Array 1 45147-47082 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJJO010000007.1 Ligilactobacillus salivarius strain An813 An813_NODE_7_length_106238_cov_24.180851_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45147 36 100.0 30 .................................... AGCAAGTGTGTCCAAAAACGGAATCTCTTT 45213 36 100.0 30 .................................... TAAATTAGTTCCTTATGAAGCTGAATATGT 45279 36 100.0 30 .................................... AGGATTAAATCCATGGTTGGTAGTAATCGC 45345 36 100.0 30 .................................... CAAAAGCAAACCCATAAACCCAAAGAAAGA 45411 36 100.0 30 .................................... CAATCAAACTGAATTTGATTTTATAAATTT 45477 36 100.0 30 .................................... GGCTACCTTAAGATAAATTTCACCTTCAAG 45543 36 100.0 30 .................................... TTTCAGAAGCCAATTAAAACAACCTGCAAA 45609 36 100.0 30 .................................... CTGGGTTTCAACCGGCGTGACTAAGAGTAC 45675 36 100.0 30 .................................... TACTCGTGTGGTAAGCTGACAAACTCGATA 45741 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 45807 36 100.0 30 .................................... AGATGTTTTAACGTTTATCAACTACAACAG 45873 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 45939 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 46005 36 100.0 30 .................................... AGCACGTTTGAACAAGTACGCTAAGCAACG 46071 36 100.0 30 .................................... GTATGCAAATCTATAATGCTGCTTATTATA 46137 36 100.0 30 .................................... CCTACTTCTTTTTTATTAATCGCATTATTG 46203 36 100.0 30 .................................... TTAACCATCGCTAACATTGGTCGAGCTACT 46269 36 100.0 30 .................................... AAACTGTTTTATTAACGCATTAATGAAGAA 46335 36 100.0 30 .................................... GAAATAAAAAAGCCCAGAGCATAAAGCCCT 46401 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 46467 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 46533 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 46599 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 46665 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 46731 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 46797 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [46830] 46863 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 46981 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 47047 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 29 36 98.1 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //