTTCTGATTTATTAAATTCCCATAC 6921 30 100.0 37 .............................. GTCAACGAATTAGAAAAGGGGTAATTAATAATGGGAA 6988 30 100.0 39 .............................. TCTTCTAAGTCCTCCACCATTTTGAATGGCAACTTCTGC 7057 30 100.0 37 .............................. GGACAAAAGAACGTAATTAATCCTCTAGTTTTTAGGA 7124 30 100.0 36 .............................. TATAGGAGTTCCCGTTGATTTTGAAGTTTATAAAGG 7190 30 100.0 36 .............................. ATTTATGGGTATTTCAACAACAAGAAGAGTTAATAC 7256 30 100.0 35 .............................. TTTCCTGTAATTCAAGGGAAAGATATTTTATTAAG 7321 30 100.0 36 .............................. TGGTATTAACCCTACTTTAAAAGAACATTTAGAAGA 7387 30 100.0 35 .............................. GCTGAAGAATGGGCAGATTTAACTATAGAGAAAAA 7452 30 100.0 36 .............................. TTAATTAACATCATTTCCTTTCATATTAAATATTTG 7518 30 100.0 34 .............................. CAAGTAGAATAAGATATTGGAGTGATAGCTTCGA 7582 30 100.0 37 .............................. AATGTGTTAATTACATATAATAAAAATAGGAAAAAGG 7649 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 30 30 100.0 36 ATTTAAATACATCTTATGTTATTGTTCAAC # Left flank : ATTAATTTTTTCTATTAAAAGTTTCATCTTAATTTCTCCTCATTCTGTTAAATTATATGAACATCAAATTACCCATCATTAGGATTTTATTAATGCTATTTCTCTTTTGTTTTTTAGTTAGACTATTATTTATTTTTATTTAAAGATATATTTACTATGGACAATACACTCATTATAGCTAGTAATAGTAATCTAAGCCAATCCATAGATGACCAAAACTGACCTCCATTCACAATATTAGGAGTTAAGTTATACTCATCTACAAATATTCCCATATTCCAAAATAATTTAATAGAAATAAGTAATGAGGCTATACTTATTATAAATAAAAAAATAGCTATTATCTTTTTCATTTTATCTCCTTTCTATTGATAATGATTTTATAAATAATTATATAATAAAAAATTTGATTTGTGCAATTTACTATGCATTTTATATCATTTAAATACATGTTATTGTTTAACCGGACTAAAAGCTAAAAATATACCTGTCTATAGAAC # Right flank : CCATAGTAAAATAGCCATTTCTTATTTTTATTATACCCCTAAACCCATTGAAAATAAAGGATTTCATAAGTTTTTTCCCAACCAATTTTGATAATTTAAATTTTTTGCAACAAACCCTTAACAAACCTTGTAAAATCAATAGATTCAGGTATATTACTTCTATGAATCGATTGGGAAAACAATAGCCTTATTTATTATTATTTAGTAGTAACTCAATCAATAGTATTATGAAAATATTTTTGAAGTATTTTTTGGTCTCCATATTTTTTTATTTACCCATTGTATTCCACTTAAATATTTTTGACATATTAAACCTTATTAATTTTGAACTATTAATTATTATGTCCTTTATTTATTGATTATTAAATATAACTTTATTATTGATTTACAAACTTGGTATCAAAAAAACAAAACCACCAGGCATTAACCTGGTGGTTTTCACATACGAGATAAGTCTATAAGCCGAGTTCTGTATTTGATGATCATCTATCTAGGCCTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTATTGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 29954-29530 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENP01000026.1 Clostridium botulinum C/D str. BKT12695 Contig27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 29953 30 100.0 35 .............................. GCATTAGGTATATGATAAGTATGCTTTGCATTTCT 29888 30 100.0 34 .............................. AAGATATTGATAGTAAGAAGTCCGATGAGTGTAA 29824 30 100.0 36 .............................. TAGATATAAGTAAGAAAGACACCAGTTTTTATTTTA 29758 30 96.7 37 ...............A.............. TCCAAAATACTCCAGGATAAAGGATTTAGAGAAATAA 29691 30 100.0 36 .............................. ATAAAAATTTAAATGAATCAGAAAAAGAGGCTGTGC 29625 30 100.0 36 .............................. CATAGACAAGATGTTTCCTGTACGTTACCCTGTCCA 29559 30 96.7 0 ...............A.............. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 99.1 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : TATAGATAATGAACCCTGGACTGATAAAATGGATATTGAATTAATAAAAAGAAATATAAATAAAAATTTAATAAAAAAAATAAAAGCAATCCAAGGTATAGACGAGTTTTTAGAACATGACATGATAAAAAATATAAAATTAAAAAACAGAATGCCTATAGGATGTAAATATAAGCGTATTAAATTGCTAGGAAATAAATTTGAAATACAAATTAAAGAACATCCTATATCACAACTAATGGCAAATGTAGCTTTAGCAGTAGGTATATTAGAAAAAAATTCTCTTGGATATGGCTATTGTTTGTATAAGGATAATTAATTATTTTCCCAACCGATTCATAAAATAAAATTCATTAAACCTCTTGATTTTAAAGGGTTTGATAAGGTTTTTCTATGAAAAAATTAAATAATCAAAATCGGTTGGGAAAAAATCAAGGAAATTGTTTATTTTCAATGCTTCTAAGGGTATAATAAAAATAAGAAATGGCTATTTTACTATG # Right flank : AGACGTGTAAGTATTGAATTTACTAGGTTTAAAGAAATTCGTCAAAAATATCGTCAAAAATAATTTTCAAAAAATATTTTTGATTACTTGATGGGCTTTATTTAACATATCGTTATTAACGTGGCTATAGGTTTTTAAAGTTTGCTCTACAGAGTGTCCTAAAATTTGTGCAGCAGTTTTAAAATCTACTCCATTTGCAATTAACTTAGTAGCGTAAGTGTGTCGCAATTCGTGGATAGTTATACCGAAGCCACGTTTTTTTAATTTTGAATTTACAATAGAACAAATAGAGTTTGTAGCTTTGAAATTAAGAATTCTATTATTAATATTTATAATATTTTTATGGTTAATTAATTCTTTAATAACTGCATTTGAAACTGGAATAATTCTATTAGAGTTTTTACTTTTAACATCTCCAAATCCCCAAGTACTTTCTTTTACTTTTTTCCATTGCTTATTTACAGTTATAGTATTATTTTTAAAATCTACATTATCCCAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 3714-3156 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENP01000053.1 Clostridium botulinum C/D str. BKT12695 Contig54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3713 29 100.0 38 ............................. AAAAGAATTAGAGGAACAACTCAACGAAGTTTTATTTA 3646 29 100.0 36 ............................. TTAAAAAATTACCACGAAGAATTAAATAAAATGTTT 3581 29 100.0 38 ............................. ACATATTACACTCTTAATCTATCTTATCTACTATTTTA 3514 29 100.0 36 ............................. TAACAATAATAACTTCGTGCATAGGAAATAAACTAT 3449 29 100.0 38 ............................. GGTAAAGAATATTTAGAAACTCGTTTTAGTTTAGATCA 3382 29 100.0 37 ............................. GACTAAGATTTACAGTGTCCCTGCTGTGTTATCTGCT 3316 29 96.6 37 ...............A............. GCAAGGAAGAATATGATCATTGCTCAAAAATACTTAG 3250 29 96.6 37 ...............A............. AGTTTTACATTGTGAGTTGGAATAATTGAAATTAGAT 3184 29 96.6 0 ...............A............. | ========== ====== ====== ====== ============================= ====================================== ================== 9 29 98.9 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : AACATTTTATAGGAGATGAAAAATACAAACCTTTAAAAGCGTGGTGGTAATTATGTTTGTTATATTAACTTATGACATTGAAGAAAAAAGAATAAATAGGGTAAGAAAAACATTAAAGAAGTATTTAACTTGGACACAAAACTCAGTATTTGAAGGAGAAATAACAGAAGGAAAATTGCATAAGTGCTTATCAGAGATAAATAAGAATATTGACAAAAAAACCGATTCAATATACATTTATAGAGTAAAGATGAGTAAAAATATAACCAAAGATGTAATAGGAATAGAAAAAAGTTTTGATGAACTATTCTTATAATTTGCAGTATATCAAACAAAAGTTCTTACAGTCTCAAAGTATTGATATATCTAAGGTTTAATGGAGTTTTTTTATAATTCAAAAAACACTACTTAAGGTTTACTGCAAAATTGATAAAATTAGAGTTTAAGGCGTTTAGCTTAAACGCAGTAATACCAATGTGTTTAGGTGTTTTCAATTTTAG # Right flank : AAAGATATTTATTATAAATGCGTACAATTTCAATTGTAAAAGGCACCTTTCAGTATTTTGTATTCATAATTAAACCAATAAAGTTATATATTATAAACTATAATTAATGGTTAAATAATAGATCTCAAAATAATATATAATATAATGAAATAAATTATACATTAGGAGCTGAATGAATGGAAATTGAAATAAAAAGCATACTAAAGAAAATTATTGTTAAAGATGATAAAGTTAAAGTAGAAAGACTTGAAATTGCAAATGATGAAATAACTGAAATTAGATATCAGATGGCAACTGTATGAATACAAGGTTTTATAACATTTTGTACCGAAAAAGGTGGTCAAAAGGTACATAGTTTAAATGATGCTACATTAAATAAAAATAGCACCACATTTTACTATGGTAATAATGAAAAGGTTGAAGAAATTCTAAATCACTTTTCTGAGAAGGTGAAATTAACGGAATTTACCGACATCAAAAAATAAAAGAAGTCAAAAACT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : GTTTTATATTAACTAAGTGATATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1399-2282 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENP01000064.1 Clostridium botulinum C/D str. BKT12695 Contig65, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1399 30 100.0 36 .............................. TCTGAATTAACCCCTTTTATCCAATCTACAAACTCT 1465 30 100.0 35 .............................. GATTGAATCTTAAACTTATCTCCTTTTTGTAAAAG 1530 30 100.0 35 .............................. TATAAAAAGGCATGAAGCAATAGATGGTATTAACC 1595 30 100.0 36 .............................. TTTATAGATGCTTTAGCTTCTTTCATTATATTGTTT 1661 30 100.0 35 .............................. TTCGTTCTATTGTCCACAACAAATACTCCTTTCTT 1726 30 100.0 36 .............................. CATACACAGCAATAAAGGATAAAGCAGATTTTGAAG 1792 30 100.0 35 .............................. CCTTTTGCCGATATTAAACCAATCAAGCTTCCTAA 1857 30 100.0 36 .............................. ATTTTTAACAACCCTTTTCCCCTTTCCTTTAATTAA 1923 30 100.0 36 .............................. TTCTCAGTATCATACAAATAAGTATTTTCTAACCAC 1989 30 100.0 35 .............................. CGTTCATATTGAACAGTTTTTCTACACAACTCTTT 2054 30 100.0 36 .............................. TTTTGATACCCCTCCTTGTTTAATCTATATGACAAT 2120 30 100.0 36 .............................. GATCTCATGTCCCTAGAAACATATCTAACTTGTCTT 2186 30 100.0 37 .............................. TCGTTTACATATACTACACCATTACTATAAAATACTT 2253 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : TATGTGGGAAATAAGAGAGATAAAGCCTAAAATAAAATCAAAAGAACTTATAAAATCAGGAATGAATATTGGAAAAGACATTATGGGTTCAATGTCAAATACATTAATACTTGCCTATGCTGGAGGAGCAATTTATATTATGCTTTTATTTTCAATGTTCAAAATGGATCCACTTGAAATAATAAATTTAGAACCAATTGCTTCAGAAATAATAAGGGCAATGGCAGGTAGCATAGGTCTTATATGTGCAATTCCATTAACTGTTGTAATCGCATCTAGTTTAGCAAAAAAAGATAGATGATTAGAATAAAATGAGCTATTACTTTTCCAACCGATTTAAAAAATAAAATCACTTATACCTCTTGAATTTAAAAGGTTTGTTAAGGGCTTTTTATGAAAAAACTAAATAATCAAAATCGGTTGGGAAAAAATAAGCTAAAGTGTTTATTTTCAATGCTTTTAAGGGTATAATGAAAATAAGAAATGGCTATTTTACTATG # Right flank : TTTTAGAAATTCGTGTATAATAGTAATTGGATATTATGTATATTTAAATTTAATTTAATCAAAGTATTTTATAGATGAAGTTATTAAGGGAGTGATTATATGCCAGAAATAAGTTTATTTTTTGGAATAAGAGTTACTATAAATTATAATGATCATGTACCACCACATTTTCATGCTGAATATAATGGAAATAAAGTTTTAGTGGATATTATAAATTGCAAGGTAATAAAAGGATATTTTCCTAAAAGACAATTAAAATTAATTCTTGCATGGGCTGAAATACATAAAGATGAGTTAATGCAAAATTGGGAACTTGCAAGAAGTCATCAACCATTATATAGAATTGCACCACTTTCTTAGGAGGGATAAGCATGGAATATATGCCAGAAGTTATACAAGTTATTCCTACAGATAACTTTAAGGTTTATGTGTATTTTGATGATGGTTCTATTCATTTATATGATGCAAGTGATTTAATAAAAAATGGAATTTTCAAAGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [75.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //