Array 1 2841872-2841367 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063310.1 Eggerthella guodeyinii strain HF-1101 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 2841871 33 100.0 34 ................................. TTCTACGGGTGAATTTAATCCCGCTCTTGGGTCG 2841804 33 100.0 33 ................................. ACGGTGAAGGGCCAGCTCGATCTCCCGTACTAC 2841738 33 100.0 33 ................................. ACGAGCCCGGTCAAGGCTTGCACGTACGACAGT 2841672 33 100.0 34 ................................. GAGTACGGCACGAACATCTACTGGGCGGCCCCGC 2841605 33 100.0 35 ................................. GAGCTTGGCGAGATATGGTCAAACGTGCCGCTCGA 2841537 33 87.9 35 ........T....T...G..T............ ATGTTGCGCACGAAGTAACGCATATCGTCGCGAAT 2841469 33 100.0 37 ................................. ACGCATGTGCCGAAGCCTGAGTTCTCGCGCTTGACTA 2841399 33 81.8 0 .....................A.A..CG..CC. | ========== ====== ====== ====== ================================= ===================================== ================== 8 33 96.2 35 GTCGCATCCCGCAAGGGATGCGGGGATTGAAAT # Left flank : CGAACATGCCGAAGCAGCCGTTCATCACGCCTTTGACCGTGTGGCTGCAGACCGACCTGTACTACGACCGCATCAAGGAGGCGTTCACGAGCGATGCCGCGCACGAGTTCTTCAACGTGGACTACCTCGTGCAGATGCTCGACGACCACAAGTCGGCCGACTTCTCCACGGTGGAGGGACGCGGCAAGCTCAAGATGATGCGCATCTGGAACATCTACTGCTTCCTGTGCTGGTACGAGGTGTTCTTCGGGAAGTCGAGCGAACAGCTGAAGCCGAAGACGAAGGTGGCGTAACGGCGCCGCTGCGACGCACGACGGCCGCCCTCGGGCGGCCGTTCTTTTGCGTGGCGAAGTGCGAGCATGGAGTGAGCATGGTGCATGAGGAAGGTTCGCACCGGAATCGGGGCGGGGAAGGAGTCGCCGCGGCTGATTTTGCGCGCATGTAATCCCTGCTTTCCAAGATGTTGTGCGACGACGACGGGCCGTGCCATAATTGTTGCA # Right flank : CGTTCCCGGGCGCCGGTTCGTGATGCGCGCGACGTGCGACCATCGCGGTTTGGGGCGCTGGATCCCCCAGTCTCCGCCCGCCACGGGGGTGGGCGGTTCCACCCCCCCCCGACAACGAGAAGTTGCTGCGGCGTCAATGCATGCATGACGGGGGCTGCGTGCGGGGCGTGGTACGCTAACAGCGTTGAAACACGTGTTGAACGAAGCATCACCTCGAGGGGCATCAAGCGAAGATGCCGGGCCTTGTGCGGCTCGGGCATCGCATACATTCGAGTGACCGGAGGGATCACGTGGATACGTCTACATCAACGAATCATGGGGAATCGAACAACGCGAACGGCGGCTTCTCGCGCAGGGCGTTCGTCAAGGGCGGCCTGGCCGCCAGCGTCGCCGCGCTGGGCGGGATGGCGCTGACGGGATGCGCCGCCGCGCCGGCATCGTCCAAGAAGGCGCAGGCGGCCGATGCCGCAGCGCCTGCCGACGAGGTGACCGCGCGCCTC # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCAAGGGATGCGGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3007149-3006791 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063310.1 Eggerthella guodeyinii strain HF-1101 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 3007148 36 100.0 29 .................................... TCGTCATTATTCTACCCACTTAATCATGC 3007083 36 100.0 28 .................................... CAGACCAATAGCAAGAGCAACTAACTCG 3007019 36 100.0 28 .................................... CAAAAATCGTGATCAACGACGTAGACGG 3006955 36 97.2 29 .........................C.......... AAGGAGCTGTCTTCCTTCCTGAAATCGTC 3006890 36 100.0 28 .................................... ACGAACTCACTACCTGCGAGCGTCATGC 3006826 36 83.3 0 .......T..G....A..C...G............T | ========== ====== ====== ====== ==================================== ============================= ================== 6 36 96.8 29 GTTGGGAACCACTCATTTTCCCATCTGATACACTAC # Left flank : GCCCAGCAGTATGGCAAGTATGTTGAAGGAGAAATTGAGCATTTGGATGTTCCCGTATGGAACCCTCGAATCGAAAGCGAGCCTCATGAGTCCTAGGAGATACGATGCTATGTGGTGCGTTATTATGTTCGACCTGCCTGTTCAGACGAAGCTGCAGCGCAAAGAGGCAAGCAAGTTCAGAAAAATGCTCGTCGATGCCGGATATTCTATGATCCAATTCAGTGTTTACGGGAAATACTCGCCTACCACCAACGGCAACATGAGCTCGGAGCGGTCAATAAAACAGAATCTTCCCGCAGATGGGGAGGTAAGAATATTTCATCTGACAGATAGCCAATGGGCTTCTGCTACTCGATTTCGCGCGAAAAAGATCGAGAGAAATGAGGAAGCGCCGGATCAAATTGCATTGTTTTGATAGCGATTTCTAGCCTCCCTGTAACCGAAAAACAAGTGAAACACCAGATGGTTGGATCAAAGCTGCTCGAGGTGGTTCGGTTTAT # Right flank : CGACCGATCGAAGGCCCATATTGGGAATCACCCGTTTTTCATCCGGAATTGATCGCTCATGTTTGCGATTTGTCTCTAGTGGATCGAGTTCCGTTACCCCAGATCCAACCCGCCGATGACTTCCTGCAGCGCTTTCGCCGACGCTTGCAGCCTTGCCAGCTCGTCGGTCGACAGCGGGCAGGGCACCTGGTACTCGATGCCGTCCTTGCCCACCACGGCCGGCATCGACAGCACCACGTCGTGCAGGCCGTGGACGCCGTGCTGGAAGTTCGACACGGGCAGGATGGGCTTCTCGTCGCGCACGATGGCCTCGCAGATGCGCTTCACCGACATGGCGATGCCGTAGTAGGTGGCCCTCTTCTTCGCGATGATCTCGTAGGCGCTGTTCTTCACGTCCTCGGCGATGCGCTGCATGGACTCGTCGTGGTCGAAATGGCCGCGCAGCTCGCAGAAGTCGTTCACGGGGATGCCCGAGACGTTCGCCGTGCTCCACGCTGCGA # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAACCACTCATTTTCCCATCTGATACACTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //