Array 1 86541-86303 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTU01000001.1 Paenibacillus peoriae strain FSL R7-0131 NODE_1_length_1316712_cov_1.63065_ID_3971, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 86540 34 100.0 36 .................................. AAATGTGAATTTTGCATCGTTGTACTGGCGTTTTTC 86470 34 100.0 34 .................................. ATCATGCTGCCTCATCCTCCTGTGCTTTCTCCCA 86402 34 100.0 33 .................................. TGCCCTCCAGCGTTATAGTTTACCTCAATGACA 86335 33 79.4 0 T..........A....-...........G.T.TG | ========== ====== ====== ====== ================================== ==================================== ================== 4 34 94.8 35 CGTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : TGCAGCCGGTATGATGAACAGGATTAATAACTCAACTTTTGCCGAACGTTTTCATAAAATATTTTACAAATACCTTTATGATTTTCGAAAACATAAAGGTATTTTTCTGATCAATGTAGTGGATATTTCCGGATGTATTTACCCAAAGCCAGAACGTTCAGCTTTGGTGTTAACTGGTGGAACCCTGCTTTTAAAAGCGCTATCGATGAATTAAATATATTCGAATGTGCGCTTCCTCCTTCACAGGTGGCAGAACTGGCAGAGGTGAAATAAGTCCAGGCAGGTATTTGTTGCTAAGCCAAAAAGCGAGTCTGTCCAGGTGCGAATGTGAAGCTCACATGAATTCTCCGAGAGATTCGCACCTCAGATTTTGTCGAATTATATCGAATGTGAACAAATTTTAAACGATTGCAAGAGGATGAGGTAATATTAGATGCGTTTTTGCCAAAATAACGCTAGAATGTTACTTAAATAGGGGGCATTTAACCCATTTTCGCTGT # Right flank : AAAAAAGAAGTCTTGTTTCGTGGCCTGCCCAGAAGTGAATAGTTGCAAATCTCTTTTTAACGGATTTCTCATTCGACAAATTCTCCCTTACTTTTATACAACAAAGAACTAACATTTACTATGTTGAAGTATAAAATAAGGTGGGAGTTGCTTATGAGGATTTCCATGAGTAAGTTTCTAAAGCGTTATGCAACGATTCTATTGAACTACGCAATAGGTATAGGGGTATTTTACGCTTTGGGATATCAGATGAGCGCTATGGGAATCTATGCAATCCTGACAGGAATTGTGACTGGAGAAATAATCAACTTGGCATTATCAAAGCGAGAGAAATGAACCTATGTATCCCTTGATTACATCAAAATCAGGGGATTTTTCATTTGATTAAAAGGTTCAACAGAGTTATTACCTGGAAACTCTATATCATTTACTAATAGTAAAGAATATGGAGAAATGAAATAGTCATGTCAACTCTGTGAAACCTTTTGTTTCGGCAATCC # Questionable array : NO Score: 8.60 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 2 91533-91101 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTU01000001.1 Paenibacillus peoriae strain FSL R7-0131 NODE_1_length_1316712_cov_1.63065_ID_3971, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 91532 32 100.0 34 ................................ AAATATTTTTCCTGGGCGCTTGTGTCCAGGCCAG 91466 32 100.0 34 ................................ TCTCTTGAACACAATATACCATGTTTTGAACACA 91400 32 100.0 36 ................................ TCATTTGCTGATTAGGGTACCCGTTAATGATTTCAG 91332 32 100.0 34 ................................ GATTCTGAACGCGGTAATACTACGTAAATCACCA 91266 32 100.0 35 ................................ CGACGCCGAACGGGAGTAGGTTATGTTACCGTCCG 91199 32 100.0 35 ................................ ATTTCCTCATACTCCGCATCAATAATGGTTGCATT 91132 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 100.0 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TGTCCTGTTTTTGATTAACAAGAAAATGATTAGATAAAGGATTTTACAAAAAAAGAAAATGGGCTGTCATGATGAAACGATGATATAAGGAAAATCGTAATGAAGGCATGGTACAATGAAACAGGATAGGATTATGTATCTCTATTTGAATGTATTTTGGATTTGCCCAATTTAGACGTTTAAAGTATGAACTAGAAGAATTAATAGACGAAAGAGAACTTAGCCTGCATTTCTACAATTTGGGTGATAGTTATAAAAAGAAGAAGAGCATATAGGGGCTAAGGAAGCTTCCAATATGGAAAGCTCACTGATTTTATAAGGTGCGAATGTGAAGCTCACATGAAAACCCCGGGTCCTTCGCACCTCGGAATTTGTCGAAAAGTATAGAAAATGCTATCAGTGAGAAAAAGTCAATGGTTAATTTAAGCCTTTTAGACATTGCTTTTTTCGAAAATGCATGGAAATGATATCATTAGATAATCAATTACTGCATTTTCGCT # Right flank : ATGATGAATGGAGGACGTCCTCAAGAAAGAAATAGGCGCACTCCATGTGACAATTGACGATGCGGCAGGATTCACGGTCAGTCGTTACGGCATATGGTTTTGTTTGACTGGTATGCTTTGCATAGTTCTCAGGGCTTCAGCCGCAGAAGGAAGAAAATAAAATCGAAGTGAAACGATCTTTGTGATATGTACAATGCTCGCAATGGGCGCGATGAGAGGCAATGATGCGGGGGAATGAGGCAAGAATATGAGGGCGTACAGGGGATAAAATGCGGAAGAACCACCGAAGGATGAAAAATCCAGTGCGGTGGTTCTTTTTTTTCACTCGTCTTGTATGCCATCATTATAGGGGGAGGCGATGAAGAATGTTCCAGGATTTCAAGCTCGTAAGTGACCGCCCGGTCTCGATACAAGTAAAAGAATACGTCAATCGTTTAATTATAAAAGGGGCGCTTCAGGCGGATCAGAAGCTGCCTTCCACACGAGAAATGAGCGTTCTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 98232-96346 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTU01000001.1 Paenibacillus peoriae strain FSL R7-0131 NODE_1_length_1316712_cov_1.63065_ID_3971, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 98231 33 100.0 36 ................................. GATTGATCTACGATGGATACGGTCTTTGCGCTCAGC 98162 33 100.0 34 ................................. TACGGAGCTAACCGTACAGGACGTTGGGCTGGTC 98095 33 100.0 36 ................................. AATCTCTTGACAGGATGCGTCAAGGCATGAGGAGCC 98026 33 100.0 36 ................................. TTGTTCTCCAGCACGGACACCCTCGCCGTGTTTTGC 97957 33 100.0 36 ................................. TTCCCCGTAAAATGCGAACCAGTCCCGCATGGTCTG 97888 33 100.0 35 ................................. TTCGGTGGTATGATACAGCCCATTCACCAGGGCCA 97820 33 100.0 35 ................................. ATTATGTGGAGTCTATGGGCGAAAAGTACAAGCAT 97752 33 100.0 38 ................................. AACATCATGCTGCAATCCTGCTTTGTTCCGAACCCGGA 97681 33 100.0 34 ................................. TATTTTTAGGATTAGGCTTTGCCCAATGCTTTAT 97614 33 100.0 36 ................................. AGATGATCACGCAAATGCTTGGGGCTATCGAAAACC 97545 33 100.0 36 ................................. CTAATCGTAAACAGGAGGAACCCTCGGGAATCCTAG 97476 33 100.0 35 ................................. AATGATTTACTTTAAATAGACATCTCTACTTTTTC 97408 33 100.0 35 ................................. TGATCCTGTATAGAAAATGATTTTGGCTGTACCGG 97340 33 100.0 36 ................................. AGGTACTATCCCACTTGGTACGTATGTGAGGGTAAG 97271 33 100.0 37 ................................. ACCTGTCAGACAACAATAGCGACGAGGCGTTTTTCAA 97201 33 100.0 33 ................................. AATCAACCAAATCAACCAGCCAAAAGGGACAGA 97135 33 100.0 35 ................................. GCCAGCGTCACTCCACTCATTATCATTCGCCGTCG 97067 33 100.0 37 ................................. ACATCTGCCAGCGCGACAGAGTAATGACCTTTCAAGG 96997 33 100.0 36 ................................. ATGAACACCAGCGATCATGGCTAAGTCGGCGTCACC 96928 33 100.0 34 ................................. ACTCATAGCTGCACCTCATAGTCGCCAAACCATC 96861 33 100.0 36 ................................. TGATCCTCAAGCAGAAAAATGAGTTTTCGGTATGTC 96792 33 100.0 35 ................................. TTACTTAGTGCCAGCGGCCGACTTACCTTTTTTAA 96724 33 100.0 35 ................................. AGGACGGTGACTCCATCCCTAAGCGCCATCCCTGA 96656 33 100.0 38 ................................. AGTTTGTTGTGGTGCTGCTGTTACTTATTGGACTTGGA 96585 33 100.0 38 ................................. GATTTCCCTGTATGGCATCGCGTGATACTCGACACAAT 96514 33 97.0 34 ..............................G.. GATATGGGGAAGGATTACGCAAAATTTTCAGGAG 96447 33 100.0 36 ................................. AATATCGGTACTGGGGATATCGTCACTTTAATTGAC 96378 33 97.0 0 ......................C.......... | ========== ====== ====== ====== ================================= ====================================== ================== 28 33 99.8 36 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATCACGTATGATGTAAGTACAGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGCGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATTTTGGACTCGACCCAGTTCCGCAGCTTAAAGTATGAACTCGAAGAATTAATAGACCCAAAAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTACAAGAAGAAAGTAGAACATATAGGGGCAAAGGAAGCTTATGATATGGAAAGCCCACTGATTTTGTAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCGCGAAATTTGTCGAAAAGCAATTAAATCAGTTACCTTCAGTAAAAGTCAATGGTTGACTCAAGCCTTTTTGGCATCAGTTTTTGCGACAATGTGTGGAATTGATATCATTAGGGTATGAATTCCTGCATTTTCGCT # Right flank : TTGCTAGGACTTGAAGAATTAACAGTAGAAGCTAAAGTCGCACTCTATATGGGTGCGTGTTGGAGACGTAGTATATTTCATAAGGAGGTTTTGTATTGGCTCCGGCGCATTATCGCTACTTTTTGGAGTAAGGAAGAAGACAATGACGCTTTTGAGGCAGGTGTTCAATCTCTTCTAATGAAAATCTCAGAACAATACAAACTAACGTATGGCGAAAAAACACAGCTGCTTGCTTCAATGATACTAGAGTATTCGAAATACGTAATAAGATGGGAACGTCACAGTACAATGGATGAAGAAGGAATGTGGGAGTAATTGAGACAAATGCGGCACTGGAGTTGAACGAACTGGACTTGATAGAGGAGAGGAGGAGAGAATGAAAACTTCTGTATGGCTACATAATTATACTCAATTCACAGCCCTAGGACCTATTAGCACCGAAAACAGTACCATTTTGCGTGGCTCTAAGGGGGGAAGAGCAGCCACCTTAGAGCCAGTAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 4 108690-106906 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTU01000001.1 Paenibacillus peoriae strain FSL R7-0131 NODE_1_length_1316712_cov_1.63065_ID_3971, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 108689 32 100.0 34 ................................ CGTCGTAATCACCGCAGCGCAAACGTACATTGAT 108623 32 100.0 40 ................................ TTATTGTAAGCCTGTTTGCGCTTTGGTTATGAGCTTTCCA 108551 32 100.0 36 ................................ GAGCTTCAAGTCCGGCAAGTCTCAACGTTTCAGAGC 108483 32 100.0 34 ................................ CTTGGTTGTCTTGCAACCACTGTCCAAGCTTATT 108417 32 100.0 35 ................................ AGCAGCCCCAGTGTTACAGTCACGCCTAGCGTAGA 108350 32 100.0 34 ................................ CTGGTATGTGGCCAAAACGTCAAAAGGCGTATGA 108284 32 100.0 35 ................................ CCCCGTGACGTCCACTAGGCCCGTGCCTCGTTTTA 108217 32 100.0 34 ................................ AACCATGCAATTTTACGCCATCGCGGGCCACGTT 108151 32 100.0 35 ................................ TATACTAGAAAGGGAGCTGCAAGGAGCTTTTACAA 108084 32 100.0 35 ................................ TCAGCTCTGCGAGAATATCACGCTTGTTCGTCCGG 108017 32 100.0 38 ................................ CTTGGTGAGTACACGCTCGCCCTCATGCAGCTCAGCGA 107947 32 100.0 35 ................................ CATCGGGTAAATGGTCTTTGTGTAACTGGCTAGTT 107880 32 100.0 32 ................................ ATCATAGTTCCAGGCATCGTATGTATACCAAA 107816 32 100.0 36 ................................ AGGCAAGATTTTAAGATTGTGTAAGGTCACAGTCAC 107748 32 100.0 36 ................................ ATACCATCGCTCCTTTTTTTTATTTTTTTGTTAATC 107680 32 100.0 33 ................................ ACACCATCCAAGCTCCTCACCTCAGCCTGGAAG 107615 32 96.9 33 ..............A................. ATTGCTGTTCACCTCCCCTCTTTGATAAAAGTA 107550 32 100.0 34 ................................ AGCCGCCTTGACTGCACGCTGGATTAGGCGCTCA 107484 32 100.0 37 ................................ ACGAGACTCAAATTCATTAGCTATGATCCGCGCAATC 107415 32 100.0 37 ................................ ATTGAAAAAAGCTGTTGTTTTATTATCTGGAGGTCCA 107346 32 100.0 37 ................................ TTAACGGTTCTAATGATACTGCGCTTTTTACCTTCTT 107277 32 100.0 32 ................................ CAATCCCGAAACCAGACTTTTGAGCAATTAAA 107213 32 100.0 37 ................................ CCTCCGCGTTTTGGTCAGACGGCGCAGCCCTGTAAAC 107144 32 100.0 36 ................................ ATTGATTACCTGGGTACACCTGACGGGCTGTATGAG 107076 32 96.9 35 ............................G... TTCTGTTCCTTGAAAAGCGAGATTGATAGAGTTGT 107009 32 81.2 40 ........T...A...A...A.AT........ CGTCCAAAACAAGAGATAACCAGAGCAGAATCTGCGGTCG 106937 32 71.9 0 ...AT.....G.A.T..A.T.......A.T.. | ========== ====== ====== ====== ================================ ======================================== ================== 27 32 98.0 35 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : AGTTCCGTATTCGTGTGAATGTCATCTATCCGGGTGCCATTTCGACGAATATTGATGAAACCACGGAGAAATCGGAAGGGTTAAAGCAAATTACCATCCCCGTCAAGTTTCCCGAAGGAGGGCAACCGTTGGCTGATGGGCCGGGTCAACCCGAGCAGGTAGCTGATTTGGTGACATTTTTGGCTTCTGATCATTCGCGTCACATTACTGGTGCACAAATTGTAATTGATGGGGCAGAGTCGTTATTGTTTTAGAAAATAGAGCATTCTCTGGGACAGAGAAATGTTTTGTGGTATCCTGAGTGTATTGTCTTGGTTACGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAATGGATTCGGATTAGCTTTCTTCGTTAGAAGTCAATAGTCGATTCAAGCTTTTTTGGCATCGTTTTTTTCGAAAATGCATGGAATTGATATCATTAGGGTATGAATTCCTTCATTTTCGCT # Right flank : ATATAAAGTCCGCTCAGTGAGGTTCAAACAGAAGAAACGGGCAGCATTCAAATAGAATCTTCAGGAAGCTCAAGATAACAGCGAGGGAAACTCGCGTCTTACATTTAAATTCTATCCTGTAGATATTATGAATCCTCAGAGGAAAGACTCTGGGGATTTTTAATTTTTGTAGAGGACGAATAAAAGAGCGGTACATGCTCCTTCTCTATGAATAGTACCGCGCTGCTACAAGTTTTTTTATGTTAGTCAATTTATCTGTTAATTTGATTTTTTTAGGAGGTATTTGTCATTGGAAGTCGAAATAAGGTAAAAGTAAATAAGTCTTTATTCCTTTTTTGTTATTTTGTTAGTAAATAAGACTTGGTTCAGGAGGCACTTTAAATGAAATATATAGCTCACATTCGTCAGAAAGACGGACGTATTCAGACAGTGAGAGATCATCTACAGGAAGTGAAAGAGAGTTGTGAGCATTATGGAGGGAAAATTGGTGTCGGTCATTT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //