Array 1 148631-149502 **** Predicted by CRISPRDetect 2.4 *** >NZ_FVYM01000003.1 Mycobacteroides abscessus subsp. abscessus strain 1101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================================================================== ================== 148631 28 100.0 33 ............................ GAAGAAGATCTTTTGCAGGCTGACGTCGCCCGA 148692 28 100.0 33 ............................ GCTCGCCTGACCAACCCCATCAACGACGAACGG 148753 28 100.0 33 ............................ GGAGCCGACGGCGCTGGCGGCCGGCAGCGAAGA 148814 28 100.0 34 ............................ CACCACCGCCCCGCTGTCGCCGATCTCGGTGCGT 148876 28 96.4 33 .............G.............. GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 148937 28 96.4 33 ........A................... GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 148998 28 96.4 33 ........A................... GGTGAGGGCTGTCGAGGTCGCCGGCGGCACCGT 149059 28 92.9 33 ..C..........G.............. GTTGGAACAACTTTCTGGATTCTGTCCCACCCT 149120 28 92.9 32 .............G..T........... GACCGTCGCCACCAGGTGCGAGACGCTCACCC 149180 28 96.4 34 .............G.............. GCTGCCCGCGCGCCGACTTCCCGGCGGCCGTCAG 149242 28 96.4 32 .........................C.. CCGAATCGGCGGCCGCGTGTCTGTCAGCGCCG 149302 27 82.1 33 ...T.........-.......G..TT.. CCGGGTTCGCCCGGCCACCCGCACCGGTTCGCC C [149304] 149363 27 82.1 84 G...........-T..........TT.. CGTCAGCTTGCCGTTCGCGTAGGCGAGCCACTCGCGTGCGCGGGGTGTTCCCTTGCCCGCGATCCGTGTCGGCCGCACTTACCG 149474 27 82.1 0 G..T........-T.......T...... | G,T [149490,149499] ========== ====== ====== ====== ============================ ==================================================================================== ================== 14 28 93.9 37 CTGCTCCCCGCGCAAGCGGGGATGAACC # Left flank : GAGAGCCACCGCGGCAATGATGCCCGCGGCGGCGATCTTGAGCGCGTTTCTGCTGGTCACGGTTTCGATTGTTCCAGACGATGTCGAACGAACCGCCGAATGCGATGTCACGTCCCCCGTCCGGATGTCTTGAGCGGGAGCCGGATTCATGGACGTACCGCCTCGGCGAGGCGCCGCTCCACGGCGCGGAGGTCATCGATCGCAGCGGTGAAGTTGGCCCCGTCGGTGCCGGTGCCGTGCGCGTGTTCCAGGAGCTCCACCACGCCGCGCAGACGCGTCTGTGCGCTGCGCACATTGTCGTGGATCGACGTCGCCGGGCTGGTGATCAGGTCGCGGTAGTCGGTACTCATGCCCGACACGGTGCACGCCCCAGCAGCGAGGTGACGCCCGCGGCGCGGGTTCGGCAGGTGCGCTCGCCATGCTCGCAGGAGGTGGCGATTGTTAGCTTGTCACAGGTGTCAAACTGGGCACTCGTGCTGTATCGTCCCAGGTCAGGAAGT # Right flank : CGTTTCCATTCTCTGTTTTGGAGAATGTTTCCGCTGGTAGAGGCGCTGCGGTGAATGCGCGTCCTCCTTGACGGCGTTCGCACAGATGTGCACAATCGGTTCAAGTCGCGATCCGAGCGCGACGGCGGCCTCCGGGTCGTTCAGGGCACGTGCCGCATCCGCCGGACACGCCGCTCAGCTCCCGCCCTCGGACCAGGGACTGCTGAGGGTGCACCCGGCATCACCTTCTTGTGATGCCCAGGAGTGCGCCCATGAGTGCCAACATCACCCTTCTCACCATCGACGCTGCTGCTGCGCGCCGCGGCGTTCATCACTCGACTATCCGCCGCTGGATCCGCGAGAGCCTCCTCCCGGCTACCCGTCTGAGCGACGGCACCCTCCGCGTGACCGCGGCCGACCTCGACGCGGTTCGTCCGCCGGAACGGGTGAAGCCCCGCTCCGGTGACACCGTGTCGACCCTGCGCGCGATCGTGAACATGACCGGCGGCGCGATCGAGGAC # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCAAGCGGGGATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //