Array 1 43205-40040 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAABON010000010.1 Weizmannia coagulans strain CICC 20138 contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================================================================================== ================== 43204 32 100.0 34 ................................ CAAAGTGGCCTGACACAAAAAATTATCCGTCCTG 43138 32 100.0 33 ................................ GCAAAAGGGCAGCTTAAGATATTAATAGCTTCC 43073 32 100.0 34 ................................ ACCATTTAGGCAGGCAGATAGGGCATATTCTTTT 43007 32 100.0 34 ................................ CATAGTGCCAAGGCTGTTATGGAATATACCGAGC 42941 32 100.0 33 ................................ ACTCCAGTTGGCTTGCAAATCGCGGAGAGTTTG 42876 32 100.0 33 ................................ GGTTACCGCTACAAGTCCCAATATTTGGTGTGT 42811 32 100.0 33 ................................ CCGTGATTTGCTGCTGCTGCCGATGCAAATAAT 42746 32 100.0 34 ................................ AAACATGGAAGTAACAAATTCTTCATATTTTTCA 42680 32 100.0 35 ................................ CAGTCGACCTGCACATATTCTTCCAGGCATTCCAG 42613 32 100.0 34 ................................ TTGCCCGGCGAGCTCATGCCGTCGAACCAATTCG 42547 32 100.0 34 ................................ GTTTATCCGATCGAGCAGACGGAAAATTTTTTGC 42481 32 100.0 34 ................................ ATAAAAGTTACGTATGGTATCGTCAATCTACATC 42415 32 100.0 34 ................................ GCACCACATCTCCGATACATTTCAAATTAGAAAC 42349 32 100.0 33 ................................ CCAGGTAAAGCCGAGCATTTCACCGAGACCGAC 42284 32 100.0 35 ................................ TCCTTCTCACATTGCACCGGATCCCGATACATGCA 42217 32 100.0 34 ................................ TATGCTGTCTATGGTATAATAAATTTGTAAGGGA 42151 32 100.0 33 ................................ TAATATTTTCTGAAAAGTTTACATTGCATAATT 42086 32 100.0 35 ................................ GGTGCCCAAAACTTATTCACGATATCAATTCCGCC 42019 32 100.0 33 ................................ GACGTTTACAAGCGCATAGCAGCGTGGATCAAC 41954 32 100.0 36 ................................ GTGGCTTATTGGACGATGTATCGTTGCTATACTAAC 41886 32 100.0 33 ................................ GACATTAAACCGCGATGGCTTTGCATACGCGAG 41821 32 100.0 33 ................................ GACATTAAACCGCGATGGCTTTGCATACGCGAG 41756 32 100.0 34 ................................ CGAACGATGGCGAAGCCTATGCCGTCGGTAAGGC 41690 32 96.9 34 ...................T............ CAGAAAAATTTTACCATCGTTAAAATTGTGATAT 41624 32 100.0 34 ................................ GGAAATGCTTACCCTTTCTTGACCCTTGCCGGCA 41558 32 100.0 34 ................................ ACATTGGTGTGTATTGGTGCGGAATCCGGTGCAA 41492 32 100.0 34 ................................ ACCAGTTTTGAAAACGCCGCTTTATGGCTCAATA 41426 32 100.0 34 ................................ AACCGATAGGCAACTTGGCAAACATTGTAAAAAA 41360 32 100.0 33 ................................ ATCTCTCATTTGGTCAATGACGATGTCCGGCGC 41295 32 100.0 34 ................................ CGTTTTATATTGTAACTCTTTCATATAACTTTAT 41229 32 100.0 33 ................................ ACCTGCCTATGCATCACTACAAGAGGAACGAGG 41164 32 100.0 39 ................................ TTTTCCAGCGCTGCTATTCGTGTTTCGTGATTCTCAATC 41093 32 100.0 34 ................................ AGCGTGGACAACGAATATAGCATGAAACGGTTCA 41027 32 100.0 36 ................................ ACCGGCTGCGGCGCCTGCGTTGTAAGTCGCTTCCAT 40959 32 100.0 33 ................................ TCTCACCGGTTTTAGGGTTTATAATTGAGTCGC 40894 32 100.0 34 ................................ CCCTTTCGTTTTTTATTGCTTTTTCGTATAATCT 40828 32 100.0 34 ................................ TTTAAAATCATCATCGCTAAAGTACATATTAACT 40762 32 100.0 34 ................................ TCCTGTTTCCCGCTTACTCTGTTTCCCGCTTGCC 40696 32 100.0 33 ................................ TTATAATGATAGTTATAAGTATCGGTAATTAGC 40631 32 100.0 34 ................................ GACAGCAGCGATCAAAAATTGCTAACGGTGGAAG 40565 32 100.0 34 ................................ TGCGACATTTCGTGCTGATGCCTACAGGATTTCA 40499 32 100.0 34 ................................ GTAAAAAGCTGCTTAGAAGCCCGGAAATAATTTT 40433 32 100.0 33 ................................ CTCAATTTCCACATCTGCAAAAGTTTCATCAAG 40368 32 100.0 34 ................................ AATTTTATATTGGATGTAGCCTAAAAACGCGTCT 40302 32 96.9 34 ..............................G. CGGAAAAACAGGAAAAAGAAATTGTTGAATGGAC 40236 32 87.5 132 ...........TA........A....G..... CAGGAAGTCATGTAAACTATTTTTTGCTTATTGTCGATTCCTATACGAGGGTATGAATTGCGCAAAAGTCGCTCTCTAAACGGGGAACGGCAAAAACGGAGTCGCCCCTTTGTGATGTGGAAATATACAAAA 40072 32 68.8 0 ..........GTAC.....T...AT.AT...A | T [40054] ========== ====== ====== ====== ================================ ==================================================================================================================================== ================== 47 32 98.9 36 GTCGCTCCCTACGTGGGGGCGTGGATTGAAAT # Left flank : TGAGTATCCTCCCTTTCTGTGGAAGTAGGTGGAAAAATTTGCTTGTTGTCATTACTTATGATGTAAGCACTTTGACCGGTGCAGGGCAGAAAAGGCTGAGAAAAGTGGCGAAAGTCTGTCAAAACTATGGCCAGCGTGTTCAGAATTCTGTTTTTGAATGCTTCGTTGATGCAACTCAATTTGCATCTTTGAAGATTGAACTGTCTAATATTATTGACCCGGACGAAGATAGCCTGAGATTTTATCAGTTGGGGAACAACTACAGAAATAAAGTAATGCATATCGGGGCAAAACCATCTTTGGATTTAGAGGACCCATTGATCTTTTAGAGTGCGAAGGTGTAGCGCACACGATTTTTCCTGTGGGTTCGCACCATAATATTAACCAATATTTTACATATATTGGTCTTGCTTGGTAAATAGTTCTTTGTTTTATCAGAGGAAATAGCGAAATTTGGTTGTTTTGAAAACACACATTCGCATTTTTTGCCAAATTCCGCT # Right flank : TTTAAAAAGCTATCCCCAGATTTAAGGTGGACTCCATCGTCAAGACACAAATTTAAAATTTTTAAGGTGGGTCAGAATCTGAAAAACAGATACTGACTAATAGAGCGTGAGGATGCTCATTGGAGGCAGTTAGTGGACAGTTCACATTTTTTGGAGTGATTCATCCTGCTTTATTTTTCCTTCTCCGGGGGTGTTGTGTCAAGGGCGAGTGTAGCGAGGGCTTTGCCGAACCCTTGACACAACACCCCCGGAGAAGTATCCTCTACCCGAAGGATGAATCACTCAAAGGCCATAAACGGAAGCAGGAGTCTTATAGCCCAGGGCCTGATGGAGTCTTTCGCGATTATAGAATTGTATAAAGTTACCAATCTCTTTCCTTGCTTCTCTAGGGGAGTTGTATTCTTTTAAATATACTTCCTCATACTTGATGGTTCTCCAAAGCCTTTCGGTAATGATGTTGTCAAGGGCTCTCTTTTTCCCATCCATGCTGATTTTAATCT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGTGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //