Array 1 419561-418983 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACGWX010000001.1 Yonghaparkia alkaliphila strain DSM 19663 Ga0197549_01, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    419560	    29	 100.0	    32	.............................	TGGCGACTCGTATGTTGTGTTGTCACCCGGAC	
    419499	    29	 100.0	    32	.............................	TCCCGCAACCGCTGCCCCACCGAAGCAAGATC	
    419438	    29	 100.0	    32	.............................	AATTGGCCGCGCAGCAATCCGCTCAGCCAAGG	
    419377	    29	  96.6	    32	............................T	GGTGGCAGTCAGGGCCAGCTGTGGATGATGTC	
    419316	    29	  96.6	    32	............................T	GGTGGCAGTCAGGGCCAGCTGTGGATGATGTC	
    419255	    29	 100.0	    32	.............................	TGGCGAGTAGCGTCCGGCCCCGAATAGTGGGC	
    419194	    29	 100.0	    32	.............................	GACTGGCCGGAATGGCAGCAGCTGATCGACGA	
    419133	    29	 100.0	    32	.............................	CCCAGTACCGAGATGCACAATGAGTCGCATGT	
    419072	    29	 100.0	    32	.............................	AGAGCGCGGAAGCTCGCCGCAGAGGGTGGCGC	
    419011	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        10	    29	  99.3	    32	GTGCTCCCCGCTCGTGCGGGGGTGATCCC	                                	       

# Left flank :   AGCGAACTCAACGTCGTGAGGCTGTGGGACGGCGCGGAACGCAGTGTTGCTGCCGGAGTGGACTATGGATAGGGGGGTGCCATGGTCGTGATCGTCGTTACCGCGTGCCCCGCAGGACTGCGCGGGCACCTGACACGGTGGCTACTTGAGATCAGTGCAGGCGTATTCGTCGGTCATGTGACGGCGCGAGTGCGCGATCTCCTGTGGGAACGCGTAGTCGAACTGGCCAAGGACGGCAGAGCGATCATGATTCACTCGGTTCGGGGTGAGCAGCGGCTCGCGTTCACGGTCCATCGGCACGATTGGATACCCGTCGACCTGGACGGAATACAACTCATACTTCGGCCCGCGGCAGGGCATCGGAACCCACCACCACAGCTCAGGCCCGGCTGGAGCAACGCGAGCAAGAGCAGAATGCTGGCTCGCCACGCGAAACCTGAGTCACACGAGAAATGAAACGGCAAACACGCACTCGTTGGTAAAATCGCTGATCAGGTAGA
# Right flank :  AACCTTGTGGCGATTCGTGCGGAGGCCGAGTTGTGCTCCTGTCGCGCGTCAGAATGTTTGGCAGGGGTAGTTAGTTGCTGATGCAACGCCCCAGCTGAAAGGTCTGAATGTCATGAGTCGTCCCCCCACGATCCCCGCGGAGAAGAAGCTCCGCATCGTGTTGTCCGTGCTGCAGGGCGAGATCACGATCGCCGAGGCAGCCCGCCGTGAGAAGGTCTCCGAGCAAGCGATCGGGAACTGGAAGCGCCAGTTCCTCGAGGGCGGCAAGGCTGGGATCGAGGCGGGCAAGTCCAAGCCCTCGACCCGGGAGCAGCAACTCGAGGACGAGGTCGCCGAGCTCACCCAGGCTCTGGGTGAGGCAGCGGTTGAGATCCGCGTCTGGAAGAAGAGCGCCGAGGGCCGCTTGGGCCCTTCGAGGACCTCGAGGTGATCCGCGTCGAGGCGGGCATGTCGACTTCGAGGTTCTGCCAGCTGATCGACATGCCCGAACGCACCTGGCG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCTCGTGCGGGGGTGATCCC
# Alternate repeat :   GTGCTCCCCGCTCGTGCGGGGGTGATCCT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTGCTCCCCGCGCATGCGGGGGTGATCCC with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.30,-13.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [41.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.14   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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