Array 1 65811-63323 **** Predicted by CRISPRDetect 2.4 *** >NZ_SEZL01000015.1 Aliivibrio finisterrensis strain A37 NODE_15_length_105354_cov_126.188, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 65810 28 100.0 32 ............................ ATGGCTAGGACCAAGCACAGCAAAGGCTTATG 65750 28 100.0 32 ............................ ACTAGCGCAAATTTGGACAATTTCCGCTAACC 65690 28 100.0 32 ............................ TTGTGTTTAGTTGTTGCAATAAGCTCCCTAGG 65630 28 100.0 32 ............................ ATTCGAGCAGCTTGAATGTACGCCTTATGTCT 65570 28 100.0 32 ............................ TCCTCTCGCAAAATTAGCAATTGCTAATTTAG 65510 28 100.0 32 ............................ AAGAAAACAGAAAACAGGCCAAAAACGGTTGA 65450 28 100.0 32 ............................ GTTAACTAACCATTGACCCTCAAATCCTTTGT 65390 28 100.0 32 ............................ AAAAGCCACGTAGTGTATGACCAAGAAATGGC 65330 28 100.0 32 ............................ GTTCAGCAATAAATCAATCGCACGACGATATT 65270 28 100.0 32 ............................ AGAACGGTATAAGCAATATCAAACCCATCAAC 65210 28 100.0 32 ............................ TGACGTTGGTAAATCTTGCTTGTTACTGGGTA 65150 28 100.0 32 ............................ ATGCTCATGAAAGAGATTGCAGCTAGGTTATA 65090 28 100.0 32 ............................ ACGTTGGAGAAGATGACTCTTATGTTGTTGTT 65030 28 100.0 32 ............................ GAGAACTACGCATAACCAGTACTTATCTTTTT 64970 28 100.0 32 ............................ TACGATTTTCATTTTAACGCCACATTTTCCAA 64910 28 100.0 32 ............................ ATGGAAAGTTTATGGGAACTTGGTTTGATTTC 64850 28 100.0 32 ............................ ACTGAGAAATTCAAAACTTGCTGTGGAAAATG 64790 28 100.0 32 ............................ CTTTAATTTCTTTAATTGGTTACATAACCCAT 64730 28 100.0 32 ............................ TGAAGCTTAAATGGTTATAAGCAGTCGCCTCA 64670 28 100.0 32 ............................ TAGCACTAAATAACCAAACAATGAGCAGTCGA 64610 28 100.0 32 ............................ TATTAATTCGTGATGGCCGTTAACTTGAGTGT 64550 28 100.0 32 ............................ TTCTTAGGGAATCCATTCAATTGGATCATTAC 64490 28 100.0 32 ............................ TTGTTCGCCCCCTTACAAATGAATTTGAAAGC 64430 28 100.0 32 ............................ TCTCATAATGCGCACTTAGCTACGGCTTCTTT 64370 28 100.0 32 ............................ TTTGGAGAACGGCCGCGAGGATTTAATCTAAA 64310 28 100.0 32 ............................ ATCCAGTACCAGACACCAGAAGTGACGTAGTA 64250 28 100.0 32 ............................ GGCTAAAGACGATCCACCACTTGTTACTCGTT 64190 28 100.0 32 ............................ TAATTCTCAACATTTCTGTCCTTACCCATCCA 64130 28 100.0 32 ............................ TTGCTGATAGATCAGATGATTTATCAACCAGT 64070 28 100.0 32 ............................ TTGACTACTACGTAGAATTTAACAAAGTTAGA 64010 28 100.0 32 ............................ GACAAGTGTGTAAGCTCGGCTGAATCTTGTAT 63950 28 100.0 32 ............................ CGCTACACGGTCAAGCAAAGGGTAGTGATGGA 63890 28 100.0 32 ............................ ACACTCAATCTGGTCTATAACCATGTTATTTT 63830 28 100.0 32 ............................ AATCCAAAGCGCAATGAAATCGGTATTGTGTG 63770 28 100.0 32 ............................ ATCAACTTTGCATCGATAGCTAAAGTGAATAC 63710 28 100.0 32 ............................ TTCCACAATGAAGATGATCGAGAGTTAGATTC 63650 28 100.0 32 ............................ TTGAGTTAATCCGCTTGGCAATGCTGCTGGAT 63590 28 100.0 32 ............................ AAGAAAACGAGATCCGATAATTTCATCACTCA 63530 28 100.0 32 ............................ AATAGACAGGCGATTGACGAGAACCAACCGAA 63470 28 100.0 32 ............................ ACCAGAAAAACCAAATAACATTATCTATATCC 63410 28 100.0 32 ............................ TAACATCCCGTAAGCCAACATGGCTCTAGAGT 63350 28 75.0 0 ...........TG........AA.AG.G | ========== ====== ====== ====== ============================ ================================ ================== 42 28 99.4 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGAAGCAGTTATTTGAGATAAATTGGCTGAAAGGCTTACGTGATTATTGCTCTCAAACATCAATTTCATTGGTTCCAGAGGGTTGTCAATATCGCTGTGTAAAACGCAAACAAGCTAAAAGCGCTAATAATAAACGCAAGCGTTCTATTGCTAAAGGTTGGTTGAGTGAAGAAGAAGCGACATTGAAAATTGGTAATGAACAGCAAAAAATGTTGCGCTTACCCTTTGTTCAATTAAAGAGTACATCCACAGGACAGGTGATGAAGTTATTCATTGAACATGGTGGATTGCAAGATAAAGCGGTTGAAGGTCAGTTTAATCGCTATGGATTAAGCTCATCAGCAACGGTCCCTTGGTTTTAACCCAAAATAACCAAAAAAATGGCTCTTTAAAATGAAGTAATAAAATCAGTAAGTTACAATAGGTAGGGGAAATTAGGTAAAAATGGGTATTTTCACTTATCTGCTTGTTGTAACTTATTTTTATGCTGATATTCTATT # Right flank : TTAAGAAAGAAGTTTGATAGCTATACCTCATATACTTTTAATATTTGCGGTATGACAGCGTTGCTAGAAAATTGATCTTGAATGGTTCTTTGGGCTGCGTGTTGAATTTCAACTTTATTAATCGATGACAATTCAAACCAGTGGAGTAGGGCTTGAGAAAGAGCTTCTGGCTCGGTTATCCATCCATTCATTTCTGGCTGTATGAGTTTACTGATATTACCCACAGGGGTTGATATTACTGGTATTCCTCTTCCCATCGCCTCTAATGCCGTCATGGGGAGCCCCTCGTAGCGAGAGCAGATAATCAGTAAGCCAATATCATTCCAAATGGTGTCCATTGAATCTTGATGTCCATGAAAAATTACGTTGTTTGGAAGGTGTTTAATCAGCTCTTTCTCCATCGGGCCTGAACCATAAATATGAAAAGAGTGATTAGGGTGTTTCTTTGCTAATTCGATGAATCTATCAGGGGCTTTTTCATGGCTTAAACGACCTACAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 76683-75395 **** Predicted by CRISPRDetect 2.4 *** >NZ_SEZL01000015.1 Aliivibrio finisterrensis strain A37 NODE_15_length_105354_cov_126.188, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 76682 28 100.0 32 ............................ ATCGGAATAACAGCAATTATATTAATTTTATT 76622 28 100.0 32 ............................ AAATAAATACAAAGATAATCGCATTGACAATA 76562 28 100.0 32 ............................ TCAGTATGGTGCAACCCGCCATATAGCGATAT 76502 28 100.0 32 ............................ AGCAAGACGAAGAAGAAAAAACAGAATAAGAA 76442 28 100.0 32 ............................ ACAGTCAAAGATAAACCCACGACCCAAGAATC 76382 28 100.0 32 ............................ AAGCCGCCACCTGCTACGACAAAAAATATCAT 76322 28 100.0 32 ............................ AACAACAGTTTACCACGTTGGAGAAGATGACT 76262 28 100.0 32 ............................ TGTTAACTGGATAGCTGAGGCTATTGCTGATT 76202 28 100.0 32 ............................ ATCAAAAGAAAATAAAAAAAGATGTAAATCTT 76142 28 100.0 32 ............................ ATCTAAGTTTGATGCTAATCCATTTTTTCAAG 76082 28 100.0 32 ............................ AGAAAGGTTGATGGAGATTGGTACTGCTGCGC 76022 28 100.0 32 ............................ CACCGCCATTGGAGGGGATAAAAACTCGTAAA 75962 28 100.0 32 ............................ TCGCGCAGCTCGTCAAAAATAACAAAGTGCCG 75902 28 100.0 32 ............................ AAGCAAGTCCAATCCGTCTAGTTGCTCCGTCC 75842 28 100.0 32 ............................ ATTGACGATTTTCACGAAATGTTTGGCCGTGA 75782 28 96.4 32 ............G............... TAGACCGTAAAGCAATACCTAAGTCTGACCCA 75722 28 100.0 32 ............................ ACAAAGCATCCACGGTTCAGTTCTTACAACCC 75662 28 100.0 32 ............................ ACCGCCTCTTCAAATTGACTGACACATTCGTA 75602 28 100.0 32 ............................ TTTACTATGTTTCGGCGGCGAACCGCTAATAC 75542 28 100.0 32 ............................ ATTAAAAATTATCTCTAATCAATTTCCAAATG 75482 28 100.0 32 ............................ ACCACTCTTTTTAAAGCTAATCCTGGCAAACC 75422 28 67.9 0 .......A...C.....T..AA..ATTG | ========== ====== ====== ====== ============================ ================================ ================== 22 28 98.4 32 GTTTACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATAAAGTAAAGGGAGTTACATAACTCGCACTTAATTGCTTTTCAACCTGATCAACAAGGCGCTGTTGGTTGCACCATAAAATGCAGTTATATTTTTGGTGATTAATGCTTTTAATTAGATTGATTAAGCAGACTTCAGAACCACGGATCCAATCATCACCATAATGAACAAACAGTAAGGTTGTTTTTGTTGTATTTTCCATAGCACACCTTCCTCGCATTCTCTCTGATATAAGAGATAGAGCAAGGGCAGTGCCAGATTGTAATTGTTTTTATTTTATTGATTTTTAAAGGGAATTATTATGTGTATAGATCAGTTTTCTCAAATTGAGAATGTGGTTTTTTAAATTGGGAATCAGAGAGATAAAAAATACCAAAAAAAATAACGTTAACAATAGAATAATAAAATCAATGAGTTACAGGTTGGTTGGGAAAGTAGGTTAAAAAGTAATATTTAAGCTATCTGCTTGTTGTAACTTATTTTTATGCTGATATTCTACT # Right flank : ATTAAAATAACGAGATAACCATCATAAAATATCGATAAATATACTATTTTATTTATGAAATAGTATTATAGTAACTCTTTGTTTAATATTAACTTTATTGATAAGGCTGTTAATAGTGGAGCAACTCTCTCGTTTATCAATTATTCATAAATTACTTAGCCAATCCAAATACCCAGTACCGAAAAGTAAACTTCTAGAAGCGCTAGAGTGCTCAGAATCCACATTTAAACGGATACTTCGTAAAATCAATGACGAATTTGATGCTTCAATCTCATACGATAGAGAACTAAAAGGATATGCATACGATTCTGATAGTCATCAACTTCCATTATCGTATCTGAATTTTACTGATAAAGAATGGTTTGCCTTATTAACCGCAGAAAAACTATTTACCGATCTACATACAGGATCATTAAATAAAGAGCTAGAAGGGATCAAACACGTTCTACAAAAGACAAAAAATCGAGCAACAGATTTTGGCATCGCTAATAAAATAGAAA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTTACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //