Array 1 1138584-1139994 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFRR01000003.1 Acinetobacter haemolyticus strain NCTC10305, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1138584 30 93.3 30 ............................AA GATTAGAATAAGCATCAAGCCGACTAATGA 1138644 30 96.7 30 .............................C AAGTAATAACTTAACACCCTCAACAGCTGC 1138704 30 100.0 30 .............................. CTCGTCATGAAGGTTTTGGAGAAATGCTTT 1138764 30 93.3 30 ............................AG AAAGCGTGGACTCCCCGAAAGTCGAATTTT 1138824 30 96.7 30 .............................C TTAGGGCATCAAATAAGCTATGAGTTGCTT 1138884 30 93.3 31 ............................GA ACGATCCAAACAATAACAATCCTAACAATCC 1138945 30 96.7 30 .............................G CACCAATTGCACCTGCACCGATTGCTGTGT 1139005 30 93.3 30 ............................AC CATATATGCCTAAAGAGCATTTACACCTAG 1139065 30 93.3 30 ............................AA TCAAAAATCTATGATCAATGCACCAGTCGG 1139125 30 96.7 30 .............................A CCCGCAAAAAAAATTTGTTATATGCTTATT 1139185 30 100.0 30 .............................. CATTCGATCTAATATCGGGTCAAAAGCTAC 1139245 30 100.0 30 .............................. GAGGAGTCTGTCTCCAGTCACAATCTTTCG 1139305 30 100.0 30 .............................. TCGACGGAGTTAGAAGTTAAATTTCTTAAA 1139365 30 93.3 30 ............................GA CAGAAAGAAATCGCGAATTAATTTCTGGAT 1139425 30 93.3 30 ............................GC GAGTTTATTAACCGCGATGAAGCTGGCCGA 1139485 30 96.7 30 .............................G TTTAATGCGGGTCTCTTGCCAGTTTAGCGG 1139545 30 96.7 30 ............................A. CATCAATAGGAGATTTTAAAATGGCTAATA 1139605 30 93.3 30 ............................AC AGATACGCACCAACTTTGAAAAAGTTTGCT 1139665 30 96.7 30 ............................G. TAATTTATTAGATCAGCAACTAAAACAAGA 1139725 30 96.7 30 T............................. AACTACACGTTCAGTCATGGCAGCCACCTA 1139785 30 96.7 30 ............................A. TACCATCACTGCCACCAGTGCCGTTGCCGA 1139845 30 100.0 30 .............................. TGAACGACAAATAGAAATCTTTCATGTGAT 1139905 30 90.0 30 ........................T...CA TCATAATGACAGAAGGCGAGTCACGGCGAG 1139965 30 83.3 0 ........T.A.............A.T.G. | ========== ====== ====== ====== ============================== =============================== ================== 24 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTCAGTGGCTAGAACGATTGATGGATTATGTGCACATCATTCAGCCGCGTGAAGTGCCGCAAGCCAAGGTTACTGGTCATGCACACTATTATCGAGTCAATCCGAAGATGAGTATAGAGGAACGCATTGCTCATCAAGCACAGCGTCATAATATTCCTTTGGCTGAAGCTAAGCAGCATTTTAAACAATATGTTGAGCAACCTGTGGTTGAGCCTTATGTTAGTTTAAAAAGTCTGAGTGCTAAACGTGAGGAAAATATAGATCGACCGTATCGCTTATATATTGGTAAGTCTGTTGCTGATGAGGCGAAAGATGGGAAATTTGGAACGTATGGGCTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTTATTCTTTAACAGCTTAATAAAATCAATAAGTTACAATAAGTCGTTTTTTGATTGGGTAAATTGCTAAAACCTATGATAAGTACTTGTTGTAACTCATATTTTTACTATAATTTTATA # Right flank : TGTAAATGGTTATTCCTAATACATTCAGGCACTTTAATTTTTAAATAAGAAAATATACCCTGAACCTAATATATTTTTAGTGAATTTTTCATGCGCGGTCTTTATCTCATCACCAATGATGATCCCATCCAATTATTACTTGAAAAATTAGAAGTTGCTTTAGCGACGAGAAAGGTTGCGATTTTGCAATATCGCCGTAAGAAAGTGGCAAAGGCAGATCAACCACGTGAAGTTGAACAGATCAAAACATTGTGTGAAAAGTACCAAGTACCTTTTGTCATCAATGATGATTTGGCTTTAGCTGAACAATTTGGATTAGGTGTCCATTTGGGGCAGTCTGATGGGGAAATAAGCGATGCTGCTGCACGTTTGCCGCAAGGTGTGATTATTGGTCGTACATGCTTAAATTCACTCGAATTAGCTGAAAAAGCAATTGCTGATGGGGCGACTTATGTTGCTTTTGGTGCAGTCTATGCCACCTCAACTAAACCTGAAGCAGG # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1413193-1412985 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFRR01000003.1 Acinetobacter haemolyticus strain NCTC10305, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1413192 28 100.0 32 ............................ CAACACATACTCATCAAGAATTACTTTTAATT 1413132 28 100.0 32 ............................ AGTACCCGAACAACACACGATCACATTATCGG 1413072 28 100.0 32 ............................ TAACTTTGTAGCTGTATCTGTAGCCATTGTTG 1413012 28 85.7 0 ........A.............C.T..T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGTAAATGCGATTTGTCTTTGTAGATTACTCACCTCAATTGTATCTGCATCCACGATCGTTATTTTGCCTACACCTGCACGAGCAAGTAACTCTGCACTTGTACAGCCGATCCCTCCAGCACCAACAATCAGTACATTTGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAATAAAATCTGACGACTATATAAATGCATTTCGTCATCAGTTAATTCAAAAGTATGTTCTAGATGATCAGACACGTTCCATGATCTCAAAATCGGCTTAACGAATGCTGATTTTAAGTGGCTAATCTCATTTAGCAAAGCATTTAATGCTTGCTGCATCATTTATTTTGACAAATCAACGGATTTACCCCAATATTTTTATTACTCTTTAACAGCTTAATAAAATCAATACCTTATGAATCAGCATAAAAACTTTGGGTGTTGAAGTATTTTTCAACCCAAGCTAATGTTTTTTCTTAATTTATTTATGCTATTTTATT # Right flank : ACAATCAAAAACAACCCACAGTACCTAGTGAAATTAATGACTTATATCGCTTTTAAATAAACAATTTGTTAAATTATATAAATAGAATATAAGAGATTTATCATGGAAAAAACTCTATTAAAGTTCATCTGTCTTATAACATTGTTAGTTTCAACAAATCCAAATATATATGCAAATGTTTACATACCAATTCCCTCATTAAAAAAGCCTAAAATATCTCCGCATATTAAAGCTCAAGCACTCAAAACGGATGAGTTTGATGTATCTACCAAACAATTATTAGAAAAAGGCTATATTCCTATTAAATCCCAAACATTTAATGGTAGAGATGATTTTAGAGGTTATGAGCACGTTGTAGCAGCGCTAGAAAAAAGAGCTGATCAAATGGGAGCTCAAATTGTACTATTTACTAATGAGAAGCCAACAGGAAGTGTAGATTATTATAGTTTCACCACTCCCTTTCCTCAAAAATCAACAATACAATCTAACTTTGATAATTC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //