Array 1 178237-180777 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNWI01000008.1 Sunxiuqinia elliptica strain 114D Ga0227278_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 178237 36 100.0 30 .................................... CCCTAATTTGAACCTGAGGGTAACATCCCC 178303 36 100.0 30 .................................... TGGTAAAGGTCGTATAATCGAGACATATAA 178369 36 100.0 30 .................................... TCAACTGGCTACACGGTTAAAGGGTTGACT 178435 36 100.0 30 .................................... AGCGTAGCCAAAGATATGCGAGATGACTTG 178501 36 100.0 30 .................................... ATAATAGCAAAAATCATTGACCAGCTCACG 178567 36 100.0 30 .................................... TGCCTTCAAATTATTAAAACACTGAACATA 178633 36 100.0 31 .................................... CCCAAAGCGGTTTGTTATAAACCGGCCCGTA 178700 36 100.0 30 .................................... CTCCCTCGACAGGGGGAATGCCAACGCCAG 178766 36 100.0 30 .................................... TGAAATTGTACACATCAATTATGACTTTTG 178832 36 97.2 29 .....A.............................. CAACAGTTGAAGAGCCAAAACAAGAGATG 178897 36 100.0 30 .................................... AAGCTTGAGCATTTAGTTCAATCGGCTTAG 178963 36 100.0 30 .................................... ATCCAGGAGATCAAACATATCTTCTGGCAT 179029 36 100.0 30 .................................... AGAGGCGTTCTGCTTCTCCATCAGGTTGTA 179095 36 100.0 30 .................................... CAGTATGTCATTCAATAAAACACAGGTTGA 179161 36 100.0 30 .................................... CTTGCTGACCGGATCCCAGGCATGTGCATT 179227 36 100.0 30 .................................... GTAGGCAAATTGGTTGACGAAGAAATTGAC 179293 36 100.0 30 .................................... GACGAGGCAAGAAAGGACAACTAGATCCGC 179359 36 100.0 29 .................................... ACCCGATTAATCGTAAAAACCTCTCCACG 179424 36 100.0 30 .................................... TTTAAGGCAGTTGGCCACATAACCAACGAC 179490 36 100.0 30 .................................... CGGCATCCAATGGCGAAGCTTACGAGCTAA 179556 36 100.0 30 .................................... GTATTCCAGCACATTCCACGAGAGGTAACT 179622 36 100.0 30 .................................... ATGAACTCATTACGTTGAACTAACTACTTT 179688 36 100.0 30 .................................... CGTTAACAAAGTGTTTATGCCATGCCAGTA 179754 36 100.0 30 .................................... TTTCTCACGCCTGATGAAGCATAGCGATCT 179820 36 100.0 30 .................................... CAGTATTAGGCGTATTGGTCACCTTGTTTT 179886 36 100.0 30 .................................... TTGCCCTTGCAGACACAGGGCGTTTCCGCC 179952 36 91.7 30 .....................G....CG........ CGCGACCAGGTTGAATTGGATTTCTTCGCA 180018 36 91.7 28 .....................G....CG........ AGAGAGGTGGAATCAAACCACCGACCGG 180082 36 91.7 30 .....................G....CG........ TTATTCAACTTCGCCAAATTGGAGCTCACA 180148 36 91.7 30 .....................G....CG........ AGCAGGAGAAAGCACAGAAAGCACAAGCAG 180214 36 91.7 30 .....................G....CG........ TGGATGTTGAGAAATGTGAGGCCAACAATT 180280 36 91.7 30 .....................G....CG........ TTATTCAACTTCGCCAAATTGGAGCTCACA 180346 36 91.7 30 .....................G....CG........ AGCAGGAGAAAGCACAGAAAGCACAAGCAG 180412 36 91.7 30 .....................G....CG........ TAGTGCTCCTGACTTTGTCGATGGGAACCT 180478 36 91.7 30 .....................G....CG........ CAATGCATGAATTACAATGATAATTGGATT 180544 36 91.7 30 .....................G....CG........ GTATTAAAAAACTGACATTCAGCACGTAGA 180610 36 88.9 30 ......A..............G....CG........ GTAGAGCGTAAACAAACGTGACGCACGGGA 180676 36 86.1 30 .....................G...TCG.A...... AGCAGGGCTTTTTGTGTATTGGTGCAATAG 180742 36 97.2 0 .....................G.............. | ========== ====== ====== ====== ==================================== =============================== ================== 39 36 97.1 30 GTTGTGGTTTGATGTAAAACAACTAAGACTTACAAC # Left flank : TCGACCTGCCCGTGACCTCTAAAAAGGAACGCCGGCAAGCCACCCGATTTCGGAAAGACCTGATGAAAGACGGCTTTTCGATGATGCAATTCTCGGTCTACATCCGCCATTGTGCCAGTCGCGAAAGTGCCGAGGTACACCTCAAGCGCGTGAAGGATTTTGTGCCCGAAAAAGGACAGGTCAGCATCCTGGCTGTTACCGACAAACAATACGGGAGCATCGCCAACTATTGGGGCAAGAAAGATGATCCTTTGCCTGAAGGCCCCAAACAACTGGAAATGTTTTAAGCGCCCTTTTCGAAAGGCTGAAGCTTTGGGAAAACAATAAAAGAGCGTAACTTCCCCAATCCGTTCATTGACATATTGGCTTTTTCGTGTTAGTTTTGAACCGATAGGATTAAAAAAACCGTGCATCCAACCACTTCTTTGGTGTAAACCAGGCATTTTTCTTCTTGAAAAATCGCCGTAAACCCCCATCAACAAAGGGGATAAAAGCCCAAG # Right flank : CAGGGATATTTTGCAGTCAATACTTTCGGATAAATCTGAGGTCAACACCTCGCGGGCGATGGGGACAGCAGAGGCTGGACAACAGCGAAAGTATTTGATCAACCCGCAAAAGACCGGTCAAGCATTAGTACGATCGATTAATGGCTCACCGGTCCTTGATGGTGTTGCGCCCCGTTGCATTCAAACTGCAGGGTAATGTGTTCAATGCCGAATTCATCTTTCAGGATATGTGTCAACGCCTGATTGATGGCTTCGGTTTCCGACAGTTTCAGGTCGTGCTGAATAACCACATGCCCTTCAAAGTGAATGGTTTTATCGGTTAGCCGCCAAATATGGATATGATACACCCGCTCCACAGCCTCCTGCCGGGTCAGCCGGGCAGCAATCTCCGCAGGCACAAGATGGTCGGGAGCAAACTGCATCAAAATTTCGGTTGATTCTTTCAGCAGCTTATAGGTATGAAACAGCAGGTACAGGCTAATCAACAAGGTTACCGTTGG # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAAAACAACTAAGACTTACAAC # Alternate repeat : GTTGTGGTTTGATGTAAAACAGCTAACGCTTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //