Array 1 2193508-2195367 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015518.1 Syntrophotalea acetylenica strain DSM 3247 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2193508 29 100.0 32 ............................. GCTGCTGGGCAAAAGGCTCTTCTGAATCGACA 2193569 29 100.0 32 ............................. GTTTTCGCCGCGTCCACGGCCTCCGCATAGGT 2193630 29 100.0 32 ............................. AGGTTCGAGTGGCAACAGCCCATTAAGTACAC 2193691 29 100.0 32 ............................. GTTTGCCACTTTAGTGGGTATTCCGAAATAAT 2193752 29 100.0 32 ............................. ATAGCCAGTGATAAGACCATCATTGTCATCAT 2193813 29 100.0 32 ............................. ATATGATCTTCTTCGCCGTTAACTATTGATCC 2193874 29 100.0 32 ............................. TTAACCACTGCATCCCCGTTGGGCAAAAACCG 2193935 29 100.0 32 ............................. CACGATTGGCGGGATAGGGAGTATTACAGGCC 2193996 29 100.0 33 ............................. TAGATGCAACGGTTCTCCGCGTTTGTCCCCGCC 2194058 29 100.0 32 ............................. ACATTGTTCGTTGGGCATTAAAGCGTGGTAGG 2194119 29 100.0 32 ............................. CGGGGTGATTCCGGTAAATTGGGAGGTGTCGA 2194180 29 100.0 32 ............................. GCCGGGGCATGGCACGAAGGCGTGAGATTAAA 2194241 29 100.0 32 ............................. TGAGGTAACTGTGCAGCTGCTAAATTGCACCA 2194302 29 100.0 32 ............................. GTGCCTGATGCAGATCAACGTTGAGATCCCTG 2194363 29 100.0 32 ............................. TTGCCCCGGAAGGCTTTCGCGCCGAAATAGCT 2194424 29 100.0 32 ............................. GAGGATGAGCGGCATGCAGCATACCAAGCCAG 2194485 29 100.0 32 ............................. CTGTGGCGCACAATACGGCCTGTGCGTGGTTT 2194546 29 100.0 32 ............................. GAACAGGGGTATCGGTACGTCTATGCCGCTGA 2194607 29 100.0 32 ............................. CCTGCTGTAGTTTATACATTTTCGGCCCACAT 2194668 29 100.0 32 ............................. CAGCCCACGAAACCGCGCTGGCCGAACATGCT 2194729 29 100.0 32 ............................. ACAACGCCCGTTTAACCAGTCCGGTTGATTTA 2194790 29 100.0 32 ............................. CGAGCGGTAAAAAAGGTGGGGCTGGCGGGGAG 2194851 29 100.0 32 ............................. CCTTTCGCAGTATGCAGAACGTCGCCAGCGAT 2194912 29 100.0 32 ............................. CCGTTGCTGTAATAGGTGGTGTTGGCGGCGTG 2194973 29 100.0 32 ............................. CACCTGAGACAGCACCGGCAAATGAGCCCGCG 2195034 29 100.0 32 ............................. CCACACCTTGCCGCCTTGCGTCGCGGCCTGCT 2195095 29 100.0 32 ............................. GTCTTGACCCGCGTGCCCCACACGCCGACCAC 2195156 29 100.0 32 ............................. TATTTTGGCTGGCGCGGCCTGAAAATTTGGTG 2195217 29 100.0 32 ............................. AATCGCTAAACCTTGCAAAAAACGGCTGGCAC 2195278 29 93.1 32 ....C.......T................ CCGGTGTGTCGCGAGAGGACGCAGAGCAAGCG 2195339 29 96.6 0 ..........................G.. | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.7 32 CCGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GCTTTTGAGCCGTATCATTCCAGCCATCGAACAAGTGTTAAAGGCAGGGGATCTGGAAGTTCCAAAGGCCCATGCAGAGGCCGTTGAAGTGGCGATCCCCAACAAGGAGGGCATCGGCAATGCTGGTCATCGTGGTTGAAAATGCTCCTCCGCGTCTACGGGGGCGATTAGCCCTTTGGCTGTTGGAGGTTCGTGCTGGTGTCTATGTCGGAAAGGTATCTCGACGCGTGCGGGAAATGATCTGGGACACGGTTGATAAGGGTATCGAAGAGGGCAATGCCGTCTTGGCCTGGAGTACCAATACCGAATCCGGTTTCGACTTTATGACCCTTGGTGTCAATCGCCGCATTCCAAAAGAAATGGACGGAGTAAAGCTTGTATCTTTTCTGCCGGAAACCCCGTCAGGCATACAAAATAGCGGTGGCTGAAATTTAAGCAAAATCGGTGGTGATTTTTTCTTGCAAGAAATAATCATATGATTTCTAGTAGATAAAGATAGT # Right flank : GCCCGGCAAAAATGCCAGCGCTGAGGATATGGGATTTTGGACGAAAATGCCTGTTTACCACGGCACCGTCTCGGACCTGGACGCGTTTACCTTCGGTCGCGGCGGTACTGTTTCGGGTAGCCCGGTTGGTACTTTAGGGGTTTCGGTCGCTCTAGACCGAGAAGTAGCCGAAGAGTTTGCAAAAAAGTCTGCCCAGGGGGGAAGCCGGACCGGTCCAAAAGCATCGGGCCGCAAAGCCAAATCGCAACCCGACGGGGTAGTGTTAGACTTATTACATCGCGCAGAGAAACCCGCATTGATAGACCTCACCGGCGGAGAAAACGATTATGACGCGATCATGCGCGGAAATTGTACCACGCCGGGCGGGTTGTTAAAGGGGAAAAGTTTATCCTGATGAAAGATCAGGCGCAGCTAGGCAAAAAGCAGGGCGGACACATGGATCTGCCCCTACGGATGGAACATTGTGCCGGCCTTTTAGGTGGGCGATGCGGACGAAGGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //