Array 1 3004-135 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXKG01000043.1 Streptobacillus moniliformis strain IKC5 contig_76, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3003 36 100.0 30 .................................... GACGATCAAGGAAATAGTAGAAGGTTAAAA 2937 36 100.0 30 .................................... TATATTTATTAAACCAATACCCTTTAATCC 2871 36 100.0 30 .................................... AACAAGACTTAGAGAAGACAACGCAGTTCA 2805 36 100.0 30 .................................... AAACCGAAACGGTTCACGAAAGAAACCGAG 2739 36 100.0 30 .................................... AATTTTGACTATTTCAACAGTTCGAGAATA 2673 36 100.0 30 .................................... TTCTTATTTGTTCATTAAAGATCAAGTTGT 2607 36 100.0 30 .................................... TTTTTTACCTTCTTTGTCAACCAAAACATT 2541 36 100.0 30 .................................... TTTAGTTTTAGTTCCAGGTAATCTAAAACC 2475 36 100.0 30 .................................... CCTAATAAATTAATAAGGTATGATAAAGAT 2409 36 100.0 30 .................................... ATAAGGATGCTCGTTAATCCCTTTATTATA 2343 36 100.0 30 .................................... TATTTTTTTGTTGTGTAAATCCTAAACCTC 2277 36 100.0 30 .................................... CAGGATGTTTACCTGTGTTTGGGTCTATCC 2211 36 100.0 30 .................................... AAGATTTTTTAAAAAGATTAAGAAGAAGGA 2145 36 100.0 30 .................................... ATTATTTTACCAAACTCAAGAGATATGAAT 2079 36 100.0 29 .................................... TTTATTTTTAAGTCATAATATCAATAGAA 2014 36 100.0 30 .................................... AAAAAATTTATAAAGAATTTAAAGAAATTG 1948 36 100.0 30 .................................... ATTTGGTTGGAGAGGAATATATGACGAGTA 1882 36 100.0 30 .................................... TTAAAAGAGAGTACAACTATTACAAAGTAA 1816 36 100.0 30 .................................... TATTGAAATAATCAAAGTTATATAAACCTC 1750 36 100.0 30 .................................... ATACTTATTTTTTGACCTGGGATTATTTCT 1684 36 100.0 29 .................................... GATATGAGATTTTAAATAACCTTAGAAAG 1619 36 100.0 30 .................................... TATCCAGCATACCAACATAGCCCCTCGTTG 1553 36 100.0 29 .................................... GATTAAAAACTCTTTCTTTTCAGCTACAT 1488 36 100.0 30 .................................... AAGTAGGATTATCGATAAACAAAGAAACGG 1422 36 100.0 30 .................................... AAAAATGGAGGGAAAAACGGTAAAAATAAA 1356 36 100.0 30 .................................... TAACTGAAGTAAAAGAAACGGCTTACTTTT 1290 36 100.0 30 .................................... TTTAGACTTTGTATAAATTCATAGCTAATT 1224 36 100.0 30 .................................... GTGTTAATGAATTATTAAATATCGCAAAGA 1158 36 100.0 30 .................................... GGTAATGCTGTCTTTATGTGATTTTCAGCA 1092 36 100.0 30 .................................... TTGTAAATGTTAAAATTTTTAAACATCTTT 1026 36 100.0 30 .................................... AAAGATGGATTGGCAAGTTATACGTTAGCA 960 36 100.0 30 .................................... GGACATCTAATAAATTGGCTAGTTCTGGTG 894 36 100.0 30 .................................... AATAATATATTTTATTATATATTCAAGTAT 828 36 100.0 30 .................................... GGCTCCGACAGAAAAAAACGGAATGGGTGT 762 36 100.0 30 .................................... ATAATCATTTTTACAGTTAAGAAATCACTA 696 36 100.0 30 .................................... TCGATAATAACAAATATTTTAAACAATAGA 630 36 100.0 30 .................................... TAAGTGGTGCTTCAATGTTAGTTGGAGAAC 564 36 100.0 29 .................................... TAATACAGCAATAAAAAATCCAAACTTGA 499 36 100.0 30 .................................... AAGTAGATGTTAAAGATGGAGTTACCGAAA 433 36 100.0 30 .................................... TTTTTTTTGGAATAAATCACGATGAATTTT 367 36 100.0 30 .................................... ATAATCATTTTTACAGTTAAGAAATCACTA 301 36 100.0 30 .................................... AATCTATATTTTGATTAATTAAATCAAAAT 235 36 100.0 29 .................................... TTTTTAAAAAAAAAAGCTTAAAAATCTGA 170 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 44 36 99.5 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : GTTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTCTATAGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //